iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002183

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01009691

Gene Name

RNF19B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000007422.1	ENSAMET00000008149.1	ENSAMEP00000007821.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	3.90e-45	154.8	3	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 14   tvlleCehtfCkeClkqylelkikegqvteiscpaaecpekleeseikellveeelykryekllleevveadaalkwcpapdCslvvlle 103
           + ll+C h+ C++Cl++yl+l+i+e++ + iscp  ec+e+l++++i+ ll+++ l+++ye+++l+++ ++  + ++c+ pdC ++v++ 
   Q: 3    PRLLSCPHRSCRDCLRHYLRLEISESR-VPISCP--ECSERLNPHDIRLLLADPPLMHKYEEFMLRRYQAERVDERFCTLPDCIYAVIAY 89
           6789***********************.9*****..89**************************************************** PP
   S: 104  kea..eklevecekcgkefCveCkeewHeglsCkelkeklakteeek......eeaeskelleanskkCpkCkvyiek..negCnhmtCa 183
            +a  +kl++e+e+c++efC++Ck++wH++++C+++++++a+t + +       ++ +++  ++++k+Cp+C++yi+k  +++CnhmtCa
   Q: 90   GCAscPKLTCEREGCQTEFCYHCKQIWHPNQTCDMARQQRAQTLRVRtkhtsgLSYGQESGPADDIKPCPRCSAYIIKmnDGSCNHMTCA 179
           999899************************************99988888888888899999***************997889******* PP
   S: 184  kCkaefCwlC 193
            C++efCwlC
   Q: 180  VCGCEFCWLC 189
           ********** PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

RAPRLLSCPH RSCRDCLRHY LRLEISESRV PISCPECSER LNPHDIRLLL ADPPLMHKYE 60
EFMLRRYQAE RVDERFCTLP DCIYAVIAYG CASCPKLTCE REGCQTEFCY HCKQIWHPNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGCCCCGC GCCTCCTCAG CTGTCCGCAC CGCTCGTGCC GGGACTGCCT TCGCCACTAC 60
CTGCGCCTGG AGATCAGCGA GAGCCGGGTG CCCATCAGCT GCCCCGAGTG CAGCGAGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003468	Anas platyrhynchos	88.70	0.00e+00	846.00
IUUC-Aca-004324	Anolis carolinensis	85.67	0.00e+00	927.00
IUUC-Ame-011813	Astyanax mexicanus	64.50	0.00e+00	635.00
IUUC-Bta-013135	Bos taurus	95.57	0.00e+00	1073.00
IUUC-Cja-019264	Callithrix jacchus	85.46	0.00e+00	927.00
IUUC-Cpo-022502	Cavia porcellus	93.66	0.00e+00	939.00
IUUC-Cho-025032	Choloepus hoffmanni	72.88	0.00e+00	698.00
IUUC-Dre-028769	Danio rerio	66.32	0.00e+00	685.00
IUUC-Dor-030551	Dipodomys ordii	93.97	4.00e-114	405.00
IUUC-Ete-033008	Echinops telfairi	99.22	3.00e-144	504.00
IUUC-Eca-033267	Equus caballus	97.34	0.00e+00	929.00
IUUC-Fca-035520	Felis catus	96.96	0.00e+00	924.00
IUUC-Fal-037090	Ficedula albicollis	88.19	0.00e+00	758.00
IUUC-Gga-041229	Gallus gallus	87.63	0.00e+00	743.00
IUUC-Gac-041619	Gasterosteus aculeatus	66.55	0.00e+00	674.00
IUUC-Hsa-045958	Homo sapiens	94.92	0.00e+00	1071.00
IUUC-Itr-048425	Ictidomys tridecemlineatus	94.33	0.00e+00	939.00
IUUC-Lch-049552	Latimeria chalumnae	82.78	0.00e+00	862.00
IUUC-Loc-051738	Lepisosteus oculatus	67.76	0.00e+00	737.00
IUUC-Laf-054252	Loxodonta africana	92.78	0.00e+00	929.00
IUUC-Meu-055920	Macropus eugenii	88.93	0.00e+00	906.00
IUUC-Mga-059587	Meleagris gallopavo	87.62	0.00e+00	802.00
IUUC-Mdo-061985	Monodelphis domestica	90.72	0.00e+00	1025.00
IUUC-Mmu-064262	Mus musculus	93.90	0.00e+00	1048.00
IUUC-Mpu-066101	Mustela putorius furo	96.23	0.00e+00	1098.00
IUUC-Mlu-067347	Myotis lucifugus	95.64	0.00e+00	929.00
IUUC-Ont-071298	Oreochromis niloticus	66.96	0.00e+00	696.00
IUUC-Oan-073219	Ornithorhynchus anatinus	88.93	0.00e+00	863.00
IUUC-Ocu-073792	Oryctolagus cuniculus	92.75	0.00e+00	880.00
IUUC-Ola-086499	Oryzias latipes	65.96	0.00e+00	695.00
IUUC-Oga-088812	Otolemur garnettii	94.96	0.00e+00	1046.00
IUUC-Oar-090353	Ovis aries	94.84	0.00e+00	960.00
IUUC-Psi-092988	Pelodiscus sinensis	89.08	0.00e+00	841.00
IUUC-Pfo-096268	Poecilia formosa	62.36	0.00e+00	692.00
IUUC-Pca-100597	Procavia capensis	95.64	0.00e+00	916.00
IUUC-Pva-102542	Pteropus vampyrus	96.83	4.00e-158	551.00
IUUC-Sha-106512	Sarcophilus harrisii	89.58	0.00e+00	998.00
IUUC-Sar-113233	Sorex araneus	96.02	0.00e+00	887.00
IUUC-Ssc-115781	Sus scrofa	94.43	0.00e+00	1112.00
IUUC-Tgu-117384	Taeniopygia guttata	93.44	0.00e+00	744.00
IUUC-Tru-117919	Takifugu rubripes	65.20	0.00e+00	679.00
IUUC-Tsy-119275	Tarsius syrichta	89.55	0.00e+00	872.00
IUUC-Tbe-127335	Tupaia belangeri	99.19	0.00e+00	665.00
IUUC-Ttr-128554	Tursiops truncatus	95.26	0.00e+00	908.00
IUUC-Vpa-130407	Vicugna pacos	88.47	0.00e+00	890.00
IUUC-Xtr-132325	Xenopus tropicalis	83.52	0.00e+00	677.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence