iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126658

Ensembl Protein ID

TRIUR3_04921-P1

UniProt Accession

M7YMK3; M7YMK3_TRIUA

Genbank Protein ID

EMS48146.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

KD251755

Gene Name

TRIUR3_04921

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_04921	TRIUR3_04921-T1	TRIUR3_04921-P1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	36.43	3.00e-41	166.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Triticum urartu

Protein Sequence
(Fasta)

MAHTYPIGHN PYLSPHCLVG HSFVRRPDQA ERVIGTLLGS VLPDGTVHVR NAYVVPHSES 60
ADQVALDIEY HHNMYASHQK ADIGSVSIQG HSNQRLRVAA KANLARFSTG FGVSGGSTLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCACA CATATCCAAT CGGGCATAAC CCCTACCTTT CCCCTCACTG TCTTGTGGGG 60
CATAGGTACC CCCTCCGAAC ATAGCTCCCC CTCGTACCAC CTACACACAC CTGCTAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0016020--C:membrane
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0009793--P:embryo development ending in seed dormancy
GO:0009846--P:pollen germination
GO:0009744--P:response to sucrose

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	77.52	7.00e-123	432.00
IUUC-Aml-001527	Ailuropoda melanoleuca	36.43	3.00e-46	177.00
IUUC-Atr-002686	Amborella trichopoda	63.97	4.00e-87	313.00
IUUC-Apl-003977	Anas platyrhynchos	33.76	6.00e-39	152.00
IUUC-Aca-004335	Anolis carolinensis	35.21	5.00e-47	180.00
IUUC-Aly-005945	Arabidopsis lyrata	65.44	4.00e-95	339.00
IUUC-Ath-007045	Arabidopsis thaliana	64.34	8.00e-94	335.00
IUUC-Acl-008365	Aspergillus clavatus	32.06	4.00e-34	137.00
IUUC-Afl-008742	Aspergillus flavus	31.36	7.00e-32	130.00
IUUC-Afu-009030	Aspergillus fumigatus	31.71	1.00e-33	136.00
IUUC-Ani-009212	Aspergillus nidulans	31.65	4.00e-33	134.00
IUUC-Ang-009712	Aspergillus niger	31.31	2.00e-33	135.00
IUUC-Aor-009885	Aspergillus oryzae	31.36	4.00e-33	134.00
IUUC-Ate-010315	Aspergillus terreus	31.31	1.00e-31	129.00
IUUC-Ame-010801	Astyanax mexicanus	27.57	1.00e-12	66.20
IUUC-Bgr-011982	Blumeria graminis	31.05	8.00e-33	133.00
IUUC-Bta-012804	Bos taurus	35.76	2.00e-46	178.00
IUUC-Bci-013891	Botrytis cinerea	31.64	1.00e-25	109.00
IUUC-Bdi-014328	Brachypodium distachyon	76.22	7.00e-119	419.00
IUUC-Bol-015446	Brassica oleracea	63.97	2.00e-94	338.00
IUUC-Bra-016862	Brassica rapa	63.24	3.00e-93	333.00
IUUC-Cel-018171	Caenorhabditis elegans	24.37	1.00e-17	82.40
IUUC-Cja-019335	Callithrix jacchus	35.76	2.00e-46	178.00
IUUC-Cfa-020138	Canis familiaris	36.06	9.00e-46	176.00
IUUC-Cpo-022109	Cavia porcellus	33.70	1.00e-35	142.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	38.04	4.00e-50	190.00
IUUC-Csa-023994	Chlorocebus sabaeus	35.76	2.00e-46	178.00
IUUC-Cho-024351	Choloepus hoffmanni	27.43	2.00e-22	99.00
IUUC-Cin-025801	Ciona intestinalis	33.58	6.00e-42	163.00
IUUC-Csv-025805	Ciona savignyi	35.07	5.00e-43	167.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	27.97	4.00e-27	114.00
IUUC-Cne-026868	Cryptococcus neoformans	25.86	5.00e-17	80.90
IUUC-Cme-027328	Cyanidioschyzon merolae	25.81	1.00e-16	79.70
IUUC-Dre-028085	Danio rerio	34.51	1.00e-45	175.00
IUUC-Dno-030099	Dasypus novemcinctus	36.43	5.00e-46	177.00
IUUC-Dor-030324	Dipodomys ordii	32.34	2.00e-36	145.00
IUUC-Dse-031314	Dothistroma septosporum	32.73	1.00e-34	139.00
IUUC-Dme-031926	Drosophila melanogaster	34.69	6.00e-42	163.00
IUUC-Ete-032569	Echinops telfairi	34.96	6.00e-42	163.00
IUUC-Eca-033502	Equus caballus	34.94	8.00e-42	163.00
IUUC-Eeu-034883	Erinaceus europaeus	31.87	9.00e-25	105.00
IUUC-Fca-035873	Felis catus	36.43	3.00e-46	177.00
IUUC-Fal-036921	Ficedula albicollis	36.70	2.00e-47	181.00
IUUC-Fox-037765	Fusarium oxysporum	28.72	3.00e-23	101.00
IUUC-Fso-038240	Fusarium solani	28.37	3.00e-22	98.20
IUUC-Gmo-038864	Gadus morhua	35.19	1.00e-47	182.00
IUUC-Ggr-039862	Gaeumannomyces graminis	27.34	6.00e-21	94.00
IUUC-Gga-040952	Gallus gallus	36.01	1.00e-47	182.00
IUUC-Gac-041677	Gasterosteus aculeatus	37.13	4.00e-49	187.00
IUUC-Gma-043061	Glycine max	66.91	1.00e-90	325.00
IUUC-Ggo-045591	Gorilla gorilla	35.76	2.00e-46	178.00
IUUC-Hsa-046860	Homo sapiens	35.76	2.00e-46	178.00
IUUC-Hvu-047410	Hordeum vulgare	100.00	2.00e-84	303.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	36.80	1.00e-46	179.00
IUUC-Lch-049410	Latimeria chalumnae	32.85	3.00e-24	104.00
IUUC-Lpe-051102	Leersia perrieri	76.47	3.00e-118	416.00
IUUC-Loc-052016	Lepisosteus oculatus	35.56	3.00e-45	174.00
IUUC-Lma-053157	Leptosphaeria maculans	30.82	6.00e-35	140.00
IUUC-Laf-054568	Loxodonta africana	35.76	3.00e-46	177.00
IUUC-Mcc-054613	Macaca mulatta	35.76	2.00e-46	178.00
IUUC-Meu-056832	Macropus eugenii	31.71	2.00e-16	77.80
IUUC-Mor-057104	Magnaporthe oryzae	26.99	9.00e-22	96.70
IUUC-Mtr-058445	Medicago truncatula	67.65	4.00e-109	386.00
IUUC-Mla-059038	Melampsora laricipopulina	26.39	3.00e-22	97.80
IUUC-Mga-059548	Meleagris gallopavo	34.57	1.00e-41	161.00
IUUC-Mvi-060520	Microbotryum violaceum	22.73	2.00e-08	52.00
IUUC-Mdo-062376	Monodelphis domestica	35.69	6.00e-47	180.00
IUUC-Mmu-063254	Mus musculus	36.80	5.00e-47	180.00
IUUC-Mac-065635	Musa acuminata	61.75	2.00e-94	337.00
IUUC-Mpu-066314	Mustela putorius furo	36.43	3.00e-46	177.00
IUUC-Mlu-067512	Myotis lucifugus	36.33	6.00e-46	177.00
IUUC-Nfi-068262	Neosartorya fischeri	31.71	8.00e-34	136.00
IUUC-Ncr-068872	Neurospora crassa	28.77	4.00e-22	98.20
IUUC-Nle-070118	Nomascus leucogenys	36.43	3.00e-46	177.00
IUUC-Opr-071228	Ochotona princeps	34.69	1.00e-41	161.00
IUUC-Ont-072600	Oreochromis niloticus	34.81	9.00e-48	182.00
IUUC-Oan-073584	Ornithorhynchus anatinus	33.47	2.00e-41	160.00
IUUC-Ocu-074542	Oryctolagus cuniculus	36.43	9.00e-47	179.00
IUUC-Oba-075923	Oryza barthii	76.47	5.00e-118	416.00
IUUC-Obr-076313	Oryza brachyantha	77.94	2.00e-119	420.00
IUUC-Ogl-076932	Oryza glaberrima	76.47	5.00e-118	416.00
IUUC-Ogu-078152	Oryza glumaepatula	76.47	5.00e-118	416.00
IUUC-Oin-079528	Oryza indica	76.47	5.00e-118	416.00
IUUC-Olo-080401	Oryza longistaminata	76.47	5.00e-118	416.00
IUUC-Ome-081553	Oryza meridionalis	76.10	1.00e-117	414.00
IUUC-Oni-082090	Oryza nivara	76.47	5.00e-118	416.00
IUUC-Opu-083583	Oryza punctata	76.84	3.00e-118	416.00
IUUC-Oru-084492	Oryza rufipogon	76.47	5.00e-118	416.00
IUUC-Osa-085383	Oryza sativa	76.47	5.00e-118	416.00
IUUC-Ola-086835	Oryzias latipes	35.19	3.00e-47	181.00
IUUC-Olu-087716	Ostreococcus lucimarinus	30.74	8.00e-31	126.00
IUUC-Oga-088886	Otolemur garnettii	36.43	1.00e-46	179.00
IUUC-Oar-090079	Ovis aries	35.76	2.00e-46	178.00
IUUC-Ptr-091457	Pan troglodytes	35.76	2.00e-46	178.00
IUUC-Pan-092317	Papio anubis	33.50	3.00e-33	134.00
IUUC-Psi-093129	Pelodiscus sinensis	33.96	2.00e-42	165.00
IUUC-Pma-094488	Petromyzon marinus	36.33	2.00e-49	187.00
IUUC-Pno-095049	Phaeosphaeria nodorum	31.48	1.00e-36	146.00
IUUC-Ppa-095341	Physcomitrella patens	51.03	2.00e-86	311.00
IUUC-Pfo-096286	Poecilia formosa	34.44	5.00e-47	180.00
IUUC-Pab-097765	Pongo abelii	35.76	2.00e-46	178.00
IUUC-Pop-099131	Populus trichocarpa	66.54	1.00e-100	357.00
IUUC-Pca-100524	Procavia capensis	34.25	1.00e-29	122.00
IUUC-Ppe-101934	Prunus persica	67.65	7.00e-110	389.00
IUUC-Pva-102577	Pteropus vampyrus	36.70	2.00e-46	178.00
IUUC-Pgr-103521	Puccinia graminis	25.82	7.00e-21	93.60
IUUC-Ptt-103801	Puccinia triticina	24.66	1.20e+00	27.30
IUUC-Pte-104304	Pyrenophora teres	31.48	2.00e-36	145.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	31.48	3.00e-36	144.00
IUUC-Rno-105717	Rattus norvegicus	36.80	5.00e-47	180.00
IUUC-Sha-107190	Sarcophilus harrisii	35.69	8.00e-47	179.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	28.07	7.00e-28	116.00
IUUC-Spo-108355	Schizosaccharomyces pombe	28.32	1.00e-27	115.00
IUUC-Smo-109374	Selaginella moellendorffii	55.00	9.00e-90	322.00
IUUC-Sit-110119	Setaria italica	76.47	9.00e-119	418.00
IUUC-Sly-111570	Solanum lycopersicum	66.54	2.00e-88	317.00
IUUC-Stu-112308	Solanum tuberosum	67.28	2.00e-98	351.00
IUUC-Sar-113515	Sorex araneus	37.89	3.00e-15	73.90
IUUC-Sbi-114605	Sorghum bicolor	77.57	2.00e-119	421.00
IUUC-Sre-114906	Sporisorium reilianum	30.00	3.00e-30	124.00
IUUC-Tgu-117087	Taeniopygia guttata	34.16	3.00e-41	160.00
IUUC-Tru-117700	Takifugu rubripes	34.64	9.00e-49	186.00
IUUC-Tni-120470	Tetraodon nigroviridis	34.07	1.00e-47	182.00
IUUC-Tca-121109	Theobroma cacao	67.65	1.00e-92	331.00
IUUC-Tre-122095	Trichoderma reesei	29.71	7.00e-23	100.00
IUUC-Tvi-122580	Trichoderma virens	29.35	4.00e-22	97.80
IUUC-Tae-125129	Triticum aestivum	86.03	4.00e-130	456.00
IUUC-Tme-127043	Tuber melanosporum	32.62	2.00e-34	138.00
IUUC-Tbe-127927	Tupaia belangeri	36.43	3.00e-46	177.00
IUUC-Ttr-129231	Tursiops truncatus	36.43	2.00e-46	178.00
IUUC-Uma-129578	Ustilago maydis	30.74	9.00e-30	122.00
IUUC-Vda-129730	Verticillium dahliae	28.04	3.00e-26	111.00
IUUC-Vvi-130968	Vitis vinifera	67.16	2.00e-99	354.00
IUUC-Xtr-132203	Xenopus tropicalis	33.80	3.00e-45	174.00
IUUC-Xma-133972	Xiphophorus maculatus	34.44	4.00e-47	180.00
IUUC-Yli-134553	Yarrowia lipolytica	28.47	6.00e-23	100.00
IUUC-Zma-134941	Zea mays	78.68	5.00e-108	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence