iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	28.57	2.00e-30	131.00	IUUC-Hsa-046650
E3 adaptor/Cullin RING/SCF/F-box	38.75	2.00e-10	61.60	IUUC-Spo-108147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

MDVTPSPSKR KQCSSSLLSG TPGKRLLFDH SQPCSSSQVT QVQVKTGLSS QASTVDLDSS 60
IDLFDDDDEE FDNYVANLPD EVMDGSQPLP SMDRLIELDK LPDHVLENIF SCLPISDLIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAACTAGT GAGTAAGGGT TAAGTTACAG CAAATGTACC TTTGTTTGTT TAAGTTCTAA 60
AACAAATGGA TGTAACACCA TCACCCTCTA AACGTAAACA ATGTTCGTCC TCTCTATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR000212--DNA_helicase_UvrD/REP
IPR001810--F-box_dom
IPR027417--P-loop_NTPase

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005524--F:ATP binding
GO:0004003--F:ATP-dependent DNA helicase activity
GO:0003677--F:DNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000960	Aegilops tauschii	44.19	4.00e-05	42.00
IUUC-Aml-001396	Ailuropoda melanoleuca	27.46	1.00e-29	124.00
IUUC-Apl-003317	Anas platyrhynchos	28.53	2.00e-35	143.00
IUUC-Aca-004498	Anolis carolinensis	27.11	1.00e-36	147.00
IUUC-Aly-005820	Arabidopsis lyrata	42.86	3.90e-02	32.00
IUUC-Bta-013250	Bos taurus	27.20	1.00e-29	124.00
IUUC-Bol-015793	Brassica oleracea	40.48	1.60e-02	33.50
IUUC-Cja-019638	Callithrix jacchus	28.94	2.00e-35	143.00
IUUC-Cfa-020195	Canis familiaris	27.14	3.00e-32	132.00
IUUC-Cpo-022269	Cavia porcellus	25.37	6.00e-24	105.00
IUUC-Cre-022611	Chlamydomonas reinhardtii	36.07	1.60e+00	27.30
IUUC-Csa-024060	Chlorocebus sabaeus	27.46	6.00e-30	124.00
IUUC-Cho-025003	Choloepus hoffmanni	34.17	3.00e-13	69.70
IUUC-Dre-028083	Danio rerio	27.75	1.00e-39	157.00
IUUC-Dno-029203	Dasypus novemcinctus	26.84	5.00e-29	122.00
IUUC-Dor-030477	Dipodomys ordii	24.83	1.00e-20	94.40
IUUC-Dme-031647	Drosophila melanogaster	45.00	3.00e-05	42.40
IUUC-Ete-032861	Echinops telfairi	26.76	4.00e-29	122.00
IUUC-Eca-033205	Equus caballus	26.78	3.00e-32	132.00
IUUC-Eeu-034784	Erinaceus europaeus	30.00	8.00e-15	74.70
IUUC-Fca-035797	Felis catus	27.03	1.00e-28	120.00
IUUC-Gmo-038855	Gadus morhua	27.44	4.00e-26	112.00
IUUC-Gga-040326	Gallus gallus	28.74	2.00e-36	146.00
IUUC-Gac-042240	Gasterosteus aculeatus	26.75	1.00e-31	130.00
IUUC-Ggo-045050	Gorilla gorilla	29.23	1.00e-32	134.00
IUUC-Hsa-046650	Homo sapiens	29.23	2.00e-32	133.00
IUUC-Lch-050231	Latimeria chalumnae	22.50	1.00e-16	80.50
IUUC-Lpe-051265	Leersia perrieri	31.37	6.00e-03	35.00
IUUC-Loc-051884	Lepisosteus oculatus	29.76	8.00e-35	141.00
IUUC-Lma-052982	Leptosphaeria maculans	33.33	3.00e-03	36.20
IUUC-Laf-053843	Loxodonta africana	27.83	3.00e-32	132.00
IUUC-Mcc-055570	Macaca mulatta	28.08	3.00e-34	139.00
IUUC-Meu-056798	Macropus eugenii	30.00	3.00e-08	53.10
IUUC-Mga-059648	Meleagris gallopavo	28.83	1.00e-36	147.00
IUUC-Mmr-060757	Microcebus murinus	26.96	3.00e-29	122.00
IUUC-Mdo-061913	Monodelphis domestica	29.25	8.00e-34	137.00
IUUC-Mmu-064337	Mus musculus	28.00	4.00e-32	132.00
IUUC-Mac-064570	Musa acuminata	44.00	1.00e-03	36.60
IUUC-Mpu-066483	Mustela putorius furo	26.93	2.00e-32	133.00
IUUC-Mlu-068204	Myotis lucifugus	26.36	5.00e-33	135.00
IUUC-Nle-070053	Nomascus leucogenys	27.06	1.00e-30	127.00
IUUC-Opr-070588	Ochotona princeps	29.05	4.00e-33	135.00
IUUC-Ont-072655	Oreochromis niloticus	27.49	2.00e-36	145.00
IUUC-Oan-073351	Ornithorhynchus anatinus	29.48	4.00e-38	152.00
IUUC-Ocu-074465	Oryctolagus cuniculus	27.13	3.00e-27	115.00
IUUC-Oba-075562	Oryza barthii	42.11	7.00e-03	35.40
IUUC-Ogu-078184	Oryza glumaepatula	34.00	4.00e-03	36.60
IUUC-Oin-079365	Oryza indica	32.00	3.20e-02	31.60
IUUC-Olo-080505	Oryza longistaminata	34.15	2.20e-02	35.00
IUUC-Ome-081950	Oryza meridionalis	36.00	2.00e-02	35.00
IUUC-Oni-082338	Oryza nivara	34.78	7.00e-03	35.80
IUUC-Opu-083348	Oryza punctata	27.94	4.40e-02	33.10
IUUC-Oru-085216	Oryza rufipogon	30.99	5.00e-04	39.70
IUUC-Osa-085649	Oryza sativa	32.00	3.50e-02	31.20
IUUC-Olu-087831	Ostreococcus lucimarinus	41.25	2.00e-11	64.30
IUUC-Oga-089088	Otolemur garnettii	25.91	8.00e-30	124.00
IUUC-Oar-089870	Ovis aries	27.14	3.00e-28	119.00
IUUC-Ptr-090957	Pan troglodytes	29.23	1.00e-32	134.00
IUUC-Pan-092632	Papio anubis	27.09	5.00e-30	125.00
IUUC-Psi-093035	Pelodiscus sinensis	29.38	3.00e-38	152.00
IUUC-Ppa-095869	Physcomitrella patens	38.89	6.00e-04	36.60
IUUC-Pfo-096902	Poecilia formosa	30.00	6.00e-36	145.00
IUUC-Pab-098206	Pongo abelii	26.15	3.00e-30	125.00
IUUC-Pop-099175	Populus trichocarpa	36.07	9.00e-05	39.70
IUUC-Pca-100238	Procavia capensis	25.75	5.00e-20	92.00
IUUC-Ppe-101645	Prunus persica	29.06	1.00e-03	36.60
IUUC-Pva-103182	Pteropus vampyrus	26.57	1.00e-28	120.00
IUUC-Rno-105141	Rattus norvegicus	27.71	4.00e-32	132.00
IUUC-Sce-106341	Saccharomyces cerevisiae	30.30	1.00e-04	40.40
IUUC-Sha-106827	Sarcophilus harrisii	28.36	1.00e-36	147.00
IUUC-Sja-107882	Schizosaccharomyces japonicus	38.54	5.00e-14	72.00
IUUC-Spo-108147	Schizosaccharomyces pombe	29.66	2.00e-11	63.20
IUUC-Ssl-108584	Sclerotinia sclerotiorum	26.92	2.90e-01	29.60
IUUC-Sly-111384	Solanum lycopersicum	47.62	6.00e-04	37.40
IUUC-Stu-112851	Solanum tuberosum	38.98	2.50e-02	32.00
IUUC-Sre-115025	Sporisorium reilianum	47.37	6.00e-16	79.00
IUUC-Ssc-116188	Sus scrofa	28.84	9.00e-17	80.50
IUUC-Tgu-116612	Taeniopygia guttata	27.36	6.00e-25	107.00
IUUC-Tni-120734	Tetraodon nigroviridis	27.13	1.00e-31	130.00
IUUC-Tca-121157	Theobroma cacao	38.98	3.00e-05	41.20
IUUC-Tre-122089	Trichoderma reesei	31.82	2.00e-03	36.60
IUUC-Tur-126494	Triticum urartu	41.54	4.00e-06	44.70
IUUC-Tbe-127431	Tupaia belangeri	26.59	3.00e-29	122.00
IUUC-Ttr-128744	Tursiops truncatus	26.90	3.00e-23	102.00
IUUC-Uma-129536	Ustilago maydis	44.58	7.00e-16	78.60
IUUC-Xtr-132902	Xenopus tropicalis	29.08	3.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence