iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005403

UUCD1 version

UUC-ArL-01205

Ensembl Protein ID

fgenesh1_pm.C_scaffold_7002288

UniProt Accession

D7MH09; D7MH09_ARALL

Genbank Protein ID

EFH44537.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348719

Gene Name

ATCFM3B; ARALYDRAFT_330061

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_7002288	fgenesh1_pm.C_scaffold_7002288	fgenesh1_pm.C_scaffold_7002288

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	31.82	2.70e+00	32.30	IUUC-Hsa-046924
UBD/Other/Other	31.82	2.70e+00	32.30	IUUC-Hsa-046924

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAINSSRHFC PTTTSAKFSD SLGSSFCKLH GKSSSISLRS YIFGFSFIKK VKRLSCEGSG 60
SSSRNENWNR NQRQNQFRPS KVVLNRRKEE RFSDLGVMSG ENSSRSSDVG GGGSTMEKIV 120

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Nucleotide Sequence
(Fasta)

ATGGCGATTA ATTCAAGTCG CCATTTTTGC CCGACGACTA CTTCGGCGAA GTTTTCCGAT 60
TCGTTGGGAA GCTCTTTCTG CAAGTTACAT GGAAAAAGTT CGTCAATTTC ACTCAGGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033262--CFM3
IPR001890--RNA-binding_CRM

PROSITE

PS51295--CRM

Pfam

PF01985--CRS1_YhbY

SMART

SM01103--CRS1_YhbY

Gene Ontology

GO:0009507--C:chloroplast
GO:0003723--F:RNA binding
GO:0000373--P:Group II intron splicing
GO:0048316--P:seed development

KEGG

aly:ARALYDRAFT_330061

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000452	Aegilops tauschii	33.33	9.40e-01	26.90
IUUC-Acl-008085	Aspergillus clavatus	28.85	3.50e+00	25.40
IUUC-Ame-011464	Astyanax mexicanus	40.62	1.50e-01	30.00
IUUC-Bol-016598	Brassica oleracea	74.15	0.00e+00	1145.00
IUUC-Bra-016919	Brassica rapa	70.49	0.00e+00	1150.00
IUUC-Csa-023367	Chlorocebus sabaeus	31.58	2.70e+00	26.60
IUUC-Eca-033237	Equus caballus	31.58	8.50e-01	28.10
IUUC-Ggo-044933	Gorilla gorilla	31.82	5.30e-02	32.30
IUUC-Hsa-046924	Homo sapiens	31.82	4.80e-02	32.30
IUUC-Ptr-091275	Pan troglodytes	31.82	5.00e-02	32.30
IUUC-Pno-094976	Phaeosphaeria nodorum	34.88	3.30e-01	28.50
IUUC-Smo-109291	Selaginella moellendorffii	39.77	2.00e-114	405.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence