iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
miRNAMap	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLM	dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.20e-09	36.6	6	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C+ +++ ++ ++eC+ C++wfH  C++ + ee+  + + + Cp+C+
   Q: 6    VYC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVE-EEKAADIDLYHCPNCE 54
           69*.******************************.*******99******6 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MASVPVYCLC RLPYDVTRFM IECDMCQDWF HGSCVGVEEE KAADIDLYHC PNCEVLHGPS 60
IMKKRRGSSK GHDNHKGKPL KTGSSMFIRE LRGRTFDSSD EVILKPTGSQ LTVEFLEENS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGAGCTGT GTTGCCCCGG AGCGAGCCTA GCCGCTGGCG AGTCTCTGGG GCTGAGCTCT 60
GCGCCCTGAG GAGTTCCCCC TGCAGCCTCG GGCATGAAGA GATCTTTGTA GCGTTTGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

rno:317425

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002427	Ailuropoda melanoleuca	93.75	0.00e+00	1471.00
IUUC-Aca-004346	Anolis carolinensis	68.72	0.00e+00	1123.00
IUUC-Aly-005443	Arabidopsis lyrata	35.82	6.00e-11	60.80
IUUC-Acl-008303	Aspergillus clavatus	32.14	2.00e-67	251.00
IUUC-Afl-008579	Aspergillus flavus	27.90	7.00e-29	122.00
IUUC-Afu-008903	Aspergillus fumigatus	33.79	2.00e-67	251.00
IUUC-Ani-009279	Aspergillus nidulans	31.80	1.00e-65	245.00
IUUC-Ang-009645	Aspergillus niger	30.88	2.00e-64	241.00
IUUC-Aor-010233	Aspergillus oryzae	31.34	8.00e-67	249.00
IUUC-Ate-010345	Aspergillus terreus	32.59	2.00e-69	257.00
IUUC-Ame-010945	Astyanax mexicanus	61.00	0.00e+00	1052.00
IUUC-Cja-018757	Callithrix jacchus	64.32	1.00e-162	566.00
IUUC-Cfa-021156	Canis familiaris	93.37	0.00e+00	1667.00
IUUC-Cpo-022284	Cavia porcellus	93.65	0.00e+00	1686.00
IUUC-Cre-022934	Chlamydomonas reinhardtii	41.54	3.00e-10	58.50
IUUC-Csa-023515	Chlorocebus sabaeus	94.73	0.00e+00	1748.00
IUUC-Cme-027118	Cyanidioschyzon merolae	31.20	7.00e-52	198.00
IUUC-Dre-028423	Danio rerio	63.39	0.00e+00	1051.00
IUUC-Dno-029446	Dasypus novemcinctus	92.63	0.00e+00	1173.00
IUUC-Dse-031402	Dothistroma septosporum	34.88	2.00e-64	241.00
IUUC-Ete-032380	Echinops telfairi	93.75	0.00e+00	1095.00
IUUC-Eca-034302	Equus caballus	94.04	0.00e+00	1672.00
IUUC-Fca-035578	Felis catus	94.04	0.00e+00	1694.00
IUUC-Fal-037017	Ficedula albicollis	61.72	0.00e+00	657.00
IUUC-Gmo-038789	Gadus morhua	61.00	0.00e+00	1085.00
IUUC-Gga-040290	Gallus gallus	61.94	0.00e+00	662.00
IUUC-Gac-041666	Gasterosteus aculeatus	79.65	0.00e+00	811.00
IUUC-Gma-042998	Glycine max	42.00	1.00e-10	59.70
IUUC-Ggo-044712	Gorilla gorilla	94.35	0.00e+00	1743.00
IUUC-Hsa-045724	Homo sapiens	94.82	0.00e+00	1753.00
IUUC-Hvu-047723	Hordeum vulgare	34.55	3.00e-09	55.10
IUUC-Kpa-049384	Komagataella pastoris	32.70	7.00e-57	214.00
IUUC-Lch-049793	Latimeria chalumnae	64.99	0.00e+00	1172.00
IUUC-Loc-051927	Lepisosteus oculatus	65.85	0.00e+00	664.00
IUUC-Lma-053190	Leptosphaeria maculans	34.90	8.00e-67	249.00
IUUC-Laf-053656	Loxodonta africana	93.99	0.00e+00	1550.00
IUUC-Mcc-055658	Macaca mulatta	94.73	0.00e+00	1748.00
IUUC-Mtr-057679	Medicago truncatula	41.54	1.00e-11	62.80
IUUC-Mla-058890	Melampsora laricipopulina	48.56	7.00e-75	273.00
IUUC-Mvi-060481	Microbotryum violaceum	38.93	5.00e-78	286.00
IUUC-Mmr-060993	Microcebus murinus	94.72	0.00e+00	1658.00
IUUC-Mdo-062097	Monodelphis domestica	69.25	0.00e+00	1206.00
IUUC-Mmu-063909	Mus musculus	98.24	0.00e+00	1771.00
IUUC-Mpu-066429	Mustela putorius furo	94.04	0.00e+00	1696.00
IUUC-Mlu-067746	Myotis lucifugus	91.72	0.00e+00	1657.00
IUUC-Nfi-068537	Neosartorya fischeri	32.59	4.00e-68	253.00
IUUC-Nle-070143	Nomascus leucogenys	94.24	0.00e+00	1766.00
IUUC-Ont-072257	Oreochromis niloticus	80.69	0.00e+00	818.00
IUUC-Oan-073654	Ornithorhynchus anatinus	84.27	0.00e+00	857.00
IUUC-Ocu-074417	Oryctolagus cuniculus	93.16	0.00e+00	1671.00
IUUC-Ola-087502	Oryzias latipes	61.89	0.00e+00	1015.00
IUUC-Oga-088662	Otolemur garnettii	94.83	0.00e+00	1392.00
IUUC-Oar-090332	Ovis aries	93.67	0.00e+00	1669.00
IUUC-Ptr-091646	Pan troglodytes	94.47	0.00e+00	1425.00
IUUC-Pan-092122	Papio anubis	94.63	0.00e+00	1747.00
IUUC-Pma-094621	Petromyzon marinus	67.63	0.00e+00	645.00
IUUC-Pno-094984	Phaeosphaeria nodorum	35.48	2.00e-65	245.00
IUUC-Pfo-096107	Poecilia formosa	80.48	0.00e+00	816.00
IUUC-Pab-097635	Pongo abelii	85.07	0.00e+00	1492.00
IUUC-Pop-099324	Populus trichocarpa	42.00	3.00e-11	61.60
IUUC-Pca-100779	Procavia capensis	89.40	0.00e+00	927.00
IUUC-Pva-102839	Pteropus vampyrus	80.92	0.00e+00	1354.00
IUUC-Ptt-103859	Puccinia triticina	39.71	3.00e-77	283.00
IUUC-Pte-104241	Pyrenophora teres	33.91	3.00e-64	241.00
IUUC-Pyt-104741	Pyrenophora triticirepentis	33.91	2.00e-63	237.00
IUUC-Sja-107763	Schizosaccharomyces japonicus	34.88	3.00e-47	183.00
IUUC-Sly-110932	Solanum lycopersicum	42.00	1.00e-10	60.10
IUUC-Stu-112357	Solanum tuberosum	42.00	1.00e-10	59.70
IUUC-Ssc-115645	Sus scrofa	94.43	0.00e+00	1626.00
IUUC-Tgu-117091	Taeniopygia guttata	61.94	0.00e+00	660.00
IUUC-Tru-118403	Takifugu rubripes	76.92	0.00e+00	797.00
IUUC-Tsy-119214	Tarsius syrichta	87.43	0.00e+00	1228.00
IUUC-Tni-119736	Tetraodon nigroviridis	80.04	0.00e+00	801.00
IUUC-Tme-127054	Tuber melanosporum	30.39	2.00e-54	208.00
IUUC-Tbe-128138	Tupaia belangeri	93.30	0.00e+00	1449.00
IUUC-Ttr-128194	Tursiops truncatus	62.39	0.00e+00	637.00
IUUC-Vpa-130595	Vicugna pacos	89.38	0.00e+00	1057.00
IUUC-Xtr-132307	Xenopus tropicalis	67.61	0.00e+00	1150.00
IUUC-Xma-134323	Xiphophorus maculatus	81.34	0.00e+00	822.00
IUUC-Yli-134626	Yarrowia lipolytica	35.73	3.00e-60	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence