iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121083

Ensembl Protein ID

EOY00980

UniProt Accession

A0A061E7J2; A0A061E7J2_THECC

Genbank Protein ID

EOY00980.1

Protein Name

Transducin/WD40 repeat-like superfamily protein, putative

Genbank Nucleotide ID

CM001880

Gene Name

TCM_010880

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_010880	EOY00980	EOY00980

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-06	28.5	201	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvs.GsdDgtikvWDlrtgvl 35
           H++ v +l+f  d ++lvs Gs  g +++WD+ + ++
   Q: 201  HSS-VKDLDFsCDgKFLVSlGS--GLCRIWDVESSKV 234
           555.99****977688888788..99*****988765 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MTNSNSSDTS SDLQKYGVPF YGAGWVPYDH IRSKLASQEK NEENEDKEPT QSKDDEISTS 60
QNYVVFSGGG GEGRSGIPNA IVVSHVDFAS NSLSEQPVFK LGTDSDLPYR MTVHPRGDGI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACATACGC AAGGCATAAG CGTGACTCGC TGCCTGTTTC AGCTCAGTCA CCAGACCAGA 60
AGCACAAATT TCAGAATCAT GACAAATAGC AACAGCTCAG ACACCTCCTC CGATCTCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001671	Ailuropoda melanoleuca	26.38	1.00e-14	73.20
IUUC-Aly-005479	Arabidopsis lyrata	54.01	3.00e-102	364.00
IUUC-Ath-007466	Arabidopsis thaliana	54.78	3.00e-102	364.00
IUUC-Bta-012386	Bos taurus	27.59	1.00e-17	83.60
IUUC-Bdi-014110	Brachypodium distachyon	49.67	3.00e-87	314.00
IUUC-Bra-016660	Brassica rapa	53.19	1.00e-101	362.00
IUUC-Cel-018480	Caenorhabditis elegans	24.74	7.00e-10	57.80
IUUC-Cja-018998	Callithrix jacchus	24.92	1.00e-17	83.20
IUUC-Cfa-020666	Canis familiaris	27.47	9.00e-17	80.50
IUUC-Cpo-022030	Cavia porcellus	25.48	3.00e-17	82.00
IUUC-Cre-022792	Chlamydomonas reinhardtii	26.04	4.00e-11	62.00
IUUC-Csa-023521	Chlorocebus sabaeus	29.13	2.00e-16	79.70
IUUC-Cin-025431	Ciona intestinalis	25.98	7.00e-14	70.90
IUUC-Dre-027832	Danio rerio	23.72	5.00e-17	81.30
IUUC-Dno-028989	Dasypus novemcinctus	27.27	1.00e-16	80.50
IUUC-Dme-031901	Drosophila melanogaster	25.39	9.00e-17	80.50
IUUC-Ete-032290	Echinops telfairi	27.17	3.00e-14	72.40
IUUC-Eca-033917	Equus caballus	27.41	1.00e-17	83.20
IUUC-Fca-036323	Felis catus	26.67	5.00e-17	81.30
IUUC-Fal-037073	Ficedula albicollis	27.59	4.00e-08	53.10
IUUC-Gmo-038693	Gadus morhua	24.71	1.00e-15	77.00
IUUC-Gga-040702	Gallus gallus	27.49	8.00e-16	77.40
IUUC-Gac-042635	Gasterosteus aculeatus	25.62	7.00e-13	67.40
IUUC-Gma-043946	Glycine max	57.97	4.00e-111	394.00
IUUC-Ggo-044648	Gorilla gorilla	27.51	1.00e-16	80.50
IUUC-Hsa-046003	Homo sapiens	27.51	9.00e-17	80.50
IUUC-Itr-048613	Ictidomys tridecemlineatus	28.21	1.00e-15	76.60
IUUC-Lch-049473	Latimeria chalumnae	25.18	3.00e-19	88.60
IUUC-Lpe-051586	Leersia perrieri	47.96	4.00e-92	330.00
IUUC-Loc-052177	Lepisosteus oculatus	23.49	5.00e-17	81.30
IUUC-Laf-054366	Loxodonta africana	27.68	2.00e-16	79.30
IUUC-Mcc-055775	Macaca mulatta	28.38	2.00e-17	82.80
IUUC-Mtr-058661	Medicago truncatula	57.81	1.00e-116	412.00
IUUC-Mla-058865	Melampsora laricipopulina	26.64	3.00e-09	55.80
IUUC-Mvi-060443	Microbotryum violaceum	20.40	3.00e-15	75.90
IUUC-Mmr-061126	Microcebus murinus	28.70	4.00e-18	84.70
IUUC-Mdo-062928	Monodelphis domestica	24.70	1.00e-12	67.00
IUUC-Mmu-064083	Mus musculus	28.09	2.00e-18	86.30
IUUC-Mac-064955	Musa acuminata	51.82	1.00e-109	388.00
IUUC-Mpu-066857	Mustela putorius furo	26.07	4.00e-17	81.60
IUUC-Mlu-067891	Myotis lucifugus	27.59	2.00e-16	79.70
IUUC-Nle-070030	Nomascus leucogenys	27.63	1.00e-16	80.10
IUUC-Opr-070864	Ochotona princeps	29.06	8.00e-17	80.90
IUUC-Ont-072204	Oreochromis niloticus	28.00	4.00e-16	78.20
IUUC-Oan-073643	Ornithorhynchus anatinus	29.19	2.00e-15	75.50
IUUC-Ocu-074217	Oryctolagus cuniculus	27.17	5.00e-16	78.20
IUUC-Oba-075587	Oryza barthii	51.90	1.00e-89	322.00
IUUC-Obr-076826	Oryza brachyantha	45.67	9.00e-96	342.00
IUUC-Ogl-077927	Oryza glaberrima	47.99	1.00e-84	305.00
IUUC-Ogu-078241	Oryza glumaepatula	45.80	6.00e-85	306.00
IUUC-Oin-080217	Oryza indica	50.71	4.00e-84	304.00
IUUC-Olo-081060	Oryza longistaminata	50.40	9.00e-70	256.00
IUUC-Ome-082007	Oryza meridionalis	47.28	1.00e-90	325.00
IUUC-Oni-082827	Oryza nivara	50.71	4.00e-84	304.00
IUUC-Opu-083159	Oryza punctata	46.23	3.00e-92	331.00
IUUC-Oru-085039	Oryza rufipogon	50.71	4.00e-84	304.00
IUUC-Osa-086258	Oryza sativa	50.71	4.00e-84	304.00
IUUC-Ola-087223	Oryzias latipes	27.10	2.00e-15	76.30
IUUC-Oga-088417	Otolemur garnettii	27.04	8.00e-17	80.90
IUUC-Oar-090435	Ovis aries	27.59	8.00e-18	84.00
IUUC-Ptr-090869	Pan troglodytes	25.82	2.00e-11	62.80
IUUC-Pan-092527	Papio anubis	29.13	2.00e-16	79.70
IUUC-Pma-094156	Petromyzon marinus	28.02	3.00e-18	85.10
IUUC-Ppa-095329	Physcomitrella patens	39.45	5.00e-57	214.00
IUUC-Pfo-097488	Poecilia formosa	25.10	8.00e-15	73.90
IUUC-Pab-097720	Pongo abelii	27.95	4.00e-17	82.00
IUUC-Pop-099618	Populus trichocarpa	62.50	9.00e-130	455.00
IUUC-Pca-100288	Procavia capensis	28.27	3.00e-13	68.60
IUUC-Ppe-101864	Prunus persica	59.74	2.00e-104	371.00
IUUC-Pva-103192	Pteropus vampyrus	28.33	6.00e-18	84.30
IUUC-Pgr-103489	Puccinia graminis	21.60	7.00e-07	47.40
IUUC-Ptt-103883	Puccinia triticina	30.68	3.00e-09	55.50
IUUC-Rno-106123	Rattus norvegicus	27.63	7.00e-18	84.30
IUUC-Sha-107169	Sarcophilus harrisii	24.29	3.00e-12	65.50
IUUC-Smo-109265	Selaginella moellendorffii	40.00	2.00e-54	205.00
IUUC-Sly-111551	Solanum lycopersicum	59.00	5.00e-105	373.00
IUUC-Stu-112264	Solanum tuberosum	58.08	2.00e-103	368.00
IUUC-Sar-113218	Sorex araneus	28.06	1.00e-13	68.90
IUUC-Sre-115183	Sporisorium reilianum	31.87	1.00e-08	53.90
IUUC-Ssc-115282	Sus scrofa	28.63	5.00e-18	84.70
IUUC-Tru-117866	Takifugu rubripes	27.59	8.00e-17	80.90
IUUC-Tae-124218	Triticum aestivum	49.16	7.00e-87	313.00
IUUC-Ttr-128585	Tursiops truncatus	28.33	1.00e-16	79.70
IUUC-Uma-129598	Ustilago maydis	22.60	8.00e-15	74.30
IUUC-Vvi-131024	Vitis vinifera	61.04	2.00e-124	437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence