iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000011317.3	ENSSSCT00000035018.1	ENSSSCP00000028448.1
ENSSSCG00000011317.3	ENSSSCT00000012390.2	ENSSSCP00000012066.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	44.00	4.00e-11	65.90	IUUC-Sce-106309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MSASKLASDK LRSTLLGAAL KPWQGSLPVH GLLQCRAPGL QAFKAAATTV SLNHFSSCPR 60
SASNSGLNSH EAHSQERRPR PVTVTMASSS VESQLQRIIR DLQDAVTELS REFKDAGEPI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCTT CCAAGCTGGC CTCTGACAAG CTCCGGAGCA CTCTCCTAGG TGCTGCATTG 60
AAGCCCTGGC AGGGCAGCCT GCCTGTCCAC GGACTGCTTC AGTGCCGAGC CCCTGGACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004012--Run_dom
IPR000306--Znf_FYVE
IPR017455--Znf_FYVE-rel
IPR011011--Znf_FYVE_PHD
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50826--RUN
PS50178--ZF_FYVE

Pfam

PF01363--FYVE
PF02759--RUN

SMART

SM00064--FYVE

Gene Ontology

GO:0005776--C:autophagosome
GO:0005794--C:Golgi apparatus
GO:0005770--C:late endosome
GO:0005764--C:lysosome
GO:0016020--C:membrane
GO:0046872--F:metal ion binding
GO:0044183--F:protein binding involved in protein folding
GO:0051082--F:unfolded protein binding
GO:0006458--P:'de novo' protein folding
GO:0061077--P:chaperone-mediated protein folding
GO:0072383--P:plus-end-directed vesicle transport along microtubule
GO:1901098--P:positive regulation of autophagosome maturation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001622	Ailuropoda melanoleuca	72.99	0.00e+00	1590.00
IUUC-Apl-004173	Anas platyrhynchos	39.30	3.00e-156	545.00
IUUC-Ame-010798	Astyanax mexicanus	46.33	6.00e-50	191.00
IUUC-Bta-012394	Bos taurus	76.68	0.00e+00	1626.00
IUUC-Cja-019711	Callithrix jacchus	78.97	0.00e+00	1736.00
IUUC-Cfa-020392	Canis familiaris	74.91	0.00e+00	1625.00
IUUC-Cpo-021456	Cavia porcellus	68.59	0.00e+00	1521.00
IUUC-Csa-023192	Chlorocebus sabaeus	79.64	0.00e+00	1735.00
IUUC-Dre-027779	Danio rerio	41.56	5.00e-108	386.00
IUUC-Dno-029277	Dasypus novemcinctus	69.25	0.00e+00	1370.00
IUUC-Eca-033806	Equus caballus	81.02	0.00e+00	1784.00
IUUC-Fca-035563	Felis catus	67.89	0.00e+00	803.00
IUUC-Fal-036657	Ficedula albicollis	48.21	0.00e+00	1069.00
IUUC-Gmo-038911	Gadus morhua	31.42	1.00e-98	355.00
IUUC-Gga-041069	Gallus gallus	49.47	0.00e+00	1125.00
IUUC-Gac-042183	Gasterosteus aculeatus	36.93	0.00e+00	634.00
IUUC-Ggo-045276	Gorilla gorilla	80.46	0.00e+00	1757.00
IUUC-Hsa-046982	Homo sapiens	79.72	0.00e+00	1715.00
IUUC-Itr-048929	Ictidomys tridecemlineatus	78.81	0.00e+00	1618.00
IUUC-Lch-049451	Latimeria chalumnae	42.23	0.00e+00	824.00
IUUC-Loc-052441	Lepisosteus oculatus	40.36	0.00e+00	796.00
IUUC-Laf-053370	Loxodonta africana	74.44	0.00e+00	1301.00
IUUC-Mcc-054975	Macaca mulatta	79.72	0.00e+00	1796.00
IUUC-Meu-056668	Macropus eugenii	57.79	0.00e+00	654.00
IUUC-Mmr-061339	Microcebus murinus	79.75	0.00e+00	1732.00
IUUC-Mdo-063054	Monodelphis domestica	56.46	0.00e+00	1215.00
IUUC-Mlu-067157	Myotis lucifugus	76.37	0.00e+00	1624.00
IUUC-Nle-069695	Nomascus leucogenys	79.79	0.00e+00	1720.00
IUUC-Ont-072336	Oreochromis niloticus	68.91	4.00e-97	350.00
IUUC-Oan-073536	Ornithorhynchus anatinus	59.83	0.00e+00	1458.00
IUUC-Ola-086470	Oryzias latipes	35.46	2.00e-174	607.00
IUUC-Oga-088658	Otolemur garnettii	78.83	0.00e+00	1758.00
IUUC-Oar-089316	Ovis aries	78.29	0.00e+00	751.00
IUUC-Ptr-091653	Pan troglodytes	80.16	0.00e+00	1730.00
IUUC-Pan-092033	Papio anubis	78.70	0.00e+00	1709.00
IUUC-Psi-093520	Pelodiscus sinensis	52.91	1.00e-99	357.00
IUUC-Pfo-096903	Poecilia formosa	37.52	0.00e+00	655.00
IUUC-Pab-098777	Pongo abelii	80.46	0.00e+00	1772.00
IUUC-Pva-102241	Pteropus vampyrus	77.26	0.00e+00	1624.00
IUUC-Rno-104949	Rattus norvegicus	71.57	0.00e+00	1567.00
IUUC-Sce-106309	Saccharomyces cerevisiae	37.50	6.00e-13	67.80
IUUC-Sha-106591	Sarcophilus harrisii	58.60	0.00e+00	1239.00
IUUC-Spo-108288	Schizosaccharomyces pombe	51.22	4.00e-11	61.60
IUUC-Tgu-116887	Taeniopygia guttata	51.38	0.00e+00	1077.00
IUUC-Tru-118394	Takifugu rubripes	32.36	8.00e-110	391.00
IUUC-Tsy-119577	Tarsius syrichta	77.53	0.00e+00	1724.00
IUUC-Tni-119998	Tetraodon nigroviridis	59.43	4.00e-102	366.00
IUUC-Tbe-127875	Tupaia belangeri	39.02	6.00e-16	80.10
IUUC-Ttr-128386	Tursiops truncatus	83.47	0.00e+00	692.00
IUUC-Vpa-130696	Vicugna pacos	39.02	7.00e-16	80.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence