iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000026187.2	ENSXETT00000061691.1	ENSXETP00000062530.1
ENSXETG00000026187.2	ENSXETT00000055346.1	ENSXETP00000055346.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	36.34	2.00e-66	248.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MDEEPEKTKR WEGGYERTWE VLKEDESGSL KSTIDEILFK DKRKRIFENR GQVRLGMMRH 60
LYVIVDSSRT MEDQDLKPNR LTCTLKLLEY FVEEYFDQNP ISQIGLIVTR NKRAEKLTEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGAAG AACCAGAAAA GACAAAGCGC TGGGAAGGCG GCTATGAAAG AACATGGTAG 60
AGTTCAGATC ACAGTATTTA TTAACTTTGC TTTGTCAAGT TTTACATGAA TTAACCTTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	37.44	6.00e-40	157.00
IUUC-Aml-002041	Ailuropoda melanoleuca	72.29	3.00e-168	584.00
IUUC-Atr-003056	Amborella trichopoda	38.23	3.00e-58	218.00
IUUC-Apl-003464	Anas platyrhynchos	72.25	3.00e-155	540.00
IUUC-Aca-004745	Anolis carolinensis	73.55	2.00e-157	548.00
IUUC-Aly-005559	Arabidopsis lyrata	37.06	2.00e-66	246.00
IUUC-Ath-007556	Arabidopsis thaliana	37.06	3.00e-66	245.00
IUUC-Ago-007851	Ashbya gossypii	35.68	3.00e-66	245.00
IUUC-Acl-008100	Aspergillus clavatus	36.50	1.00e-64	240.00
IUUC-Afl-008649	Aspergillus flavus	40.32	7.00e-12	61.20
IUUC-Afu-009066	Aspergillus fumigatus	36.01	1.00e-66	246.00
IUUC-Ani-009372	Aspergillus nidulans	36.80	7.00e-66	244.00
IUUC-Ang-009726	Aspergillus niger	36.50	9.00e-71	260.00
IUUC-Aor-010135	Aspergillus oryzae	35.73	1.00e-63	236.00
IUUC-Ate-010399	Aspergillus terreus	38.31	5.00e-25	107.00
IUUC-Ame-011618	Astyanax mexicanus	69.60	5.00e-166	577.00
IUUC-Bgr-012154	Blumeria graminis	34.22	3.00e-63	235.00
IUUC-Bta-012353	Bos taurus	72.22	4.00e-168	583.00
IUUC-Bci-013932	Botrytis cinerea	34.62	8.00e-68	250.00
IUUC-Bdi-014391	Brachypodium distachyon	36.18	8.00e-67	247.00
IUUC-Bol-015128	Brassica oleracea	36.57	2.00e-67	249.00
IUUC-Bra-017932	Brassica rapa	36.57	2.00e-67	249.00
IUUC-Cel-018649	Caenorhabditis elegans	38.04	1.00e-70	259.00
IUUC-Cja-018776	Callithrix jacchus	72.86	1.00e-168	585.00
IUUC-Cfa-020584	Canis familiaris	72.54	3.00e-167	581.00
IUUC-Cpo-021300	Cavia porcellus	72.11	2.00e-168	584.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	40.52	4.00e-65	241.00
IUUC-Csa-024092	Chlorocebus sabaeus	73.12	2.00e-169	588.00
IUUC-Cho-024919	Choloepus hoffmanni	59.73	1.00e-68	251.00
IUUC-Cin-025386	Ciona intestinalis	48.88	3.00e-95	341.00
IUUC-Csv-026295	Ciona savignyi	46.75	8.00e-96	343.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	33.25	1.00e-60	227.00
IUUC-Cne-026956	Cryptococcus neoformans	34.63	1.00e-71	263.00
IUUC-Cme-027150	Cyanidioschyzon merolae	29.65	2.00e-39	156.00
IUUC-Dre-027962	Danio rerio	69.72	9.00e-166	575.00
IUUC-Dno-029979	Dasypus novemcinctus	70.62	4.00e-137	480.00
IUUC-Dse-031405	Dothistroma septosporum	33.02	3.00e-57	216.00
IUUC-Dme-031710	Drosophila melanogaster	47.04	2.00e-93	335.00
IUUC-Ete-032631	Echinops telfairi	72.86	2.00e-167	581.00
IUUC-Eca-034054	Equus caballus	71.68	2.00e-165	574.00
IUUC-Fca-035724	Felis catus	67.76	2.00e-154	538.00
IUUC-Fal-036987	Ficedula albicollis	73.43	4.00e-178	617.00
IUUC-Fox-037692	Fusarium oxysporum	33.98	6.00e-60	224.00
IUUC-Fso-038442	Fusarium solani	34.62	5.00e-59	221.00
IUUC-Gmo-039273	Gadus morhua	69.19	7.00e-162	563.00
IUUC-Ggr-040009	Gaeumannomyces graminis	31.62	1.00e-45	177.00
IUUC-Gga-041089	Gallus gallus	73.43	8.00e-179	619.00
IUUC-Gac-041978	Gasterosteus aculeatus	66.83	9.00e-150	522.00
IUUC-Gma-043371	Glycine max	37.19	1.00e-73	269.00
IUUC-Hsa-046001	Homo sapiens	73.37	8.00e-170	589.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	73.12	8.00e-177	612.00
IUUC-Kpa-049235	Komagataella pastoris	34.99	2.00e-62	233.00
IUUC-Lch-049926	Latimeria chalumnae	73.68	3.00e-173	600.00
IUUC-Lpe-051352	Leersia perrieri	36.00	3.00e-64	239.00
IUUC-Loc-051987	Lepisosteus oculatus	71.28	1.00e-170	592.00
IUUC-Lma-053171	Leptosphaeria maculans	31.52	3.00e-53	202.00
IUUC-Laf-054372	Loxodonta africana	73.37	3.00e-171	593.00
IUUC-Mcc-055108	Macaca mulatta	73.37	7.00e-170	589.00
IUUC-Mor-056990	Magnaporthe oryzae	31.47	2.00e-59	223.00
IUUC-Mtr-058401	Medicago truncatula	36.63	6.00e-72	264.00
IUUC-Mla-059186	Melampsora laricipopulina	37.47	3.00e-72	265.00
IUUC-Mvi-060262	Microbotryum violaceum	35.05	6.00e-71	261.00
IUUC-Mmr-061688	Microcebus murinus	72.36	6.00e-165	573.00
IUUC-Mdo-062154	Monodelphis domestica	75.19	0.00e+00	625.00
IUUC-Mmu-064232	Mus musculus	73.18	4.00e-169	587.00
IUUC-Mac-065091	Musa acuminata	36.92	1.00e-68	253.00
IUUC-Mpu-066747	Mustela putorius furo	66.50	8.00e-148	516.00
IUUC-Mlu-067799	Myotis lucifugus	67.09	2.00e-149	521.00
IUUC-Nfi-068371	Neosartorya fischeri	31.17	1.00e-17	82.40
IUUC-Ncr-068704	Neurospora crassa	33.79	8.00e-59	221.00
IUUC-Nle-069054	Nomascus leucogenys	73.05	4.00e-169	587.00
IUUC-Ont-071624	Oreochromis niloticus	67.84	3.00e-156	544.00
IUUC-Oan-072898	Ornithorhynchus anatinus	74.94	8.00e-178	615.00
IUUC-Ocu-074289	Oryctolagus cuniculus	72.29	9.00e-134	469.00
IUUC-Oba-075985	Oryza barthii	35.31	3.00e-63	235.00
IUUC-Obr-076887	Oryza brachyantha	35.28	2.00e-65	242.00
IUUC-Ogl-077823	Oryza glaberrima	35.31	3.00e-63	235.00
IUUC-Ogu-078412	Oryza glumaepatula	35.69	5.00e-56	211.00
IUUC-Oin-079569	Oryza indica	37.73	4.00e-41	162.00
IUUC-Olo-080249	Oryza longistaminata	37.27	2.00e-40	159.00
IUUC-Ome-081240	Oryza meridionalis	35.69	7.00e-56	211.00
IUUC-Oni-082152	Oryza nivara	35.69	4.00e-56	211.00
IUUC-Opu-084011	Oryza punctata	35.06	9.00e-63	234.00
IUUC-Oru-084719	Oryza rufipogon	35.22	6.00e-57	214.00
IUUC-Osa-085286	Oryza sativa	35.56	2.00e-64	239.00
IUUC-Ola-086525	Oryzias latipes	59.40	8.00e-133	466.00
IUUC-Olu-087876	Ostreococcus lucimarinus	40.10	2.00e-61	229.00
IUUC-Oga-088125	Otolemur garnettii	72.36	9.00e-169	585.00
IUUC-Oar-089701	Ovis aries	72.11	1.00e-168	585.00
IUUC-Ptr-091218	Pan troglodytes	73.37	9.00e-170	589.00
IUUC-Pan-091755	Papio anubis	73.37	7.00e-170	589.00
IUUC-Psi-094061	Pelodiscus sinensis	75.13	8.00e-179	619.00
IUUC-Pma-094430	Petromyzon marinus	71.93	3.00e-99	354.00
IUUC-Pno-094900	Phaeosphaeria nodorum	36.88	4.00e-20	93.20
IUUC-Ppa-095895	Physcomitrella patens	38.30	3.00e-70	258.00
IUUC-Pfo-096297	Poecilia formosa	75.88	1.00e-105	375.00
IUUC-Pab-097717	Pongo abelii	73.37	7.00e-170	589.00
IUUC-Pop-098938	Populus trichocarpa	37.76	8.00e-72	263.00
IUUC-Pca-100389	Procavia capensis	64.87	2.00e-125	442.00
IUUC-Ppe-102045	Prunus persica	37.47	3.00e-71	262.00
IUUC-Pva-102357	Pteropus vampyrus	63.33	3.00e-65	240.00
IUUC-Pgr-103399	Puccinia graminis	38.80	9.00e-80	290.00
IUUC-Ptt-103872	Puccinia triticina	38.76	2.00e-79	289.00
IUUC-Pte-104092	Pyrenophora teres	33.06	4.00e-48	185.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	33.33	2.00e-48	186.00
IUUC-Rno-105515	Rattus norvegicus	72.61	3.00e-168	583.00
IUUC-Sce-106434	Saccharomyces cerevisiae	36.34	5.00e-67	248.00
IUUC-Sha-106808	Sarcophilus harrisii	74.44	1.00e-178	618.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	37.47	2.00e-71	262.00
IUUC-Spo-108044	Schizosaccharomyces pombe	33.92	4.00e-66	244.00
IUUC-Smo-109581	Selaginella moellendorffii	39.30	3.00e-71	262.00
IUUC-Sit-110704	Setaria italica	36.41	8.00e-67	247.00
IUUC-Sly-110990	Solanum lycopersicum	40.26	7.00e-58	217.00
IUUC-Stu-112542	Solanum tuberosum	40.74	3.00e-43	167.00
IUUC-Sar-113766	Sorex araneus	71.12	2.00e-135	474.00
IUUC-Sbi-114016	Sorghum bicolor	36.16	3.00e-64	238.00
IUUC-Sre-115099	Sporisorium reilianum	37.02	3.00e-72	265.00
IUUC-Ssc-115277	Sus scrofa	73.37	4.00e-166	577.00
IUUC-Tgu-117343	Taeniopygia guttata	73.12	3.00e-176	610.00
IUUC-Tru-118397	Takifugu rubripes	65.08	2.00e-147	514.00
IUUC-Tni-120272	Tetraodon nigroviridis	64.11	1.00e-146	512.00
IUUC-Tca-121514	Theobroma cacao	38.10	4.00e-74	271.00
IUUC-Tre-121990	Trichoderma reesei	33.02	2.00e-56	212.00
IUUC-Tvi-122504	Trichoderma virens	35.33	3.00e-55	208.00
IUUC-Tae-123153	Triticum aestivum	35.75	6.00e-67	248.00
IUUC-Tur-126693	Triticum urartu	38.52	1.00e-48	186.00
IUUC-Tme-127011	Tuber melanosporum	35.34	2.00e-63	236.00
IUUC-Tbe-127939	Tupaia belangeri	73.62	8.00e-170	589.00
IUUC-Ttr-128889	Tursiops truncatus	65.33	2.00e-152	531.00
IUUC-Uma-129450	Ustilago maydis	35.42	3.00e-71	262.00
IUUC-Vda-129919	Verticillium dahliae	33.17	5.00e-54	204.00
IUUC-Vvi-130928	Vitis vinifera	39.60	1.00e-75	276.00
IUUC-Xma-133260	Xiphophorus maculatus	75.00	9.00e-105	372.00
IUUC-Yli-134578	Yarrowia lipolytica	36.57	6.00e-70	258.00
IUUC-Zma-135427	Zea mays	36.16	8.00e-65	240.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence