iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-131895

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ring finger protein 41, E3 ubiquitin protein ligase

Genbank Nucleotide ID

AAMC01034955

Gene Name

rnf41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000009498.1	ENSXETT00000020954.1	ENSXETP00000020954.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-06	28.5	12	69
E3 activity/RING/RING	3.40e-06	27.6	18	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnl 59
           v e+++CpI   + ++Pv +p + + +  ++I +w++++++ cPv+r+ +t   l P  
   Q: 12   VDEDLICPICSGVLEEPVQAPhCEHAFCNACITQWFSQQQT-CPVDRSVVTVAHLRPVP 69
           56899******************************998887.******99999887764 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC   +++ p+  p C H+f+  C+ +w       s++++CP++r
   Q: 18   CPICSGVLEE-PVQAPhCEHAFCNACITQW------FSQQQTCPVDR 57
           ****999999.777777*************......********987 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MGYDVSRFQG DVDEDLICPI CSGVLEEPVQ APHCEHAFCN ACITQWFSQQ QTCPVDRSVV 60
TVAHLRPVPR IMRNMLSKLQ ITCDNAVFGC TTIVRLDNLM SHLSDCEHNP KRPVTCEQGC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGTATG ATGTAAGTCG TTTCCAGGGT GATGTTGACG AAGATCTTAT TTGCCCCATT 60
TGCAGTGGGG TCTTGGAGGA GCCAGTGCAA GTAAGTAAAA AATGTATATG GTAATCTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR008974--TRAF-like
IPR015036--USP8_interacting
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF08941--USP8_interact

SMART

SM00184--RING

Gene Ontology

GO:0016881--F:acid-amino acid ligase activity
GO:0031386--F:protein tag
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

xtr:100489964

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002398	Ailuropoda melanoleuca	95.27	0.00e+00	636.00
IUUC-Apl-003568	Anas platyrhynchos	95.28	0.00e+00	629.00
IUUC-Aca-005119	Anolis carolinensis	95.58	0.00e+00	639.00
IUUC-Ame-010708	Astyanax mexicanus	90.85	3.00e-178	616.00
IUUC-Bta-013428	Bos taurus	91.80	4.00e-175	606.00
IUUC-Cja-019844	Callithrix jacchus	94.97	0.00e+00	631.00
IUUC-Cfa-021124	Canis familiaris	95.27	0.00e+00	636.00
IUUC-Cpo-022325	Cavia porcellus	94.95	0.00e+00	635.00
IUUC-Csa-023113	Chlorocebus sabaeus	95.27	0.00e+00	636.00
IUUC-Cho-024991	Choloepus hoffmanni	93.30	4.00e-109	386.00
IUUC-Cne-026870	Cryptococcus neoformans	38.52	2.00e-20	94.00
IUUC-Dre-028730	Danio rerio	90.54	9.00e-178	615.00
IUUC-Dno-028908	Dasypus novemcinctus	95.12	9.00e-166	575.00
IUUC-Dor-030411	Dipodomys ordii	95.58	0.00e+00	637.00
IUUC-Dse-031478	Dothistroma septosporum	29.13	1.00e-08	55.10
IUUC-Dme-031868	Drosophila melanogaster	58.10	3.00e-113	400.00
IUUC-Ete-032896	Echinops telfairi	78.87	2.00e-122	431.00
IUUC-Eca-034135	Equus caballus	95.27	0.00e+00	636.00
IUUC-Eeu-034675	Erinaceus europaeus	94.95	0.00e+00	634.00
IUUC-Fca-035612	Felis catus	95.27	0.00e+00	636.00
IUUC-Fal-036922	Ficedula albicollis	90.12	6.00e-39	150.00
IUUC-Gmo-039648	Gadus morhua	88.01	5.00e-172	596.00
IUUC-Gga-040474	Gallus gallus	95.90	0.00e+00	641.00
IUUC-Gac-041951	Gasterosteus aculeatus	88.64	2.00e-174	604.00
IUUC-Ggo-045126	Gorilla gorilla	94.97	0.00e+00	631.00
IUUC-Hsa-046402	Homo sapiens	95.27	0.00e+00	636.00
IUUC-Itr-047895	Ictidomys tridecemlineatus	95.27	0.00e+00	636.00
IUUC-Lch-050266	Latimeria chalumnae	92.43	1.00e-180	625.00
IUUC-Loc-052547	Lepisosteus oculatus	91.48	5.00e-179	619.00
IUUC-Lma-053014	Leptosphaeria maculans	33.87	3.00e-12	66.60
IUUC-Laf-054332	Loxodonta africana	95.28	0.00e+00	632.00
IUUC-Mcc-055869	Macaca mulatta	95.27	0.00e+00	636.00
IUUC-Meu-056735	Macropus eugenii	95.12	1.00e-165	574.00
IUUC-Mga-060100	Meleagris gallopavo	95.90	0.00e+00	641.00
IUUC-Mmr-061382	Microcebus murinus	95.27	0.00e+00	636.00
IUUC-Mmu-064225	Mus musculus	95.27	0.00e+00	635.00
IUUC-Mpu-066709	Mustela putorius furo	95.27	0.00e+00	636.00
IUUC-Mlu-067168	Myotis lucifugus	95.27	0.00e+00	637.00
IUUC-Nle-070176	Nomascus leucogenys	95.27	0.00e+00	636.00
IUUC-Opr-070259	Ochotona princeps	94.95	0.00e+00	635.00
IUUC-Ont-071235	Oreochromis niloticus	90.22	5.00e-177	612.00
IUUC-Oan-072850	Ornithorhynchus anatinus	94.16	1.00e-82	299.00
IUUC-Ocu-074165	Oryctolagus cuniculus	94.95	0.00e+00	635.00
IUUC-Ola-086658	Oryzias latipes	88.96	1.00e-173	601.00
IUUC-Oga-088933	Otolemur garnettii	95.27	0.00e+00	636.00
IUUC-Oar-090089	Ovis aries	95.58	0.00e+00	637.00
IUUC-Ptr-091263	Pan troglodytes	95.27	0.00e+00	636.00
IUUC-Pan-092926	Papio anubis	95.27	0.00e+00	636.00
IUUC-Psi-093934	Pelodiscus sinensis	88.36	5.00e-167	579.00
IUUC-Pma-094578	Petromyzon marinus	68.03	2.00e-125	441.00
IUUC-Pno-094854	Phaeosphaeria nodorum	35.77	2.00e-13	70.10
IUUC-Pfo-097431	Poecilia formosa	90.22	9.00e-177	612.00
IUUC-Pab-097852	Pongo abelii	95.27	0.00e+00	636.00
IUUC-Pca-100496	Procavia capensis	86.79	6.00e-162	563.00
IUUC-Ppe-101708	Prunus persica	29.57	8.00e-07	50.10
IUUC-Pva-103157	Pteropus vampyrus	94.00	1.00e-111	394.00
IUUC-Pgr-103569	Puccinia graminis	37.74	2.00e-13	69.30
IUUC-Pte-104279	Pyrenophora teres	36.70	3.00e-12	67.00
IUUC-Pyt-104429	Pyrenophora triticirepentis	36.70	2.00e-12	67.00
IUUC-Rno-105928	Rattus norvegicus	94.95	0.00e+00	634.00
IUUC-Sha-107556	Sarcophilus harrisii	94.97	0.00e+00	631.00
IUUC-Sar-113208	Sorex araneus	95.27	0.00e+00	636.00
IUUC-Ssc-116011	Sus scrofa	95.58	0.00e+00	637.00
IUUC-Tgu-116882	Taeniopygia guttata	73.00	4.00e-71	259.00
IUUC-Tru-117987	Takifugu rubripes	89.91	4.00e-176	610.00
IUUC-Tsy-118785	Tarsius syrichta	94.95	0.00e+00	629.00
IUUC-Tni-120165	Tetraodon nigroviridis	89.91	3.00e-176	610.00
IUUC-Tbe-127920	Tupaia belangeri	94.50	1.00e-113	401.00
IUUC-Ttr-129160	Tursiops truncatus	95.27	0.00e+00	635.00
IUUC-Vda-129938	Verticillium dahliae	38.46	2.00e-18	87.40
IUUC-Vpa-130629	Vicugna pacos	95.27	0.00e+00	636.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence