iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111551

Ensembl Protein ID

Solyc07g047970.2.1

UniProt Accession

K4CF01; K4CF01_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g047970.2	Solyc07g047970.2.1	Solyc07g047970.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-08	34.2	189	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           ++ v +l+f +d ++l+s  + g +++WD+++ 
   Q: 189  AS-VKDLDFsPDgKFLAS-VGSGPCRIWDVSKS 219
           45.999****99666666.3459******9765 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAEFANSKNY GVPIYGAGWV PPSALRSAVE PSVDDEKDDG DKSSSSAPGN YVVLAGGGGE 60
GNSGIRNALI VAQFDFDSNV LSDEPVARLG TGGDLPYRMA VHPGGEGLIC SLPKSCRWFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGTAATAT TACAGACATA CAGTACACAT TCTCACCATT TGACTGAAGC AAACAAAAGC 60
CTCTGGTGCG CATCTCAATT TCTCGATACG CTGAGATCAC AGTTACCGAA GATGGCTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

sly:101251489

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001671	Ailuropoda melanoleuca	26.25	3.00e-15	75.50
IUUC-Aly-005479	Arabidopsis lyrata	51.24	2.00e-93	335.00
IUUC-Ath-007466	Arabidopsis thaliana	52.21	1.00e-93	335.00
IUUC-Bta-012386	Bos taurus	27.24	1.00e-17	83.20
IUUC-Bdi-014110	Brachypodium distachyon	49.52	3.00e-84	304.00
IUUC-Bra-016660	Brassica rapa	50.97	1.00e-96	345.00
IUUC-Cja-018998	Callithrix jacchus	25.90	1.00e-18	86.70
IUUC-Cfa-020666	Canis familiaris	25.56	7.00e-18	84.30
IUUC-Cpo-022030	Cavia porcellus	24.91	2.00e-18	85.90
IUUC-Csa-023521	Chlorocebus sabaeus	26.45	3.00e-16	79.00
IUUC-Cin-025431	Ciona intestinalis	28.88	2.00e-15	75.90
IUUC-Dre-027832	Danio rerio	26.29	1.00e-16	80.50
IUUC-Dno-028989	Dasypus novemcinctus	24.53	2.00e-17	83.20
IUUC-Dme-031901	Drosophila melanogaster	25.47	2.00e-17	83.20
IUUC-Ete-032290	Echinops telfairi	27.24	5.00e-13	68.20
IUUC-Eca-033917	Equus caballus	26.79	1.00e-17	83.20
IUUC-Fca-036323	Felis catus	25.56	1.00e-17	83.20
IUUC-Gmo-038693	Gadus morhua	24.51	4.00e-16	78.20
IUUC-Gga-040702	Gallus gallus	26.25	9.00e-18	84.00
IUUC-Gac-042635	Gasterosteus aculeatus	25.09	5.00e-14	71.60
IUUC-Gma-043946	Glycine max	55.46	2.00e-103	368.00
IUUC-Ggo-044648	Gorilla gorilla	25.75	8.00e-17	80.90
IUUC-Hsa-046003	Homo sapiens	25.73	7.00e-17	80.90
IUUC-Itr-048613	Ictidomys tridecemlineatus	26.47	9.00e-16	77.00
IUUC-Lch-049473	Latimeria chalumnae	26.88	9.00e-21	94.00
IUUC-Lpe-051586	Leersia perrieri	47.33	5.00e-88	317.00
IUUC-Loc-052177	Lepisosteus oculatus	25.90	6.00e-19	87.80
IUUC-Laf-054366	Loxodonta africana	27.24	1.00e-16	80.10
IUUC-Mcc-055775	Macaca mulatta	26.56	9.00e-18	84.00
IUUC-Mtr-058661	Medicago truncatula	54.79	8.00e-110	389.00
IUUC-Mmr-061126	Microcebus murinus	28.94	3.00e-18	85.50
IUUC-Mdo-062928	Monodelphis domestica	24.23	2.00e-13	69.30
IUUC-Mmu-064083	Mus musculus	26.42	3.00e-17	82.40
IUUC-Mac-064955	Musa acuminata	53.51	1.00e-113	402.00
IUUC-Mpu-066857	Mustela putorius furo	27.17	3.00e-19	88.60
IUUC-Mlu-067891	Myotis lucifugus	26.79	1.00e-16	80.50
IUUC-Nle-070030	Nomascus leucogenys	26.27	1.00e-16	80.10
IUUC-Opr-070864	Ochotona princeps	26.47	3.00e-16	78.60
IUUC-Ont-072204	Oreochromis niloticus	25.83	2.00e-16	79.70
IUUC-Oan-073643	Ornithorhynchus anatinus	27.66	5.00e-14	70.90
IUUC-Ocu-074217	Oryctolagus cuniculus	26.05	7.00e-15	74.30
IUUC-Oba-075587	Oryza barthii	49.83	3.00e-83	301.00
IUUC-Obr-076826	Oryza brachyantha	48.70	2.00e-94	338.00
IUUC-Ogl-077927	Oryza glaberrima	50.00	5.00e-81	293.00
IUUC-Ogu-078241	Oryza glumaepatula	44.15	1.00e-80	292.00
IUUC-Oin-080217	Oryza indica	50.00	8.00e-81	293.00
IUUC-Olo-081060	Oryza longistaminata	49.80	2.00e-67	249.00
IUUC-Ome-082007	Oryza meridionalis	45.33	1.00e-85	309.00
IUUC-Oni-082827	Oryza nivara	50.00	8.00e-81	293.00
IUUC-Opu-083159	Oryza punctata	45.60	3.00e-86	311.00
IUUC-Oru-085039	Oryza rufipogon	50.00	8.00e-81	293.00
IUUC-Osa-086258	Oryza sativa	50.00	8.00e-81	293.00
IUUC-Ola-087223	Oryzias latipes	23.75	2.00e-16	79.70
IUUC-Oga-088417	Otolemur garnettii	28.15	6.00e-17	81.30
IUUC-Oar-090435	Ovis aries	27.24	9.00e-18	84.00
IUUC-Ptr-090869	Pan troglodytes	25.75	5.00e-11	61.60
IUUC-Pan-092527	Papio anubis	26.45	3.00e-16	79.00
IUUC-Pma-094156	Petromyzon marinus	26.97	2.00e-18	85.90
IUUC-Ppa-095614	Physcomitrella patens	39.72	6.00e-63	233.00
IUUC-Pfo-097488	Poecilia formosa	25.10	3.00e-14	72.00
IUUC-Pab-097720	Pongo abelii	26.14	2.00e-17	82.80
IUUC-Pop-099618	Populus trichocarpa	55.32	3.00e-116	410.00
IUUC-Pca-100288	Procavia capensis	24.19	3.00e-13	68.90
IUUC-Ppe-101864	Prunus persica	58.95	6.00e-103	366.00
IUUC-Pva-103192	Pteropus vampyrus	27.55	1.00e-18	86.70
IUUC-Pgr-103489	Puccinia graminis	22.92	5.00e-07	48.10
IUUC-Ptt-103883	Puccinia triticina	22.31	8.00e-09	53.90
IUUC-Rno-106123	Rattus norvegicus	26.83	2.00e-17	82.80
IUUC-Sha-107169	Sarcophilus harrisii	23.35	1.00e-13	70.10
IUUC-Smo-109265	Selaginella moellendorffii	42.72	8.00e-58	216.00
IUUC-Stu-112264	Solanum tuberosum	95.91	0.00e+00	642.00
IUUC-Sar-113218	Sorex araneus	26.74	3.00e-14	71.20
IUUC-Ssc-115282	Sus scrofa	26.54	3.00e-18	85.50
IUUC-Tru-117866	Takifugu rubripes	27.64	7.00e-18	84.30
IUUC-Tca-121083	Theobroma cacao	58.85	6.00e-121	426.00
IUUC-Tae-124218	Triticum aestivum	52.40	1.00e-86	312.00
IUUC-Ttr-128585	Tursiops truncatus	27.73	2.00e-17	82.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence