iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/MIU	95.06	0.00e+00	847.00	IUUC-Hsa-136747
DUB/MINDY	95.06	0.00e+00	847.00	IUUC-Hsa-136747

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSEVTKELLE LVWGTKSSPG LSDTIFCRWT QGFVFSDSEG SALEQFEGGP CAVIAPVQAF 60
LLKKLLFSSE KSSWRDCSED EQKELLCHTL CDILESACDS SGSYCMVSWL RGRTTEDAAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTAGTTGC GGCTTCGCCC GGCTTGACAG GCGCTGTCTC TGCGGGCACC GAGCTACACT 60
CATCCCGCTC GGCCTCCCAA TCGCGCCTCG GCCGCCGCCG TCCCGCTGCC CTTTTCTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR025257--DUF4205
IPR011992--EF-hand-dom_pair

Pfam

PF13898--DUF4205

SMART

SM01174--DUF4205

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005654--C:nucleoplasm
GO:0016807--F:cysteine-type carboxypeptidase activity
GO:1990380--F:Lys48-specific deubiquitinase activity

KEGG

rno:291320

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-136377	Aegilops tauschii	30.35	3.00e-45	176.00
IUUC-Aml-136379	Ailuropoda melanoleuca	94.17	0.00e+00	837.00
IUUC-Atr-136383	Amborella trichopoda	30.89	7.00e-41	161.00
IUUC-Apl-136385	Anas platyrhynchos	84.43	0.00e+00	643.00
IUUC-Aca-136389	Anolis carolinensis	82.06	0.00e+00	759.00
IUUC-Aly-136394	Arabidopsis lyrata	29.79	5.00e-47	182.00
IUUC-Ath-136396	Arabidopsis thaliana	31.00	1.00e-47	184.00
IUUC-Ame-136407	Astyanax mexicanus	73.17	0.00e+00	697.00
IUUC-Bta-136411	Bos taurus	93.71	0.00e+00	841.00
IUUC-Bdi-136416	Brachypodium distachyon	30.21	9.00e-47	181.00
IUUC-Bol-136419	Brassica oleracea	30.13	1.00e-45	177.00
IUUC-Bra-136421	Brassica rapa	31.12	5.00e-46	179.00
IUUC-Cja-136424	Callithrix jacchus	94.38	0.00e+00	841.00
IUUC-Cfa-136428	Canis familiaris	91.06	0.00e+00	753.00
IUUC-Cpo-136432	Cavia porcellus	94.16	0.00e+00	838.00
IUUC-Csa-136438	Chlorocebus sabaeus	95.06	0.00e+00	847.00
IUUC-Cho-136444	Choloepus hoffmanni	89.61	6.00e-163	566.00
IUUC-Cin-136447	Ciona intestinalis	41.98	1.00e-94	340.00
IUUC-Csv-136448	Ciona savignyi	41.53	1.00e-93	336.00
IUUC-Dre-136452	Danio rerio	73.09	0.00e+00	654.00
IUUC-Dno-136456	Dasypus novemcinctus	92.81	0.00e+00	829.00
IUUC-Dor-136461	Dipodomys ordii	90.11	0.00e+00	649.00
IUUC-Dme-136466	Drosophila melanogaster	43.19	9.00e-110	390.00
IUUC-Ete-136467	Echinops telfairi	72.07	0.00e+00	639.00
IUUC-Eca-136471	Equus caballus	94.61	0.00e+00	845.00
IUUC-Eeu-136476	Erinaceus europaeus	87.19	0.00e+00	742.00
IUUC-Fca-136477	Felis catus	93.50	0.00e+00	834.00
IUUC-Fal-136481	Ficedula albicollis	84.38	0.00e+00	753.00
IUUC-Gmo-136486	Gadus morhua	68.16	5.00e-178	617.00
IUUC-Gga-136491	Gallus gallus	84.53	0.00e+00	784.00
IUUC-Gac-136495	Gasterosteus aculeatus	68.39	0.00e+00	628.00
IUUC-Gma-136499	Glycine max	29.29	7.00e-44	172.00
IUUC-Ggo-136502	Gorilla gorilla	87.02	0.00e+00	754.00
IUUC-Hsa-136747	Homo sapiens	95.06	0.00e+00	847.00
IUUC-Hvu-136508	Hordeum vulgare	34.80	6.00e-39	154.00
IUUC-Itr-136510	Ictidomys tridecemlineatus	93.40	4.00e-106	376.00
IUUC-Lch-136515	Latimeria chalumnae	76.39	0.00e+00	702.00
IUUC-Lpe-136518	Leersia perrieri	28.71	4.00e-41	162.00
IUUC-Loc-136521	Lepisosteus oculatus	75.95	0.00e+00	708.00
IUUC-Laf-136527	Loxodonta africana	93.03	0.00e+00	828.00
IUUC-Mcc-136530	Macaca mulatta	95.06	0.00e+00	847.00
IUUC-Meu-136534	Macropus eugenii	58.42	4.00e-89	322.00
IUUC-Mga-136543	Meleagris gallopavo	84.01	0.00e+00	728.00
IUUC-Mmr-136547	Microcebus murinus	94.61	0.00e+00	846.00
IUUC-Mdo-136551	Monodelphis domestica	87.87	0.00e+00	827.00
IUUC-Mmu-136555	Mus musculus	97.52	0.00e+00	867.00
IUUC-Mpu-136561	Mustela putorius furo	92.69	2.00e-180	624.00
IUUC-Mlu-136565	Myotis lucifugus	93.26	0.00e+00	833.00
IUUC-Nle-136572	Nomascus leucogenys	95.06	0.00e+00	847.00
IUUC-Opr-136576	Ochotona princeps	65.40	2.00e-133	468.00
IUUC-Ont-136579	Oreochromis niloticus	67.34	1.00e-179	622.00
IUUC-Oan-136582	Ornithorhynchus anatinus	85.39	0.00e+00	741.00
IUUC-Ocu-136585	Oryctolagus cuniculus	94.61	0.00e+00	842.00
IUUC-Oba-136589	Oryza barthii	28.54	5.00e-48	185.00
IUUC-Obr-136592	Oryza brachyantha	28.02	3.00e-47	182.00
IUUC-Ogl-136593	Oryza glaberrima	28.54	6.00e-48	185.00
IUUC-Ogu-136595	Oryza glumaepatula	28.54	8.00e-48	185.00
IUUC-Oin-136597	Oryza indica	28.39	9.00e-46	177.00
IUUC-Olo-136599	Oryza longistaminata	27.61	6.00e-48	185.00
IUUC-Oni-136602	Oryza nivara	28.54	6.00e-48	185.00
IUUC-Opu-136604	Oryza punctata	28.60	1.00e-47	184.00
IUUC-Oru-136606	Oryza rufipogon	28.54	6.00e-48	185.00
IUUC-Osa-136608	Oryza sativa	30.87	8.00e-33	134.00
IUUC-Ola-136610	Oryzias latipes	68.61	0.00e+00	647.00
IUUC-Oga-136614	Otolemur garnettii	93.96	0.00e+00	836.00
IUUC-Oar-136619	Ovis aries	93.48	0.00e+00	838.00
IUUC-Ptr-136623	Pan troglodytes	94.83	0.00e+00	845.00
IUUC-Pan-136627	Papio anubis	95.06	0.00e+00	847.00
IUUC-Psi-136631	Pelodiscus sinensis	85.39	2.00e-180	624.00
IUUC-Pma-136635	Petromyzon marinus	70.42	3.00e-47	181.00
IUUC-Pfo-136641	Poecilia formosa	65.79	0.00e+00	633.00
IUUC-Pab-136645	Pongo abelii	94.83	0.00e+00	844.00
IUUC-Pop-136650	Populus trichocarpa	31.26	1.00e-39	157.00
IUUC-Pca-136652	Procavia capensis	72.36	0.00e+00	629.00
IUUC-Ppe-136656	Prunus persica	28.78	2.00e-45	176.00
IUUC-Pva-136658	Pteropus vampyrus	85.17	0.00e+00	726.00
IUUC-Sha-136671	Sarcophilus harrisii	88.31	0.00e+00	830.00
IUUC-Smo-136678	Selaginella moellendorffii	31.16	2.00e-44	173.00
IUUC-Sit-136680	Setaria italica	28.82	4.00e-36	145.00
IUUC-Sly-136683	Solanum lycopersicum	29.56	8.00e-44	171.00
IUUC-Sar-136685	Sorex araneus	84.68	0.00e+00	631.00
IUUC-Sbi-136688	Sorghum bicolor	31.26	8.00e-46	178.00
IUUC-Ssc-136691	Sus scrofa	94.38	0.00e+00	844.00
IUUC-Tgu-136694	Taeniopygia guttata	86.47	0.00e+00	745.00
IUUC-Tru-136698	Takifugu rubripes	67.32	0.00e+00	642.00
IUUC-Tsy-136703	Tarsius syrichta	89.89	0.00e+00	775.00
IUUC-Tni-136706	Tetraodon nigroviridis	70.02	0.00e+00	656.00
IUUC-Tca-136711	Theobroma cacao	29.36	3.00e-44	173.00
IUUC-Tae-136714	Triticum aestivum	30.14	1.00e-47	184.00
IUUC-Tur-136716	Triticum urartu	26.24	3.00e-29	123.00
IUUC-Tbe-136719	Tupaia belangeri	93.22	0.00e+00	765.00
IUUC-Ttr-136722	Tursiops truncatus	90.34	0.00e+00	803.00
IUUC-Vda-136727	Verticillium dahliae	24.36	5.00e-02	32.00
IUUC-Vpa-136729	Vicugna pacos	93.46	0.00e+00	773.00
IUUC-Vvi-136732	Vitis vinifera	28.84	1.00e-45	177.00
IUUC-Xtr-136734	Xenopus tropicalis	70.43	1.00e-177	615.00
IUUC-Xma-136738	Xiphophorus maculatus	67.79	0.00e+00	640.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence