iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048613

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01025107

Gene Name

PREB

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000012225.2	ENSSTOT00000012221.2	ENSSTOP00000010955.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-08	32.8	160	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlrt 32
           ++f +d tll++G+ Dg ++vW + +
   Q: 160  VCFnHDnTLLATGGTDGFVRVWKVPS 185
           5688566***************9865 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MGRRRAPELY RAPFPLYALQ VDPSAGLLIA AGGGGAAKTG IKNGVHFLQL EQINGRLSAS 60
LLHSHDTETR ATMNLALAGD ILAAGQDAQC QLLRFRVHKQ KDNKAEKAGS KEQGLRQRKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAACGCGC GGCGGGCGGG ATGGGCCGTC GCCGGGCTCC AGAGCTTTAC CGGGCCCCGT 60
TCCCGTTGTA CGCGCTTCAG GTCGACCCCA GCGCGGGCCT GCTCATCGCT GCGGGCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070971--C:endoplasmic reticulum exit site
GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0032527--P:protein exit from endoplasmic reticulum

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	22.26	2.00e-08	53.10
IUUC-Aml-001671	Ailuropoda melanoleuca	90.48	0.00e+00	664.00
IUUC-Atr-002477	Amborella trichopoda	24.88	2.00e-10	60.10
IUUC-Ath-006922	Arabidopsis thaliana	26.64	2.00e-13	69.70
IUUC-Ame-010812	Astyanax mexicanus	48.44	2.00e-60	224.00
IUUC-Bta-012386	Bos taurus	91.87	0.00e+00	701.00
IUUC-Bdi-014110	Brachypodium distachyon	30.39	2.00e-18	86.70
IUUC-Bra-017708	Brassica rapa	27.62	1.00e-15	76.60
IUUC-Cel-018480	Caenorhabditis elegans	23.99	6.00e-20	91.70
IUUC-Cja-018998	Callithrix jacchus	91.53	0.00e+00	711.00
IUUC-Cfa-020666	Canis familiaris	90.67	0.00e+00	676.00
IUUC-Cpo-022030	Cavia porcellus	80.24	1.00e-173	601.00
IUUC-Csa-023521	Chlorocebus sabaeus	92.34	0.00e+00	700.00
IUUC-Cin-025431	Ciona intestinalis	32.92	5.00e-44	171.00
IUUC-Dre-027832	Danio rerio	55.53	5.00e-127	447.00
IUUC-Dno-028989	Dasypus novemcinctus	89.23	0.00e+00	705.00
IUUC-Dme-031901	Drosophila melanogaster	31.69	7.00e-45	174.00
IUUC-Ete-032290	Echinops telfairi	88.76	0.00e+00	682.00
IUUC-Eca-033917	Equus caballus	91.63	0.00e+00	691.00
IUUC-Fca-036323	Felis catus	92.11	0.00e+00	697.00
IUUC-Gmo-038693	Gadus morhua	56.80	2.00e-124	438.00
IUUC-Gga-040702	Gallus gallus	66.59	3.00e-139	488.00
IUUC-Gac-042635	Gasterosteus aculeatus	54.78	5.00e-111	394.00
IUUC-Gma-043946	Glycine max	27.78	8.00e-18	84.30
IUUC-Ggo-044648	Gorilla gorilla	91.35	0.00e+00	668.00
IUUC-Hsa-046003	Homo sapiens	92.09	0.00e+00	701.00
IUUC-Lch-049473	Latimeria chalumnae	60.38	3.00e-137	481.00
IUUC-Lpe-051586	Leersia perrieri	27.45	4.00e-16	79.00
IUUC-Loc-052177	Lepisosteus oculatus	59.47	2.00e-132	465.00
IUUC-Laf-054366	Loxodonta africana	90.67	0.00e+00	704.00
IUUC-Mcc-055775	Macaca mulatta	92.12	0.00e+00	698.00
IUUC-Meu-056562	Macropus eugenii	79.19	1.00e-162	565.00
IUUC-Mtr-058661	Medicago truncatula	28.84	3.00e-18	85.90
IUUC-Mvi-060443	Microbotryum violaceum	24.54	2.00e-09	57.40
IUUC-Mmr-061126	Microcebus murinus	92.82	0.00e+00	689.00
IUUC-Mdo-062928	Monodelphis domestica	79.52	5.00e-164	570.00
IUUC-Mmu-064083	Mus musculus	87.77	0.00e+00	640.00
IUUC-Mac-064955	Musa acuminata	27.17	7.00e-15	74.70
IUUC-Mpu-066857	Mustela putorius furo	90.19	0.00e+00	712.00
IUUC-Mlu-067891	Myotis lucifugus	91.63	0.00e+00	680.00
IUUC-Nle-070030	Nomascus leucogenys	90.17	0.00e+00	677.00
IUUC-Opr-070864	Ochotona princeps	89.93	2.00e-132	464.00
IUUC-Ont-072204	Oreochromis niloticus	59.03	2.00e-122	432.00
IUUC-Oan-073643	Ornithorhynchus anatinus	70.71	1.00e-119	421.00
IUUC-Ocu-074217	Oryctolagus cuniculus	87.80	0.00e+00	649.00
IUUC-Oba-075587	Oryza barthii	26.51	1.00e-16	80.50
IUUC-Obr-076826	Oryza brachyantha	28.43	2.00e-17	83.20
IUUC-Ogl-077927	Oryza glaberrima	26.51	2.00e-16	79.70
IUUC-Ogu-078241	Oryza glumaepatula	26.51	4.00e-16	78.60
IUUC-Oin-080217	Oryza indica	26.51	3.00e-16	79.30
IUUC-Olo-081060	Oryza longistaminata	26.51	1.00e-16	80.90
IUUC-Ome-082007	Oryza meridionalis	26.51	1.00e-16	80.50
IUUC-Oni-082827	Oryza nivara	26.51	3.00e-16	79.30
IUUC-Opu-083159	Oryza punctata	26.54	6.00e-16	78.20
IUUC-Oru-085039	Oryza rufipogon	26.51	3.00e-16	79.30
IUUC-Osa-086258	Oryza sativa	26.51	3.00e-16	79.30
IUUC-Ola-087223	Oryzias latipes	57.14	5.00e-118	417.00
IUUC-Oga-088417	Otolemur garnettii	90.19	0.00e+00	672.00
IUUC-Oar-090435	Ovis aries	91.63	0.00e+00	699.00
IUUC-Ptr-090869	Pan troglodytes	91.85	0.00e+00	673.00
IUUC-Pan-092527	Papio anubis	92.34	0.00e+00	700.00
IUUC-Pma-094156	Petromyzon marinus	54.22	4.00e-110	391.00
IUUC-Ppa-095904	Physcomitrella patens	28.57	5.00e-11	62.00
IUUC-Pfo-097488	Poecilia formosa	51.50	2.00e-113	402.00
IUUC-Pab-097720	Pongo abelii	92.09	0.00e+00	700.00
IUUC-Pop-099618	Populus trichocarpa	27.73	1.00e-19	90.10
IUUC-Pca-100288	Procavia capensis	88.24	1.00e-169	588.00
IUUC-Ppe-101864	Prunus persica	25.37	4.00e-11	62.40
IUUC-Pva-103192	Pteropus vampyrus	92.11	0.00e+00	691.00
IUUC-Rno-106123	Rattus norvegicus	88.49	0.00e+00	650.00
IUUC-Sha-107169	Sarcophilus harrisii	79.76	2.00e-164	571.00
IUUC-Smo-109265	Selaginella moellendorffii	27.56	5.00e-13	68.20
IUUC-Sly-111551	Solanum lycopersicum	27.23	2.00e-13	69.70
IUUC-Stu-112264	Solanum tuberosum	27.23	3.00e-12	65.90
IUUC-Sar-113218	Sorex araneus	85.97	9.00e-112	395.00
IUUC-Ssc-115282	Sus scrofa	89.88	0.00e+00	650.00
IUUC-Tru-117866	Takifugu rubripes	55.12	2.00e-116	411.00
IUUC-Tca-121083	Theobroma cacao	28.21	6.00e-16	78.20
IUUC-Tae-124218	Triticum aestivum	27.95	1.00e-17	83.20
IUUC-Ttr-128585	Tursiops truncatus	89.47	0.00e+00	657.00
IUUC-Vvi-131024	Vitis vinifera	28.74	4.00e-18	85.50
IUUC-Xma-134081	Xiphophorus maculatus	51.50	1.00e-113	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence