iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074811

Ensembl Protein ID

ENSOCUP00000014856.3

UniProt Accession

G1TDE1; G1TDE1_RABIT

Genbank Protein ID

ENSOCUP00000014856

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02022404

Gene Name

SMARCAD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000017283.3	ENSOCUT00000017291.3	ENSOCUP00000014856.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	44.84	9.00e-125	442.00	IUUC-Sce-106399

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MNLFNLDRFR FEKRSKIEEA PEATPQPSQP GPSSPISLSA EEENAEGEVS RANTPDSDVT 60
EKTEDSSVPE TPDNERKTSI SYFKNQRGIQ YIDLSSDSED IVSPNCSNTV QEKKFNKDTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTTATTTT TATTGTTCTG TATAACACCT TTGCACCTAA CTTGTAGAAA CAGTTGTAGA 60
AACAAACGGG CAGAACAATC CCACCCTTAA AAGCCGGGGA AGAGGCTGGT ACGAATTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003892--CUE
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N

PROSITE

PS51140--CUE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0000792--C:heterochromatin
GO:0043596--C:nuclear replication fork
GO:0005654--C:nucleoplasm
GO:0035861--C:site of double-strand break
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0051304--P:chromosome separation
GO:0000729--P:DNA double-strand break processing
GO:0070932--P:histone H3 deacetylation
GO:0070933--P:histone H4 deacetylation
GO:0000018--P:regulation of DNA recombination

KEGG

ocu:100354709

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000567	Aegilops tauschii	38.30	7.00e-100	358.00
IUUC-Aml-002063	Ailuropoda melanoleuca	96.30	0.00e+00	1895.00
IUUC-Atr-003078	Amborella trichopoda	34.76	7.00e-104	371.00
IUUC-Apl-003860	Anas platyrhynchos	71.93	0.00e+00	1379.00
IUUC-Aca-004485	Anolis carolinensis	69.86	0.00e+00	1395.00
IUUC-Aly-006561	Arabidopsis lyrata	38.97	3.00e-105	375.00
IUUC-Ath-006832	Arabidopsis thaliana	39.32	2.00e-106	380.00
IUUC-Ago-007758	Ashbya gossypii	45.68	3.00e-134	473.00
IUUC-Acl-008226	Aspergillus clavatus	44.71	2.00e-134	473.00
IUUC-Afl-008556	Aspergillus flavus	45.79	1.00e-131	464.00
IUUC-Afu-008799	Aspergillus fumigatus	44.53	5.00e-134	472.00
IUUC-Ani-009127	Aspergillus nidulans	45.57	2.00e-131	463.00
IUUC-Ang-009676	Aspergillus niger	44.57	2.00e-133	470.00
IUUC-Aor-010184	Aspergillus oryzae	45.08	6.00e-133	468.00
IUUC-Ate-010559	Aspergillus terreus	37.46	2.00e-131	463.00
IUUC-Ame-011933	Astyanax mexicanus	59.97	0.00e+00	884.00
IUUC-Bta-012963	Bos taurus	93.29	0.00e+00	1854.00
IUUC-Bci-013670	Botrytis cinerea	41.44	1.00e-118	421.00
IUUC-Bdi-014286	Brachypodium distachyon	37.84	4.00e-102	365.00
IUUC-Bol-016519	Brassica oleracea	39.58	2.00e-107	383.00
IUUC-Bra-017239	Brassica rapa	39.40	2.00e-106	380.00
IUUC-Cel-018253	Caenorhabditis elegans	43.64	3.00e-139	489.00
IUUC-Cja-019465	Callithrix jacchus	95.13	0.00e+00	1899.00
IUUC-Cfa-020637	Canis familiaris	93.87	0.00e+00	1896.00
IUUC-Cpo-021822	Cavia porcellus	95.02	0.00e+00	1787.00
IUUC-Csa-023315	Chlorocebus sabaeus	97.62	0.00e+00	1648.00
IUUC-Cin-025444	Ciona intestinalis	49.92	2.00e-176	612.00
IUUC-Cgl-026383	Colletotrichum gloeosporioides	40.41	4.00e-107	382.00
IUUC-Cne-027090	Cryptococcus neoformans	36.08	2.00e-114	407.00
IUUC-Dre-028385	Danio rerio	58.52	0.00e+00	858.00
IUUC-Dno-028932	Dasypus novemcinctus	96.00	0.00e+00	1946.00
IUUC-Dse-031394	Dothistroma septosporum	36.75	7.00e-104	372.00
IUUC-Dme-031640	Drosophila melanogaster	45.69	3.00e-157	548.00
IUUC-Eca-033276	Equus caballus	96.11	0.00e+00	1960.00
IUUC-Fca-035936	Felis catus	92.99	0.00e+00	1865.00
IUUC-Fal-037636	Ficedula albicollis	66.89	0.00e+00	1326.00
IUUC-Fso-038229	Fusarium solani	35.40	2.00e-110	393.00
IUUC-Gmo-039654	Gadus morhua	56.88	0.00e+00	894.00
IUUC-Ggr-039922	Gaeumannomyces graminis	33.14	1.00e-93	338.00
IUUC-Gga-040646	Gallus gallus	66.54	0.00e+00	1379.00
IUUC-Gac-042320	Gasterosteus aculeatus	66.04	0.00e+00	802.00
IUUC-Gma-042832	Glycine max	39.60	5.00e-107	382.00
IUUC-Ggo-044875	Gorilla gorilla	87.73	0.00e+00	1768.00
IUUC-Hsa-046992	Homo sapiens	95.72	0.00e+00	1932.00
IUUC-Hvu-047408	Hordeum vulgare	37.66	3.00e-102	366.00
IUUC-Itr-047881	Ictidomys tridecemlineatus	98.55	0.00e+00	1109.00
IUUC-Kpa-049212	Komagataella pastoris	43.03	3.00e-127	449.00
IUUC-Lpe-050987	Leersia perrieri	35.35	9.00e-102	364.00
IUUC-Loc-052272	Lepisosteus oculatus	53.46	0.00e+00	1009.00
IUUC-Lma-053118	Leptosphaeria maculans	42.37	3.00e-121	430.00
IUUC-Laf-053436	Loxodonta africana	93.96	0.00e+00	1860.00
IUUC-Mcc-055209	Macaca mulatta	97.47	0.00e+00	1702.00
IUUC-Mor-056994	Magnaporthe oryzae	34.51	2.00e-95	343.00
IUUC-Mpo-057305	Magnaporthe poae	33.71	1.00e-98	354.00
IUUC-Mtr-058432	Medicago truncatula	39.23	6.00e-105	375.00
IUUC-Mla-058972	Melampsora laricipopulina	38.69	1.00e-122	433.00
IUUC-Mga-059572	Meleagris gallopavo	64.98	0.00e+00	1235.00
IUUC-Mvi-060209	Microbotryum violaceum	40.23	5.00e-140	492.00
IUUC-Mmr-061416	Microcebus murinus	92.79	0.00e+00	1120.00
IUUC-Mdo-062869	Monodelphis domestica	81.55	0.00e+00	1635.00
IUUC-Mmu-064272	Mus musculus	91.91	0.00e+00	1684.00
IUUC-Mac-064963	Musa acuminata	34.57	6.00e-95	342.00
IUUC-Mpu-065755	Mustela putorius furo	96.50	0.00e+00	1933.00
IUUC-Mlu-067604	Myotis lucifugus	92.90	0.00e+00	1860.00
IUUC-Nfi-068310	Neosartorya fischeri	44.34	2.00e-133	470.00
IUUC-Ncr-068841	Neurospora crassa	34.23	1.00e-110	394.00
IUUC-Nle-069227	Nomascus leucogenys	95.82	0.00e+00	1934.00
IUUC-Opr-071088	Ochotona princeps	88.17	0.00e+00	1368.00
IUUC-Ont-072291	Oreochromis niloticus	65.99	0.00e+00	823.00
IUUC-Oan-073460	Ornithorhynchus anatinus	84.30	0.00e+00	1368.00
IUUC-Oba-075463	Oryza barthii	38.08	8.00e-101	360.00
IUUC-Obr-076342	Oryza brachyantha	37.89	1.00e-103	370.00
IUUC-Ogu-078837	Oryza glumaepatula	38.08	4.00e-101	362.00
IUUC-Oin-079623	Oryza indica	38.08	2.00e-101	363.00
IUUC-Ome-081105	Oryza meridionalis	38.08	2.00e-101	363.00
IUUC-Oni-082598	Oryza nivara	38.08	4.00e-101	362.00
IUUC-Opu-084040	Oryza punctata	38.26	3.00e-101	362.00
IUUC-Oru-084219	Oryza rufipogon	38.08	2.00e-101	363.00
IUUC-Osa-085461	Oryza sativa	38.08	2.00e-101	363.00
IUUC-Ola-087307	Oryzias latipes	66.61	0.00e+00	794.00
IUUC-Olu-087812	Ostreococcus lucimarinus	39.29	4.00e-100	358.00
IUUC-Oga-089064	Otolemur garnettii	93.88	0.00e+00	1891.00
IUUC-Oar-090054	Ovis aries	95.91	0.00e+00	1890.00
IUUC-Ptr-091228	Pan troglodytes	96.00	0.00e+00	1939.00
IUUC-Pan-092769	Papio anubis	95.40	0.00e+00	1803.00
IUUC-Psi-093202	Pelodiscus sinensis	72.39	0.00e+00	1410.00
IUUC-Pma-094725	Petromyzon marinus	46.75	0.00e+00	878.00
IUUC-Pno-095130	Phaeosphaeria nodorum	41.55	4.00e-110	392.00
IUUC-Ppa-095559	Physcomitrella patens	40.59	7.00e-109	388.00
IUUC-Pfo-096546	Poecilia formosa	66.46	0.00e+00	834.00
IUUC-Pab-097698	Pongo abelii	96.69	0.00e+00	1931.00
IUUC-Pop-099986	Populus trichocarpa	39.36	3.00e-106	379.00
IUUC-Ppe-101649	Prunus persica	39.27	9.00e-104	371.00
IUUC-Pva-102138	Pteropus vampyrus	93.39	0.00e+00	1867.00
IUUC-Pgr-103272	Puccinia graminis	35.21	5.00e-120	425.00
IUUC-Ptt-103880	Puccinia triticina	36.09	2.00e-129	457.00
IUUC-Pte-104260	Pyrenophora teres	42.83	5.00e-118	419.00
IUUC-Pyt-104532	Pyrenophora triticirepentis	34.29	1.00e-79	291.00
IUUC-Rno-105903	Rattus norvegicus	93.37	0.00e+00	1740.00
IUUC-Sce-106399	Saccharomyces cerevisiae	44.84	1.00e-126	447.00
IUUC-Sha-106783	Sarcophilus harrisii	80.06	0.00e+00	1560.00
IUUC-Sja-107887	Schizosaccharomyces japonicus	40.86	1.00e-142	501.00
IUUC-Spo-108154	Schizosaccharomyces pombe	42.60	1.00e-148	521.00
IUUC-Smo-108759	Selaginella moellendorffii	40.33	9.00e-106	377.00
IUUC-Sit-110023	Setaria italica	36.97	4.00e-101	362.00
IUUC-Sly-111423	Solanum lycopersicum	39.28	1.00e-105	377.00
IUUC-Sbi-114688	Sorghum bicolor	37.55	3.00e-102	366.00
IUUC-Sre-114983	Sporisorium reilianum	35.61	3.00e-111	396.00
IUUC-Ssc-116030	Sus scrofa	93.88	0.00e+00	1900.00
IUUC-Tgu-117451	Taeniopygia guttata	77.81	0.00e+00	1202.00
IUUC-Tru-118600	Takifugu rubripes	65.99	0.00e+00	792.00
IUUC-Tsy-119130	Tarsius syrichta	85.92	0.00e+00	1596.00
IUUC-Tni-119758	Tetraodon nigroviridis	56.68	0.00e+00	875.00
IUUC-Tca-121797	Theobroma cacao	39.82	4.00e-107	382.00
IUUC-Tre-121883	Trichoderma reesei	40.37	2.00e-102	367.00
IUUC-Tvi-122333	Trichoderma virens	40.15	2.00e-110	393.00
IUUC-Tae-122848	Triticum aestivum	38.30	4.00e-100	358.00
IUUC-Tur-126594	Triticum urartu	38.30	1.00e-99	357.00
IUUC-Tme-127106	Tuber melanosporum	42.34	3.00e-124	439.00
IUUC-Tbe-127911	Tupaia belangeri	97.42	0.00e+00	994.00
IUUC-Ttr-128597	Tursiops truncatus	94.74	0.00e+00	1834.00
IUUC-Uma-129321	Ustilago maydis	36.32	2.00e-112	400.00
IUUC-Vpa-130686	Vicugna pacos	88.05	0.00e+00	1668.00
IUUC-Vvi-131046	Vitis vinifera	39.19	3.00e-106	379.00
IUUC-Xtr-132740	Xenopus tropicalis	65.30	0.00e+00	1139.00
IUUC-Xma-134260	Xiphophorus maculatus	56.21	0.00e+00	888.00
IUUC-Yli-134634	Yarrowia lipolytica	40.70	6.00e-139	488.00
IUUC-Zma-135493	Zea mays	36.50	3.00e-101	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence