iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126610

Ensembl Protein ID

TRIUR3_14094-P1

UniProt Accession

M7YSY2; M7YSY2_TRIUA

Genbank Protein ID

EMS50196.1

Protein Name

Putative DNA repair protein RAD23

Genbank Nucleotide ID

KD234111

Gene Name

TRIUR3_14094

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_14094	TRIUR3_14094-T1	TRIUR3_14094-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.30e-19	68.4	165	205
ULD/UDP/UBQ/UBQ_PIM	3.20e-23	82.2	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           e  ++ + eMG   +dr+++l+aLraa+nn+e+AveyL++g
   Q: 165  EATIQSILEMGggtWDRDTVLRALRAAFNNPERAVEYLYSG 205
           6789**********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk+ vktlkg++fe+ev++ d+v+++K++i++++g   +p++qq LIy+G +LkD+ttL+e+++ ++++++++++++k
   Q: 1    MKVSVKTLKGSKFEIEVNPADKVSDVKKLIETSQGqnvYPADQQMLIYQGSVLKDETTLEENKVVENNFLVIMLRQNK 78
           99*************************************************************************987 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MKVSVKTLKG SKFEIEVNPA DKVSDVKKLI ETSQGQNVYP ADQQMLIYQG SVLKDETTLE 60
ENKVVENNFL VIMLRQNKGS SSAAPAKSKE PSNQAPPTQT VPATPASQAP ATPAPQAVAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGTCT CCGTGAAGAC GCTCAAGGGC TCCAAATTCG AGATCGAAGT GAACCCCGCC 60
GACAAGGTAC GGCCGCTCCC GCCCCGCCTC CCGATCTGTC TGTCTGCCGC CGCGAGGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	98.72	1.00e-157	548.00
IUUC-Aml-001515	Ailuropoda melanoleuca	38.11	1.00e-29	122.00
IUUC-Atr-003116	Amborella trichopoda	67.98	1.00e-79	288.00
IUUC-Apl-003371	Anas platyrhynchos	36.82	9.00e-28	116.00
IUUC-Aca-004704	Anolis carolinensis	33.68	5.00e-32	130.00
IUUC-Aly-005498	Arabidopsis lyrata	65.34	2.00e-81	295.00
IUUC-Ath-006688	Arabidopsis thaliana	65.60	1.00e-80	292.00
IUUC-Acl-008212	Aspergillus clavatus	37.45	8.00e-27	113.00
IUUC-Afl-008605	Aspergillus flavus	41.34	1.00e-29	123.00
IUUC-Afu-008877	Aspergillus fumigatus	38.10	1.00e-27	116.00
IUUC-Ani-009460	Aspergillus nidulans	40.16	3.00e-28	118.00
IUUC-Aor-010032	Aspergillus oryzae	41.34	1.00e-29	122.00
IUUC-Ate-010458	Aspergillus terreus	38.98	3.00e-28	118.00
IUUC-Ame-011107	Astyanax mexicanus	46.94	9.00e-15	73.60
IUUC-Bgr-012056	Blumeria graminis	47.37	2.00e-16	79.30
IUUC-Bta-012922	Bos taurus	36.11	2.00e-28	119.00
IUUC-Bci-013933	Botrytis cinerea	31.76	3.00e-32	131.00
IUUC-Bdi-014253	Brachypodium distachyon	93.92	2.00e-166	577.00
IUUC-Bol-016493	Brassica oleracea	66.40	5.00e-85	306.00
IUUC-Bra-017582	Brassica rapa	66.40	1.00e-84	305.00
IUUC-Cel-018364	Caenorhabditis elegans	30.87	6.00e-12	63.90
IUUC-Cja-018946	Callithrix jacchus	38.52	5.00e-30	124.00
IUUC-Cpo-021850	Cavia porcellus	34.41	1.00e-42	166.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.43	3.00e-16	78.60
IUUC-Csa-023183	Chlorocebus sabaeus	38.87	4.00e-30	124.00
IUUC-Cin-025741	Ciona intestinalis	26.11	2.00e-17	82.40
IUUC-Cgl-026495	Colletotrichum gloeosporioides	45.10	5.00e-16	77.40
IUUC-Cne-027056	Cryptococcus neoformans	57.14	1.00e-10	60.10
IUUC-Cme-027260	Cyanidioschyzon merolae	26.34	2.00e-22	99.00
IUUC-Dre-028369	Danio rerio	38.06	6.00e-34	137.00
IUUC-Dno-030017	Dasypus novemcinctus	37.70	2.00e-28	118.00
IUUC-Dor-030358	Dipodomys ordii	39.75	1.00e-31	129.00
IUUC-Dse-031336	Dothistroma septosporum	45.31	7.00e-19	87.40
IUUC-Dme-032027	Drosophila melanogaster	27.89	3.00e-36	144.00
IUUC-Eca-034243	Equus caballus	36.11	3.00e-28	118.00
IUUC-Eeu-034721	Erinaceus europaeus	32.90	1.00e-16	79.70
IUUC-Fca-035679	Felis catus	36.51	1.00e-27	116.00
IUUC-Fox-037960	Fusarium oxysporum	49.59	3.00e-20	91.70
IUUC-Fso-038107	Fusarium solani	44.62	1.00e-18	86.70
IUUC-Gmo-039080	Gadus morhua	38.63	4.00e-25	107.00
IUUC-Ggr-040116	Gaeumannomyces graminis	47.83	4.00e-21	94.40
IUUC-Gac-042298	Gasterosteus aculeatus	32.89	1.00e-35	142.00
IUUC-Gma-043937	Glycine max	65.06	5.00e-89	320.00
IUUC-Ggo-045084	Gorilla gorilla	38.52	4.00e-30	124.00
IUUC-Hsa-046614	Homo sapiens	38.87	5.00e-30	124.00
IUUC-Hvu-047832	Hordeum vulgare	97.99	3.00e-126	443.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	33.42	8.00e-42	163.00
IUUC-Kpa-049314	Komagataella pastoris	36.14	3.00e-27	114.00
IUUC-Lch-050553	Latimeria chalumnae	45.71	1.00e-14	73.20
IUUC-Lpe-051087	Leersia perrieri	82.07	5.00e-112	396.00
IUUC-Loc-051748	Lepisosteus oculatus	37.34	4.00e-29	121.00
IUUC-Laf-054293	Loxodonta africana	36.76	3.00e-26	111.00
IUUC-Mcc-055860	Macaca mulatta	38.87	4.00e-30	124.00
IUUC-Meu-056459	Macropus eugenii	39.34	4.00e-31	127.00
IUUC-Mor-057287	Magnaporthe oryzae	52.54	3.00e-18	85.10
IUUC-Mpo-057609	Magnaporthe poae	48.09	1.00e-20	92.80
IUUC-Mla-058961	Melampsora laricipopulina	42.75	4.00e-23	101.00
IUUC-Mmr-061159	Microcebus murinus	35.77	1.00e-26	113.00
IUUC-Mdo-062742	Monodelphis domestica	32.99	1.00e-44	172.00
IUUC-Mmu-063929	Mus musculus	32.66	2.00e-40	158.00
IUUC-Mac-065180	Musa acuminata	65.57	2.00e-117	414.00
IUUC-Mlu-067787	Myotis lucifugus	32.49	4.00e-39	154.00
IUUC-Nfi-068390	Neosartorya fischeri	38.49	1.00e-27	115.00
IUUC-Ncr-068685	Neurospora crassa	39.23	5.00e-31	127.00
IUUC-Nle-069655	Nomascus leucogenys	36.29	7.00e-27	114.00
IUUC-Ont-072484	Oreochromis niloticus	36.98	1.00e-30	126.00
IUUC-Oan-073572	Ornithorhynchus anatinus	30.94	8.00e-32	130.00
IUUC-Ocu-073793	Oryctolagus cuniculus	31.91	9.00e-25	106.00
IUUC-Oba-075392	Oryza barthii	80.08	4.00e-109	387.00
IUUC-Ogl-077021	Oryza glaberrima	68.73	5.00e-130	456.00
IUUC-Ogu-078883	Oryza glumaepatula	80.08	2.00e-109	387.00
IUUC-Oin-079817	Oryza indica	79.68	1.00e-108	385.00
IUUC-Olo-080929	Oryza longistaminata	79.68	1.00e-108	385.00
IUUC-Ome-081866	Oryza meridionalis	80.08	3.00e-109	387.00
IUUC-Oni-083092	Oryza nivara	79.68	1.00e-108	385.00
IUUC-Opu-083756	Oryza punctata	82.26	7.00e-111	392.00
IUUC-Oru-084816	Oryza rufipogon	79.68	1.00e-108	385.00
IUUC-Osa-086112	Oryza sativa	79.68	1.00e-108	385.00
IUUC-Ola-086540	Oryzias latipes	32.71	2.00e-25	109.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.68	2.00e-41	162.00
IUUC-Oga-088023	Otolemur garnettii	35.80	1.00e-26	113.00
IUUC-Oar-089964	Ovis aries	36.90	5.00e-28	117.00
IUUC-Ptr-090912	Pan troglodytes	38.87	6.00e-30	124.00
IUUC-Pan-092140	Papio anubis	38.52	4.00e-30	124.00
IUUC-Pno-095064	Phaeosphaeria nodorum	34.00	3.00e-12	65.50
IUUC-Ppa-095964	Physcomitrella patens	60.80	3.00e-67	247.00
IUUC-Pfo-096607	Poecilia formosa	32.76	3.00e-38	151.00
IUUC-Pab-097738	Pongo abelii	38.87	6.00e-30	124.00
IUUC-Pop-099642	Populus trichocarpa	66.53	1.00e-83	302.00
IUUC-Pca-100348	Procavia capensis	38.52	7.00e-30	123.00
IUUC-Ppe-101830	Prunus persica	57.93	1.00e-99	355.00
IUUC-Pva-102412	Pteropus vampyrus	38.87	4.00e-30	124.00
IUUC-Pgr-103641	Puccinia graminis	35.04	5.00e-23	101.00
IUUC-Ptt-103717	Puccinia triticina	38.72	2.00e-32	132.00
IUUC-Pte-104303	Pyrenophora teres	37.93	5.00e-21	94.40
IUUC-Pyt-104580	Pyrenophora triticirepentis	37.55	2.00e-20	92.40
IUUC-Rno-105569	Rattus norvegicus	38.11	6.00e-30	124.00
IUUC-Sce-106214	Saccharomyces cerevisiae	33.82	3.00e-12	65.10
IUUC-Sha-106918	Sarcophilus harrisii	32.73	5.00e-36	144.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.96	2.00e-33	135.00
IUUC-Smo-109129	Selaginella moellendorffii	54.37	2.00e-58	218.00
IUUC-Sit-110235	Setaria italica	61.45	4.00e-70	257.00
IUUC-Sly-111480	Solanum lycopersicum	61.13	2.00e-120	424.00
IUUC-Stu-112027	Solanum tuberosum	59.85	1.00e-120	425.00
IUUC-Sar-112925	Sorex araneus	35.95	2.00e-23	102.00
IUUC-Sbi-113871	Sorghum bicolor	70.41	4.00e-117	413.00
IUUC-Sre-114894	Sporisorium reilianum	64.44	7.00e-12	64.30
IUUC-Ssc-116329	Sus scrofa	36.11	2.00e-28	119.00
IUUC-Tru-117920	Takifugu rubripes	40.52	2.00e-37	148.00
IUUC-Tni-120493	Tetraodon nigroviridis	39.66	2.00e-37	148.00
IUUC-Tre-121911	Trichoderma reesei	40.00	8.00e-28	116.00
IUUC-Tvi-122617	Trichoderma virens	40.50	3.00e-27	115.00
IUUC-Tae-125354	Triticum aestivum	99.49	4.00e-164	569.00
IUUC-Tme-127092	Tuber melanosporum	48.55	9.00e-23	100.00
IUUC-Ttr-129232	Tursiops truncatus	38.52	6.00e-30	123.00
IUUC-Uma-129484	Ustilago maydis	59.62	2.00e-13	68.90
IUUC-Vda-129946	Verticillium dahliae	48.55	4.00e-22	98.20
IUUC-Vvi-130842	Vitis vinifera	66.53	4.00e-88	317.00
IUUC-Xtr-132679	Xenopus tropicalis	37.97	4.00e-13	68.20
IUUC-Xma-133503	Xiphophorus maculatus	35.55	2.00e-33	135.00
IUUC-Yli-134615	Yarrowia lipolytica	37.72	9.00e-30	123.00
IUUC-Zma-135678	Zea mays	76.23	1.00e-97	348.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence