iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107411

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01214546

Gene Name

TRIM60

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000005338.1	ENSSHAT00000006189.1	ENSSHAP00000006135.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-06	28.3	10	68
E3 activity/RING/RING	6.40e-09	36.4	13	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltl 61
           e  C+I l+  +dPv++ +G+ + rs+I ++ ++ ++   cPv+r++++ +++  n  l
   Q: 10   EASCAICLDYLNDPVTIDCGHNFCRSCILRCWEELEErfPCPVCRRHFALRSFRTNRQL 68
           568****************************977777789********99999888776 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           CaiCl+ + d p++ +CgH f+++C+  +w     +   +f CP+Cr
   Q: 13   CAICLDYLND-PVTIDCGHNFCRSCIlRCW----EELEERFPCPVCR 54
           **********.999***********99***....899*********8 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

ASALESLQVE ASCAICLDYL NDPVTIDCGH NFCRSCILRC WEELEERFPC PVCRRHFALR 60
SFRTNRQLGN VAEIARKLSP KRSKRRRPEE AVCEKHQQAL SLFCEKEREV VCLVCCISCE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGAGCGCCC TGGAGAGCCT CCAAGTGGAG GCGAGCTGCG CCATCTGCCT GGACTACCTG 60
AACGACCCGG TGACCATCGA CTGCGGCCAC AACTTCTGCC GCTCCTGCAT CCTGCGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001603	Ailuropoda melanoleuca	53.40	2.00e-149	522.00
IUUC-Apl-003354	Anas platyrhynchos	44.67	5.00e-109	387.00
IUUC-Aca-005381	Anolis carolinensis	50.10	3.00e-129	455.00
IUUC-Ame-011964	Astyanax mexicanus	34.06	2.00e-65	243.00
IUUC-Cja-019323	Callithrix jacchus	53.09	7.00e-145	506.00
IUUC-Cfa-020342	Canis familiaris	53.30	5.00e-149	520.00
IUUC-Cpo-021902	Cavia porcellus	44.23	1.00e-99	356.00
IUUC-Csa-023186	Chlorocebus sabaeus	53.30	1.00e-149	522.00
IUUC-Cho-024697	Choloepus hoffmanni	47.78	2.00e-129	456.00
IUUC-Dre-028792	Danio rerio	33.19	7.00e-67	248.00
IUUC-Dno-029090	Dasypus novemcinctus	52.09	2.00e-135	475.00
IUUC-Dor-030243	Dipodomys ordii	38.55	7.00e-89	320.00
IUUC-Ete-032936	Echinops telfairi	50.92	3.00e-82	298.00
IUUC-Eca-033513	Equus caballus	50.78	5.00e-126	444.00
IUUC-Fca-035406	Felis catus	53.30	4.00e-149	521.00
IUUC-Gmo-038512	Gadus morhua	35.54	1.00e-64	240.00
IUUC-Gga-040491	Gallus gallus	44.19	7.00e-102	364.00
IUUC-Gac-041608	Gasterosteus aculeatus	35.54	6.00e-63	234.00
IUUC-Ggo-044526	Gorilla gorilla	50.50	1.00e-145	509.00
IUUC-Hsa-045719	Homo sapiens	50.50	1.00e-145	509.00
IUUC-Itr-048404	Ictidomys tridecemlineatus	52.41	9.00e-148	516.00
IUUC-Lch-049668	Latimeria chalumnae	39.18	6.00e-85	307.00
IUUC-Loc-052206	Lepisosteus oculatus	37.42	1.00e-82	300.00
IUUC-Laf-054295	Loxodonta africana	53.50	1.00e-150	526.00
IUUC-Mcc-055765	Macaca mulatta	51.02	5.00e-146	510.00
IUUC-Mmr-061705	Microcebus murinus	45.96	4.00e-118	417.00
IUUC-Mdo-062936	Monodelphis domestica	52.67	1.00e-137	482.00
IUUC-Mmu-063767	Mus musculus	53.30	1.00e-149	522.00
IUUC-Mpu-066160	Mustela putorius furo	53.40	2.00e-149	522.00
IUUC-Mlu-068022	Myotis lucifugus	45.91	2.00e-118	418.00
IUUC-Nle-069929	Nomascus leucogenys	50.33	4.00e-130	457.00
IUUC-Opr-070394	Ochotona princeps	49.80	2.00e-143	502.00
IUUC-Ont-072259	Oreochromis niloticus	34.79	2.00e-66	246.00
IUUC-Oan-072828	Ornithorhynchus anatinus	78.97	0.00e+00	756.00
IUUC-Ocu-074204	Oryctolagus cuniculus	47.53	9.00e-127	446.00
IUUC-Ola-086686	Oryzias latipes	44.71	2.00e-45	176.00
IUUC-Oga-088422	Otolemur garnettii	50.72	3.00e-138	484.00
IUUC-Oar-089277	Ovis aries	51.81	9.00e-138	483.00
IUUC-Ptr-090853	Pan troglodytes	50.50	1.00e-145	509.00
IUUC-Pan-091993	Papio anubis	53.30	1.00e-149	522.00
IUUC-Psi-092975	Pelodiscus sinensis	51.84	6.00e-119	420.00
IUUC-Pfo-096858	Poecilia formosa	35.92	7.00e-73	268.00
IUUC-Pab-097944	Pongo abelii	53.30	1.00e-149	522.00
IUUC-Pca-100795	Procavia capensis	47.81	3.00e-94	338.00
IUUC-Pva-103180	Pteropus vampyrus	49.50	9.00e-144	503.00
IUUC-Rno-105736	Rattus norvegicus	52.62	2.00e-147	515.00
IUUC-Sar-113371	Sorex araneus	49.39	4.00e-113	400.00
IUUC-Ssc-116025	Sus scrofa	53.30	1.00e-149	523.00
IUUC-Tgu-116998	Taeniopygia guttata	44.89	2.00e-92	333.00
IUUC-Tsy-119072	Tarsius syrichta	50.60	2.00e-93	335.00
IUUC-Tni-120295	Tetraodon nigroviridis	35.85	2.00e-67	249.00
IUUC-Vpa-130803	Vicugna pacos	50.20	3.00e-145	508.00
IUUC-Xtr-132440	Xenopus tropicalis	34.64	6.00e-81	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence