iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110990

Ensembl Protein ID

Solyc04g054700.2.1

UniProt Accession

K4BSL8; K4BSL8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g054700.2	Solyc04g054700.2.1	Solyc04g054700.2.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	45.42	2.00e-69	257.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVVVARQVEA YIREFFDQNP LSQIGLVILK DGVAHCLTDL GGSPEAHIKA LMGKLGTSGD 60
ASLQNGLDLV CDLLNQIPSY GHREALILYS ALSTCDPGDI LETIQKCKAS KIRCSVIGLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGCAGAAA TGGATTATAA ACCAAGCCGA ATGGTTGTAG TTGCTAGACA AGTGGAGGCT 60
TATATAAGAG AATTTTTTGA CCAGAATCCC CTGAGTCAAA TTGGCTTGGT GATCTTGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	68.75	2.00e-76	278.00
IUUC-Aml-002041	Ailuropoda melanoleuca	45.63	4.00e-63	234.00
IUUC-Atr-003056	Amborella trichopoda	72.93	2.00e-136	477.00
IUUC-Apl-003464	Anas platyrhynchos	44.23	3.00e-62	231.00
IUUC-Aca-004745	Anolis carolinensis	46.77	5.00e-62	230.00
IUUC-Aly-005559	Arabidopsis lyrata	76.10	1.00e-134	472.00
IUUC-Ath-007556	Arabidopsis thaliana	75.79	1.00e-133	468.00
IUUC-Ago-007851	Ashbya gossypii	43.46	3.00e-67	248.00
IUUC-Acl-008100	Aspergillus clavatus	41.08	2.00e-66	246.00
IUUC-Afl-008649	Aspergillus flavus	45.00	2.00e-11	58.90
IUUC-Afu-009066	Aspergillus fumigatus	38.67	1.00e-64	239.00
IUUC-Ani-009372	Aspergillus nidulans	40.88	2.00e-67	249.00
IUUC-Ang-009726	Aspergillus niger	40.31	1.00e-67	249.00
IUUC-Aor-010135	Aspergillus oryzae	39.63	5.00e-65	241.00
IUUC-Ate-010399	Aspergillus terreus	39.24	5.00e-12	63.50
IUUC-Ame-011618	Astyanax mexicanus	45.16	5.00e-70	257.00
IUUC-Bgr-012154	Blumeria graminis	38.25	1.00e-58	219.00
IUUC-Bta-012353	Bos taurus	44.98	3.00e-66	244.00
IUUC-Bci-013932	Botrytis cinerea	41.10	9.00e-68	250.00
IUUC-Bdi-014391	Brachypodium distachyon	71.43	4.00e-118	417.00
IUUC-Bol-015128	Brassica oleracea	75.16	6.00e-135	473.00
IUUC-Bra-017932	Brassica rapa	75.79	1.00e-135	475.00
IUUC-Cel-018649	Caenorhabditis elegans	40.97	2.00e-54	205.00
IUUC-Cja-018776	Callithrix jacchus	45.63	9.00e-64	236.00
IUUC-Cfa-020584	Canis familiaris	45.95	5.00e-64	237.00
IUUC-Cpo-021300	Cavia porcellus	45.95	2.00e-63	235.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	52.15	3.00e-78	284.00
IUUC-Csa-024092	Chlorocebus sabaeus	45.63	9.00e-63	233.00
IUUC-Cho-024919	Choloepus hoffmanni	42.38	2.00e-37	147.00
IUUC-Cin-025386	Ciona intestinalis	42.36	2.00e-64	239.00
IUUC-Csv-026295	Ciona savignyi	40.13	2.00e-60	225.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	36.78	3.00e-58	218.00
IUUC-Cne-026956	Cryptococcus neoformans	37.35	1.00e-60	226.00
IUUC-Cme-027150	Cyanidioschyzon merolae	35.63	2.00e-51	196.00
IUUC-Dre-027962	Danio rerio	44.66	2.00e-70	258.00
IUUC-Dno-029979	Dasypus novemcinctus	43.55	4.00e-60	224.00
IUUC-Dse-031405	Dothistroma septosporum	40.91	7.00e-67	247.00
IUUC-Dme-031710	Drosophila melanogaster	42.06	4.00e-69	254.00
IUUC-Ete-032631	Echinops telfairi	42.39	1.00e-57	216.00
IUUC-Eca-034054	Equus caballus	46.60	3.00e-65	241.00
IUUC-Fca-035724	Felis catus	45.57	1.00e-66	246.00
IUUC-Fal-036987	Ficedula albicollis	45.63	2.00e-71	261.00
IUUC-Fox-037692	Fusarium oxysporum	42.73	5.00e-69	254.00
IUUC-Fso-038442	Fusarium solani	43.47	1.00e-71	262.00
IUUC-Gmo-039273	Gadus morhua	45.02	2.00e-69	254.00
IUUC-Ggr-040009	Gaeumannomyces graminis	40.47	9.00e-52	197.00
IUUC-Gga-041089	Gallus gallus	44.16	4.00e-70	257.00
IUUC-Gac-041978	Gasterosteus aculeatus	43.73	1.00e-64	239.00
IUUC-Gma-043371	Glycine max	75.32	1.00e-146	511.00
IUUC-Hsa-046001	Homo sapiens	45.63	2.00e-62	231.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	46.93	3.00e-70	258.00
IUUC-Kpa-049235	Komagataella pastoris	39.57	9.00e-59	220.00
IUUC-Lch-049926	Latimeria chalumnae	44.81	1.00e-66	245.00
IUUC-Lpe-051352	Leersia perrieri	71.61	4.00e-113	400.00
IUUC-Loc-051987	Lepisosteus oculatus	43.67	1.00e-69	255.00
IUUC-Lma-053171	Leptosphaeria maculans	34.17	2.00e-55	209.00
IUUC-Laf-054372	Loxodonta africana	44.98	1.00e-66	245.00
IUUC-Mcc-055108	Macaca mulatta	45.63	1.00e-62	233.00
IUUC-Mor-056990	Magnaporthe oryzae	36.91	2.00e-61	229.00
IUUC-Mtr-058401	Medicago truncatula	75.08	1.00e-143	502.00
IUUC-Mla-059186	Melampsora laricipopulina	39.32	2.00e-65	242.00
IUUC-Mvi-060262	Microbotryum violaceum	42.14	2.00e-67	249.00
IUUC-Mmr-061688	Microcebus murinus	40.20	1.00e-51	196.00
IUUC-Mdo-062154	Monodelphis domestica	46.28	7.00e-68	250.00
IUUC-Mmu-064232	Mus musculus	45.48	2.00e-62	232.00
IUUC-Mac-065091	Musa acuminata	72.90	8.00e-124	436.00
IUUC-Mpu-066747	Mustela putorius furo	45.45	9.00e-52	196.00
IUUC-Mlu-067799	Myotis lucifugus	41.69	1.00e-51	196.00
IUUC-Nfi-068371	Neosartorya fischeri	41.79	3.00e-11	60.10
IUUC-Ncr-068704	Neurospora crassa	40.99	3.00e-67	248.00
IUUC-Nle-069054	Nomascus leucogenys	45.95	2.00e-63	235.00
IUUC-Ont-071624	Oreochromis niloticus	45.45	9.00e-69	253.00
IUUC-Oan-072898	Ornithorhynchus anatinus	45.31	2.00e-68	251.00
IUUC-Ocu-074289	Oryctolagus cuniculus	44.64	4.00e-47	181.00
IUUC-Oba-075985	Oryza barthii	69.23	3.00e-111	394.00
IUUC-Obr-076887	Oryza brachyantha	69.87	4.00e-115	407.00
IUUC-Ogl-077823	Oryza glaberrima	69.23	3.00e-111	394.00
IUUC-Ogu-078412	Oryza glumaepatula	73.36	3.00e-95	341.00
IUUC-Oin-079569	Oryza indica	67.41	4.00e-74	271.00
IUUC-Olo-080249	Oryza longistaminata	70.00	3.00e-73	268.00
IUUC-Ome-081240	Oryza meridionalis	72.95	3.00e-94	338.00
IUUC-Oni-082152	Oryza nivara	73.36	1.00e-94	339.00
IUUC-Opu-084011	Oryza punctata	69.23	1.00e-110	392.00
IUUC-Oru-084719	Oryza rufipogon	64.10	1.00e-98	352.00
IUUC-Osa-085286	Oryza sativa	69.23	3.00e-111	394.00
IUUC-Ola-086525	Oryzias latipes	39.41	3.00e-54	205.00
IUUC-Olu-087876	Ostreococcus lucimarinus	47.54	2.00e-68	251.00
IUUC-Oga-088125	Otolemur garnettii	44.66	5.00e-65	240.00
IUUC-Oar-089701	Ovis aries	44.98	4.00e-66	244.00
IUUC-Ptr-091218	Pan troglodytes	45.31	1.00e-62	232.00
IUUC-Pan-091755	Papio anubis	45.63	1.00e-62	233.00
IUUC-Psi-094061	Pelodiscus sinensis	46.28	4.00e-68	250.00
IUUC-Pma-094430	Petromyzon marinus	47.31	2.00e-41	161.00
IUUC-Pno-094900	Phaeosphaeria nodorum	36.82	5.00e-31	129.00
IUUC-Ppa-095895	Physcomitrella patens	63.84	4.00e-124	437.00
IUUC-Pfo-096297	Poecilia formosa	47.31	2.00e-40	158.00
IUUC-Pab-097717	Pongo abelii	45.63	1.00e-62	233.00
IUUC-Pop-098938	Populus trichocarpa	79.29	2.00e-134	471.00
IUUC-Pca-100389	Procavia capensis	40.65	2.00e-55	208.00
IUUC-Ppe-102045	Prunus persica	81.29	3.00e-138	483.00
IUUC-Pva-102357	Pteropus vampyrus	49.76	6.00e-39	152.00
IUUC-Pgr-103399	Puccinia graminis	40.91	6.00e-65	240.00
IUUC-Ptt-103872	Puccinia triticina	40.61	2.00e-65	242.00
IUUC-Pte-104092	Pyrenophora teres	39.36	2.00e-53	202.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	40.07	2.00e-53	202.00
IUUC-Rno-105515	Rattus norvegicus	45.16	9.00e-66	243.00
IUUC-Sce-106434	Saccharomyces cerevisiae	46.08	6.00e-71	260.00
IUUC-Sha-106808	Sarcophilus harrisii	45.63	3.00e-66	244.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	41.97	2.00e-60	225.00
IUUC-Spo-108044	Schizosaccharomyces pombe	43.09	2.00e-70	258.00
IUUC-Smo-109581	Selaginella moellendorffii	59.74	2.00e-112	397.00
IUUC-Sit-110704	Setaria italica	70.51	4.00e-118	417.00
IUUC-Stu-112542	Solanum tuberosum	97.20	6.00e-79	286.00
IUUC-Sar-113766	Sorex araneus	45.97	7.00e-56	209.00
IUUC-Sbi-114016	Sorghum bicolor	71.75	8.00e-117	412.00
IUUC-Sre-115099	Sporisorium reilianum	34.30	3.00e-56	212.00
IUUC-Ssc-115277	Sus scrofa	45.63	2.00e-60	225.00
IUUC-Tgu-117343	Taeniopygia guttata	45.31	7.00e-71	260.00
IUUC-Tru-118397	Takifugu rubripes	44.59	4.00e-65	241.00
IUUC-Tni-120272	Tetraodon nigroviridis	44.37	2.00e-63	235.00
IUUC-Tca-121514	Theobroma cacao	81.03	4.00e-150	523.00
IUUC-Tre-121990	Trichoderma reesei	42.55	6.00e-65	240.00
IUUC-Tvi-122504	Trichoderma virens	41.98	2.00e-64	239.00
IUUC-Tae-123153	Triticum aestivum	71.52	2.00e-117	415.00
IUUC-Tur-126693	Triticum urartu	74.18	6.00e-108	383.00
IUUC-Tme-127011	Tuber melanosporum	42.45	2.00e-65	242.00
IUUC-Tbe-127939	Tupaia belangeri	45.31	6.00e-63	233.00
IUUC-Ttr-128889	Tursiops truncatus	38.83	7.00e-51	193.00
IUUC-Uma-129450	Ustilago maydis	33.82	2.00e-56	213.00
IUUC-Vda-129919	Verticillium dahliae	39.69	5.00e-61	227.00
IUUC-Vvi-130928	Vitis vinifera	80.76	3.00e-138	484.00
IUUC-Xtr-131891	Xenopus tropicalis	41.08	2.00e-59	222.00
IUUC-Xma-133260	Xiphophorus maculatus	46.71	7.00e-40	156.00
IUUC-Yli-134578	Yarrowia lipolytica	41.67	8.00e-59	220.00
IUUC-Zma-135427	Zea mays	71.75	6.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence