iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Laf-054435

UUCD1 version

UUC-LoA-00584

Ensembl Protein ID

ENSLAFP00000014223.2

UniProt Accession

G3THY8; G3THY8_LOXAF

Protein Name

Uncharacterized protein

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000016968.2	ENSLAFT00000016966.2	ENSLAFP00000014223.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	2.20e-16	59.8	180	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 180  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 227
           67899.**********************888...***************976 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MGTQGSPVKS FDYLLKFLLV GDSDVGKGEI LESLQDGASE SPYAYSNGID YKTTTILLDG 60
RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNRW SFDGIDRWIK EIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGACGC AGGGCAGCCC GGTGAAGAGC TTCGACTACC TGCTCAAGTT CCTCCTGGTG 60
GGCGACAGCG ACGTGGGCAA GGGCGAGATC CTCGAGAGCC TGCAGGACGG CGCCTCTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

KEGG

lav:100654443

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	95.91	7.00e-142	496.00
IUUC-Apl-003799	Anas platyrhynchos	89.39	4.00e-129	453.00
IUUC-Ame-011203	Astyanax mexicanus	92.88	3.00e-156	543.00
IUUC-Bta-013490	Bos taurus	97.51	1.00e-150	525.00
IUUC-Cja-019990	Callithrix jacchus	96.45	1.00e-148	518.00
IUUC-Cpo-022437	Cavia porcellus	96.32	3.00e-142	497.00
IUUC-Csa-024147	Chlorocebus sabaeus	97.15	4.00e-150	523.00
IUUC-Dre-027427	Danio rerio	93.24	6.00e-156	542.00
IUUC-Dno-029998	Dasypus novemcinctus	92.80	5.00e-116	412.00
IUUC-Dor-030584	Dipodomys ordii	87.55	3.00e-108	384.00
IUUC-Dme-031810	Drosophila melanogaster	68.75	4.00e-94	337.00
IUUC-Ete-033080	Echinops telfairi	98.22	1.00e-143	502.00
IUUC-Eca-033423	Equus caballus	97.01	1.00e-125	441.00
IUUC-Eeu-034590	Erinaceus europaeus	89.27	8.00e-111	392.00
IUUC-Fca-035697	Felis catus	97.01	3.00e-121	427.00
IUUC-Fal-037070	Ficedula albicollis	96.80	3.00e-150	523.00
IUUC-Gmo-039605	Gadus morhua	91.81	2.00e-154	537.00
IUUC-Gga-040343	Gallus gallus	96.80	3.00e-150	523.00
IUUC-Gac-041833	Gasterosteus aculeatus	87.76	1.00e-143	501.00
IUUC-Ggo-045131	Gorilla gorilla	89.68	9.00e-133	465.00
IUUC-Hsa-046237	Homo sapiens	97.15	4.00e-150	523.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	96.80	1.00e-150	525.00
IUUC-Lch-050193	Latimeria chalumnae	94.66	8.00e-158	548.00
IUUC-Loc-052243	Lepisosteus oculatus	93.24	5.00e-156	543.00
IUUC-Mcc-055337	Macaca mulatta	96.80	5.00e-149	519.00
IUUC-Meu-056731	Macropus eugenii	95.81	5.00e-80	290.00
IUUC-Mmr-061380	Microcebus murinus	97.13	2.00e-149	521.00
IUUC-Mdo-062438	Monodelphis domestica	96.80	3.00e-150	523.00
IUUC-Mmu-064046	Mus musculus	97.15	1.00e-150	525.00
IUUC-Mpu-066029	Mustela putorius furo	94.02	8.00e-122	429.00
IUUC-Mlu-067741	Myotis lucifugus	97.86	3.00e-151	527.00
IUUC-Nle-069240	Nomascus leucogenys	91.10	4.00e-137	479.00
IUUC-Ont-071248	Oreochromis niloticus	93.24	2.00e-155	541.00
IUUC-Oan-073432	Ornithorhynchus anatinus	96.17	2.00e-121	428.00
IUUC-Olo-080270	Oryza longistaminata	34.41	4.00e-12	65.50
IUUC-Ola-086486	Oryzias latipes	84.62	9.00e-141	492.00
IUUC-Oga-088293	Otolemur garnettii	97.15	1.00e-150	525.00
IUUC-Ptr-090720	Pan troglodytes	97.15	4.00e-150	523.00
IUUC-Pan-091732	Papio anubis	97.15	4.00e-150	523.00
IUUC-Psi-093627	Pelodiscus sinensis	96.09	1.00e-143	501.00
IUUC-Pma-094679	Petromyzon marinus	77.41	7.00e-110	389.00
IUUC-Pfo-097105	Poecilia formosa	92.53	1.00e-154	538.00
IUUC-Pab-098054	Pongo abelii	97.15	4.00e-150	523.00
IUUC-Pca-100775	Procavia capensis	99.48	2.00e-90	324.00
IUUC-Pva-102658	Pteropus vampyrus	97.51	2.00e-150	524.00
IUUC-Rno-105303	Rattus norvegicus	97.15	1.00e-150	525.00
IUUC-Sha-106536	Sarcophilus harrisii	96.80	3.00e-150	523.00
IUUC-Tgu-116858	Taeniopygia guttata	98.96	2.00e-113	400.00
IUUC-Tru-118264	Takifugu rubripes	76.49	1.00e-142	498.00
IUUC-Tni-120350	Tetraodon nigroviridis	92.17	4.00e-154	536.00
IUUC-Ttr-129236	Tursiops truncatus	97.51	5.00e-152	530.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence