iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099247

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_758607; POPTR_0004s03490g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s03490	POPTR_0004s03490.1	POPTR_0004s03490.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	25.38	2.00e-37	155.00	IUUC-Hsa-046958

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

METDETDRVL PFQLQFDKPV ASQVKIAEWN PEKDLLAMVT EDSKILLHRF NWQRLWTISP 60
GRNITSLCWR PDGKAIAVGL EDGTIYLHDV ENGKLLRSLK SHTVAVVCLN WEEEGQLIRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACCG ACGAGACCGA TCGCGTGCTT CCTTTCCAAC TTCAATTCGA TAAACCGGTC 60
GCTTCTCAGG TTAAAATCGC AGAGTGGAAT CCTGAAAAGG ATTTACTCGC AATGGTAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024789--APC4
IPR024790--APC4_long_dom
IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF12896--ANAPC4
PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005680--C:anaphase-promoting complex
GO:0031145--P:anaphase-promoting complex-dependent catabolic process
GO:0009793--P:embryo development ending in seed dormancy
GO:0048481--P:plant ovule development
GO:0030071--P:regulation of mitotic metaphase/anaphase transition

KEGG

pop:POPTR_0004s03490g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002338	Ailuropoda melanoleuca	25.38	7.00e-39	155.00
IUUC-Atr-003115	Amborella trichopoda	58.78	0.00e+00	848.00
IUUC-Apl-003682	Anas platyrhynchos	25.66	1.00e-33	137.00
IUUC-Aca-005052	Anolis carolinensis	25.28	1.00e-39	157.00
IUUC-Ath-007407	Arabidopsis thaliana	69.79	0.00e+00	1040.00
IUUC-Acl-008322	Aspergillus clavatus	20.91	2.00e-11	64.30
IUUC-Afl-008731	Aspergillus flavus	20.00	4.00e-15	76.60
IUUC-Afu-008986	Aspergillus fumigatus	19.41	4.00e-12	66.20
IUUC-Ani-009236	Aspergillus nidulans	20.68	8.00e-13	68.60
IUUC-Ang-009689	Aspergillus niger	19.51	2.00e-10	60.50
IUUC-Ate-010504	Aspergillus terreus	27.27	2.00e-05	44.30
IUUC-Ame-011676	Astyanax mexicanus	27.31	5.00e-41	162.00
IUUC-Bgr-012272	Blumeria graminis	22.32	3.00e-15	77.00
IUUC-Bta-013421	Bos taurus	25.16	2.00e-38	153.00
IUUC-Bdi-014507	Brachypodium distachyon	55.53	0.00e+00	801.00
IUUC-Bol-015675	Brassica oleracea	68.05	0.00e+00	1022.00
IUUC-Bra-017735	Brassica rapa	67.78	0.00e+00	1008.00
IUUC-Cja-019695	Callithrix jacchus	25.00	6.00e-37	149.00
IUUC-Cfa-020688	Canis familiaris	25.38	7.00e-39	155.00
IUUC-Cpo-022263	Cavia porcellus	25.00	9.00e-37	148.00
IUUC-Csa-023068	Chlorocebus sabaeus	25.16	2.00e-38	153.00
IUUC-Cho-024289	Choloepus hoffmanni	25.73	6.00e-20	92.40
IUUC-Cin-025329	Ciona intestinalis	23.81	7.00e-09	54.70
IUUC-Dre-028148	Danio rerio	24.79	3.00e-35	143.00
IUUC-Dno-028901	Dasypus novemcinctus	29.10	2.00e-14	73.60
IUUC-Dor-030642	Dipodomys ordii	25.40	9.00e-19	88.60
IUUC-Eca-033983	Equus caballus	25.38	3.00e-38	152.00
IUUC-Eeu-035203	Erinaceus europaeus	25.08	7.00e-24	105.00
IUUC-Fca-036269	Felis catus	25.16	2.00e-38	153.00
IUUC-Fal-036650	Ficedula albicollis	26.53	2.00e-42	166.00
IUUC-Fso-038390	Fusarium solani	22.20	7.00e-12	65.50
IUUC-Gmo-039161	Gadus morhua	25.93	3.00e-20	93.20
IUUC-Gga-041031	Gallus gallus	30.46	3.00e-19	87.80
IUUC-Gac-042424	Gasterosteus aculeatus	23.82	5.00e-34	139.00
IUUC-Gma-043402	Glycine max	73.13	0.00e+00	1113.00
IUUC-Ggo-045199	Gorilla gorilla	25.38	7.00e-39	155.00
IUUC-Hsa-046958	Homo sapiens	25.38	6.00e-39	155.00
IUUC-Itr-049044	Ictidomys tridecemlineatus	25.38	6.00e-39	155.00
IUUC-Kpa-049219	Komagataella pastoris	23.10	2.00e-15	77.00
IUUC-Lpe-050838	Leersia perrieri	52.24	0.00e+00	726.00
IUUC-Loc-052502	Lepisosteus oculatus	26.78	3.00e-41	163.00
IUUC-Lma-053262	Leptosphaeria maculans	32.63	3.00e-06	47.40
IUUC-Laf-054361	Loxodonta africana	25.38	7.00e-39	155.00
IUUC-Mcc-054893	Macaca mulatta	25.16	2.00e-38	154.00
IUUC-Mor-056950	Magnaporthe oryzae	21.13	6.00e-16	79.00
IUUC-Mpo-057479	Magnaporthe poae	20.43	3.00e-14	73.60
IUUC-Mtr-058751	Medicago truncatula	72.99	0.00e+00	1080.00
IUUC-Mga-059591	Meleagris gallopavo	27.17	4.00e-39	156.00
IUUC-Mmr-060603	Microcebus murinus	25.38	2.00e-38	153.00
IUUC-Mdo-062137	Monodelphis domestica	24.78	4.00e-38	152.00
IUUC-Mmu-064358	Mus musculus	25.38	3.00e-37	149.00
IUUC-Mac-064679	Musa acuminata	60.64	2.00e-161	561.00
IUUC-Mpu-065751	Mustela putorius furo	25.38	5.00e-39	155.00
IUUC-Mlu-067502	Myotis lucifugus	25.05	1.00e-37	150.00
IUUC-Nfi-068257	Neosartorya fischeri	20.40	2.00e-13	70.90
IUUC-Ncr-068721	Neurospora crassa	20.77	3.00e-06	47.00
IUUC-Nle-069134	Nomascus leucogenys	25.38	3.00e-39	156.00
IUUC-Opr-071225	Ochotona princeps	24.20	2.00e-32	133.00
IUUC-Ont-072232	Oreochromis niloticus	23.63	2.00e-33	137.00
IUUC-Oan-073358	Ornithorhynchus anatinus	25.05	1.00e-37	150.00
IUUC-Oba-075232	Oryza barthii	51.57	0.00e+00	719.00
IUUC-Oin-079188	Oryza indica	49.65	0.00e+00	678.00
IUUC-Opu-083725	Oryza punctata	53.17	0.00e+00	746.00
IUUC-Osa-086145	Oryza sativa	73.39	5.00e-49	185.00
IUUC-Ola-086672	Oryzias latipes	25.68	2.00e-38	153.00
IUUC-Oga-088691	Otolemur garnettii	25.16	2.00e-38	154.00
IUUC-Oar-089607	Ovis aries	25.38	1.00e-38	154.00
IUUC-Ptr-090893	Pan troglodytes	25.16	2.00e-38	153.00
IUUC-Pan-092793	Papio anubis	25.16	4.00e-38	153.00
IUUC-Psi-093143	Pelodiscus sinensis	23.33	1.00e-33	137.00
IUUC-Pma-094645	Petromyzon marinus	24.89	8.00e-32	131.00
IUUC-Ppa-095509	Physcomitrella patens	38.30	3.00e-120	425.00
IUUC-Pfo-096716	Poecilia formosa	25.39	3.00e-41	163.00
IUUC-Pab-098772	Pongo abelii	25.81	4.00e-39	156.00
IUUC-Pca-101083	Procavia capensis	24.83	2.00e-24	107.00
IUUC-Ppe-101619	Prunus persica	77.41	0.00e+00	1056.00
IUUC-Pva-103168	Pteropus vampyrus	25.38	1.00e-38	154.00
IUUC-Rno-105693	Rattus norvegicus	25.38	2.00e-37	150.00
IUUC-Sha-106567	Sarcophilus harrisii	24.78	3.00e-37	149.00
IUUC-Sja-107773	Schizosaccharomyces japonicus	21.46	1.00e-17	84.70
IUUC-Spo-108176	Schizosaccharomyces pombe	19.49	3.00e-14	73.20
IUUC-Ssl-108414	Sclerotinia sclerotiorum	20.14	5.00e-20	92.40
IUUC-Smo-108903	Selaginella moellendorffii	48.11	4.00e-38	151.00
IUUC-Sit-110467	Setaria italica	53.62	0.00e+00	755.00
IUUC-Sly-111734	Solanum lycopersicum	67.38	0.00e+00	984.00
IUUC-Sar-112993	Sorex araneus	24.79	4.00e-09	56.20
IUUC-Sbi-114693	Sorghum bicolor	51.64	0.00e+00	738.00
IUUC-Ssc-115237	Sus scrofa	25.38	1.00e-38	154.00
IUUC-Tgu-116897	Taeniopygia guttata	26.11	2.00e-41	163.00
IUUC-Tru-117802	Takifugu rubripes	26.36	8.00e-36	145.00
IUUC-Tsy-119583	Tarsius syrichta	26.70	1.00e-22	101.00
IUUC-Tni-120268	Tetraodon nigroviridis	23.34	1.00e-19	90.50
IUUC-Tca-121296	Theobroma cacao	77.61	0.00e+00	1174.00
IUUC-Tae-123786	Triticum aestivum	54.45	0.00e+00	786.00
IUUC-Tbe-127711	Tupaia belangeri	25.23	2.00e-32	133.00
IUUC-Ttr-128537	Tursiops truncatus	26.70	2.00e-22	100.00
IUUC-Vda-130028	Verticillium dahliae	32.65	2.00e-03	37.40
IUUC-Vpa-130111	Vicugna pacos	22.64	3.00e-09	57.00
IUUC-Vvi-131490	Vitis vinifera	76.20	0.00e+00	1149.00
IUUC-Xtr-132380	Xenopus tropicalis	25.88	3.00e-41	163.00
IUUC-Xma-133597	Xiphophorus maculatus	25.39	2.00e-41	163.00
IUUC-Yli-134609	Yarrowia lipolytica	21.23	7.00e-15	75.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence