iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027150

Ensembl Protein ID

CMT290CT

UniProt Accession

M1VMJ1; M1VMJ1_CYAM1

Genbank Protein ID

BAM83263.1

Protein Name

Similar to TFIIH subunit SSL1

Genbank Nucleotide ID

AP006502

Gene Name

CYME_CMT290C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMT290C	CMT290CT	CMT290CT

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	29.93	2.00e-47	185.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MTQLCVERSG SCRLHLQRPV QQSALSGRPE GVRLECTSAS FIVNAPMHLP FTQLEEPARD 60
ASERLQWDAR AAGLQPREQV APTSRREDEA NYAWERRYER SWEAIGVSDA GGGIFRRDAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGCAGC TGTGCGTCGA GCGTTCCGGG TCATGCCGCT TGCATCTGCA GCGCCCTGTT 60
CAGCAGAGTG CACTCAGCGG CAGGCCTGAG GGCGTTAGAC TCGAATGCAC TTCTGCGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006351--P:transcription, DNA-templated

KEGG

cme:CYME_CMT290C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	30.41	2.00e-37	147.00
IUUC-Aml-002041	Ailuropoda melanoleuca	31.25	2.00e-49	187.00
IUUC-Atr-003056	Amborella trichopoda	35.08	1.00e-59	221.00
IUUC-Apl-003464	Anas platyrhynchos	31.59	8.00e-48	181.00
IUUC-Aca-004745	Anolis carolinensis	32.28	5.00e-48	182.00
IUUC-Aly-005559	Arabidopsis lyrata	32.65	3.00e-55	206.00
IUUC-Ath-007556	Arabidopsis thaliana	32.65	1.00e-55	208.00
IUUC-Ago-007851	Ashbya gossypii	31.49	7.00e-52	195.00
IUUC-Acl-008100	Aspergillus clavatus	32.91	4.00e-54	203.00
IUUC-Afl-008649	Aspergillus flavus	38.03	2.00e-09	51.20
IUUC-Afu-009066	Aspergillus fumigatus	31.98	6.00e-54	202.00
IUUC-Ani-009372	Aspergillus nidulans	33.50	5.00e-52	196.00
IUUC-Ang-009726	Aspergillus niger	33.77	3.00e-58	216.00
IUUC-Aor-010135	Aspergillus oryzae	32.29	2.00e-50	191.00
IUUC-Ate-010399	Aspergillus terreus	38.94	1.00e-12	63.50
IUUC-Ame-011618	Astyanax mexicanus	28.78	5.00e-53	199.00
IUUC-Bgr-012154	Blumeria graminis	31.40	3.00e-51	193.00
IUUC-Bta-012353	Bos taurus	32.54	4.00e-50	189.00
IUUC-Bci-013932	Botrytis cinerea	32.06	2.00e-52	197.00
IUUC-Bdi-014391	Brachypodium distachyon	32.21	8.00e-58	215.00
IUUC-Bol-015128	Brassica oleracea	33.71	1.00e-58	217.00
IUUC-Bra-017932	Brassica rapa	33.26	7.00e-58	215.00
IUUC-Cel-018649	Caenorhabditis elegans	27.75	3.00e-40	156.00
IUUC-Cja-018776	Callithrix jacchus	31.47	2.00e-50	190.00
IUUC-Cfa-020584	Canis familiaris	31.33	1.00e-49	187.00
IUUC-Cpo-021300	Cavia porcellus	32.33	3.00e-50	189.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	32.51	9.00e-51	191.00
IUUC-Csa-024092	Chlorocebus sabaeus	31.12	2.00e-49	187.00
IUUC-Cho-024919	Choloepus hoffmanni	34.80	4.00e-25	105.00
IUUC-Cin-025386	Ciona intestinalis	32.45	5.00e-61	225.00
IUUC-Csv-026295	Ciona savignyi	32.67	4.00e-60	222.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	32.55	3.00e-50	190.00
IUUC-Cne-026956	Cryptococcus neoformans	25.74	1.00e-39	154.00
IUUC-Dre-027962	Danio rerio	30.04	2.00e-55	207.00
IUUC-Dno-029979	Dasypus novemcinctus	34.84	6.00e-44	169.00
IUUC-Dse-031405	Dothistroma septosporum	32.45	1.00e-49	187.00
IUUC-Dme-031710	Drosophila melanogaster	31.61	6.00e-58	215.00
IUUC-Ete-032631	Echinops telfairi	29.89	4.00e-45	172.00
IUUC-Eca-034054	Equus caballus	33.33	2.00e-50	190.00
IUUC-Fca-035724	Felis catus	29.07	9.00e-45	171.00
IUUC-Fal-036987	Ficedula albicollis	29.61	9.00e-54	201.00
IUUC-Fox-037692	Fusarium oxysporum	32.39	1.00e-59	221.00
IUUC-Fso-038442	Fusarium solani	33.19	4.00e-56	209.00
IUUC-Gmo-039273	Gadus morhua	28.76	2.00e-49	187.00
IUUC-Ggr-040009	Gaeumannomyces graminis	31.65	2.00e-46	177.00
IUUC-Gga-041089	Gallus gallus	30.28	4.00e-54	202.00
IUUC-Gac-041978	Gasterosteus aculeatus	28.60	9.00e-48	181.00
IUUC-Gma-043371	Glycine max	37.44	2.00e-64	237.00
IUUC-Hsa-046001	Homo sapiens	30.90	9.00e-49	184.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	31.76	7.00e-57	211.00
IUUC-Kpa-049235	Komagataella pastoris	30.80	1.00e-49	187.00
IUUC-Lch-049926	Latimeria chalumnae	31.03	5.00e-54	202.00
IUUC-Lpe-051352	Leersia perrieri	34.46	2.00e-57	213.00
IUUC-Loc-051987	Lepisosteus oculatus	28.85	2.00e-51	194.00
IUUC-Lma-053171	Leptosphaeria maculans	30.51	2.00e-49	187.00
IUUC-Laf-054372	Loxodonta africana	31.12	1.00e-50	191.00
IUUC-Mcc-055108	Macaca mulatta	31.12	2.00e-49	187.00
IUUC-Mor-056990	Magnaporthe oryzae	32.49	4.00e-50	189.00
IUUC-Mtr-058401	Medicago truncatula	35.33	7.00e-64	235.00
IUUC-Mla-059186	Melampsora laricipopulina	33.33	2.00e-57	214.00
IUUC-Mvi-060262	Microbotryum violaceum	29.98	6.00e-52	196.00
IUUC-Mmr-061688	Microcebus murinus	30.84	6.00e-43	165.00
IUUC-Mdo-062154	Monodelphis domestica	31.69	9.00e-57	211.00
IUUC-Mmu-064232	Mus musculus	32.69	2.00e-49	187.00
IUUC-Mac-065091	Musa acuminata	36.03	6.00e-64	235.00
IUUC-Mpu-066747	Mustela putorius furo	29.74	3.00e-37	146.00
IUUC-Mlu-067799	Myotis lucifugus	30.70	8.00e-44	168.00
IUUC-Nfi-068371	Neosartorya fischeri	42.68	3.00e-12	62.00
IUUC-Ncr-068704	Neurospora crassa	33.67	1.00e-53	201.00
IUUC-Nle-069054	Nomascus leucogenys	31.47	3.00e-50	189.00
IUUC-Ont-071624	Oreochromis niloticus	28.70	7.00e-49	185.00
IUUC-Oan-072898	Ornithorhynchus anatinus	31.47	8.00e-55	204.00
IUUC-Ocu-074289	Oryctolagus cuniculus	30.99	2.00e-39	153.00
IUUC-Oba-075985	Oryza barthii	33.78	3.00e-57	213.00
IUUC-Obr-076887	Oryza brachyantha	33.11	9.00e-59	218.00
IUUC-Ogl-077823	Oryza glaberrima	33.78	3.00e-57	213.00
IUUC-Ogu-078412	Oryza glumaepatula	35.10	3.00e-51	193.00
IUUC-Oin-079569	Oryza indica	34.58	8.00e-38	149.00
IUUC-Olo-080249	Oryza longistaminata	34.25	4.00e-38	150.00
IUUC-Ome-081240	Oryza meridionalis	34.62	9.00e-51	192.00
IUUC-Oni-082152	Oryza nivara	35.10	5.00e-51	192.00
IUUC-Opu-084011	Oryza punctata	34.15	4.00e-57	213.00
IUUC-Oru-084719	Oryza rufipogon	35.10	3.00e-51	193.00
IUUC-Osa-085286	Oryza sativa	33.78	3.00e-57	213.00
IUUC-Ola-086525	Oryzias latipes	30.00	1.00e-40	158.00
IUUC-Olu-087876	Ostreococcus lucimarinus	30.43	2.00e-45	174.00
IUUC-Oga-088125	Otolemur garnettii	32.28	8.00e-49	185.00
IUUC-Oar-089701	Ovis aries	30.60	7.00e-50	188.00
IUUC-Ptr-091218	Pan troglodytes	30.90	3.00e-49	186.00
IUUC-Pan-091755	Papio anubis	31.12	2.00e-49	187.00
IUUC-Psi-094061	Pelodiscus sinensis	30.26	9.00e-55	204.00
IUUC-Pma-094430	Petromyzon marinus	31.15	9.00e-37	144.00
IUUC-Pno-094900	Phaeosphaeria nodorum	30.73	1.00e-18	85.50
IUUC-Ppa-095895	Physcomitrella patens	34.61	3.00e-70	256.00
IUUC-Pfo-096297	Poecilia formosa	29.62	4.00e-33	132.00
IUUC-Pab-097717	Pongo abelii	31.12	2.00e-49	187.00
IUUC-Pop-098938	Populus trichocarpa	34.99	5.00e-65	239.00
IUUC-Pca-100389	Procavia capensis	32.90	2.00e-39	154.00
IUUC-Ppe-102045	Prunus persica	34.22	2.00e-61	227.00
IUUC-Pva-102357	Pteropus vampyrus	35.12	6.00e-20	88.20
IUUC-Pgr-103399	Puccinia graminis	31.08	1.00e-57	214.00
IUUC-Ptt-103872	Puccinia triticina	32.82	3.00e-60	223.00
IUUC-Pte-104092	Pyrenophora teres	33.43	6.00e-44	169.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	34.01	3.00e-43	166.00
IUUC-Rno-105515	Rattus norvegicus	32.26	2.00e-50	191.00
IUUC-Sce-106434	Saccharomyces cerevisiae	31.39	2.00e-58	217.00
IUUC-Sha-106808	Sarcophilus harrisii	32.40	3.00e-58	216.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	28.70	2.00e-47	181.00
IUUC-Spo-108044	Schizosaccharomyces pombe	30.68	4.00e-53	199.00
IUUC-Smo-109581	Selaginella moellendorffii	35.81	2.00e-63	234.00
IUUC-Sit-110704	Setaria italica	34.45	1.00e-60	224.00
IUUC-Sly-110990	Solanum lycopersicum	35.94	5.00e-54	201.00
IUUC-Stu-112542	Solanum tuberosum	36.99	5.00e-34	135.00
IUUC-Sar-113766	Sorex araneus	33.64	6.00e-45	172.00
IUUC-Sbi-114016	Sorghum bicolor	35.57	3.00e-58	216.00
IUUC-Sre-115099	Sporisorium reilianum	31.04	1.00e-56	211.00
IUUC-Ssc-115277	Sus scrofa	33.07	1.00e-48	184.00
IUUC-Tgu-117343	Taeniopygia guttata	28.97	1.00e-51	194.00
IUUC-Tru-118397	Takifugu rubripes	28.26	2.00e-47	180.00
IUUC-Tni-120272	Tetraodon nigroviridis	29.20	7.00e-51	192.00
IUUC-Tca-121514	Theobroma cacao	35.94	7.00e-64	235.00
IUUC-Tre-121990	Trichoderma reesei	34.57	1.00e-53	201.00
IUUC-Tvi-122504	Trichoderma virens	36.73	3.00e-53	199.00
IUUC-Tae-123153	Triticum aestivum	31.54	1.00e-56	211.00
IUUC-Tur-126693	Triticum urartu	37.87	2.00e-49	187.00
IUUC-Tme-127011	Tuber melanosporum	32.92	8.00e-54	202.00
IUUC-Tbe-127939	Tupaia belangeri	31.68	2.00e-49	187.00
IUUC-Ttr-128889	Tursiops truncatus	30.59	4.00e-38	149.00
IUUC-Uma-129450	Ustilago maydis	32.14	2.00e-59	220.00
IUUC-Vda-129919	Verticillium dahliae	34.90	1.00e-47	181.00
IUUC-Vvi-130928	Vitis vinifera	34.98	2.00e-63	234.00
IUUC-Xtr-131891	Xenopus tropicalis	30.09	6.00e-48	182.00
IUUC-Xma-133260	Xiphophorus maculatus	29.23	2.00e-32	130.00
IUUC-Yli-134578	Yarrowia lipolytica	29.53	7.00e-52	195.00
IUUC-Zma-135427	Zea mays	35.57	1.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence