iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cin-025375

UUCD1 version

UUC-CiI-00520

Ensembl Protein ID

ENSCINP00000012753.3

UniProt Accession

Q1RPU5; F7BKH4; Q1RPU5_CIOIN

Genbank Protein ID

BAE93340.1

Protein Name

Zinc finger protein

Genbank Nucleotide ID

AK222458

Gene Name

zf(ring)-30; Ci-ZF(RING)-30

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000006174.3	ENSCINT00000012753.3	ENSCINP00000012753.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-22	76.9	430	460
E3 activity/RING/RING	1.00e-05	25.7	38	75
E3 activity/RING/U-box	3.30e-08	33.3	34	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+ + ++++f   d +ll+sGsdD  +k+W+
   Q: 430  HEKRCWSVDFnsVDpRLLASGSDDARVKLWS 460
           7788899***9966799*************9 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC++ +++  + + CgH+f+ +Cl+k         ++ +C  C
   Q: 38   CPICFNLIEE-AYMTKCGHTFCYNCLKKS------LEQSNKCTKC 75
           ********99.888************777......7777788777 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqa 67
           ++f+CpI ++l ++  ++++G+t+  ++++k l++++k c+++++ l+++d   Pn+ l +liq+
   Q: 34   SDFICPICFNLIEEAYMTKCGHTFCYNCLKKSLEQSNK-CTKCNSALSKTDEiYPNYLLNNLIQK 97
           79***********************************9.********7776659*********97 PP

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

MKRSSSGSSI KPTVPENATP LQPTVLGSYR EMNSDFICPI CFNLIEEAYM TKCGHTFCYN 60
CLKKSLEQSN KCTKCNSALS KTDEIYPNYL LNNLIQKKKK KMDEMLACSK RMKIDSRLWE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAACGTT CTTCAAGTGG CAGTTCAATA AAACCGACCG TGCCAGAAAA TGCCACCCCC 60
TTACAACCAA CAGTGCTTGG TTCTTATAGG GAAATGAACA GCGACTTTAT TTGTCCAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

cin:778892

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	37.48	3.00e-118	417.00
IUUC-Aml-001265	Ailuropoda melanoleuca	54.94	0.00e+00	683.00
IUUC-Atr-002460	Amborella trichopoda	38.92	2.00e-124	438.00
IUUC-Apl-003796	Anas platyrhynchos	55.74	0.00e+00	646.00
IUUC-Aca-005078	Anolis carolinensis	55.57	0.00e+00	690.00
IUUC-Aly-006014	Arabidopsis lyrata	39.22	2.00e-126	444.00
IUUC-Ath-007636	Arabidopsis thaliana	39.22	4.00e-127	447.00
IUUC-Ame-011176	Astyanax mexicanus	71.90	2.00e-52	198.00
IUUC-Bta-012595	Bos taurus	55.56	0.00e+00	687.00
IUUC-Bdi-014152	Brachypodium distachyon	37.23	2.00e-121	428.00
IUUC-Bol-016380	Brassica oleracea	38.58	1.00e-127	448.00
IUUC-Bra-017690	Brassica rapa	38.12	6.00e-123	433.00
IUUC-Cja-018926	Callithrix jacchus	55.56	0.00e+00	686.00
IUUC-Cfa-021088	Canis familiaris	55.40	0.00e+00	685.00
IUUC-Cpo-022442	Cavia porcellus	55.16	0.00e+00	657.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	32.25	2.00e-30	124.00
IUUC-Csa-024119	Chlorocebus sabaeus	55.24	0.00e+00	681.00
IUUC-Cho-024883	Choloepus hoffmanni	45.10	1.00e-68	253.00
IUUC-Cme-027350	Cyanidioschyzon merolae	40.21	1.00e-75	276.00
IUUC-Dre-028453	Danio rerio	54.10	0.00e+00	676.00
IUUC-Dno-029887	Dasypus novemcinctus	56.03	0.00e+00	689.00
IUUC-Dor-031110	Dipodomys ordii	54.44	8.00e-148	515.00
IUUC-Ete-033016	Echinops telfairi	60.99	5.00e-138	483.00
IUUC-Eca-034403	Equus caballus	55.57	0.00e+00	645.00
IUUC-Eeu-034690	Erinaceus europaeus	56.48	8.00e-132	462.00
IUUC-Fca-036475	Felis catus	56.02	0.00e+00	645.00
IUUC-Fal-037189	Ficedula albicollis	56.13	0.00e+00	672.00
IUUC-Gmo-039245	Gadus morhua	54.43	0.00e+00	677.00
IUUC-Gga-040806	Gallus gallus	55.71	0.00e+00	687.00
IUUC-Gac-042177	Gasterosteus aculeatus	53.36	0.00e+00	684.00
IUUC-Gma-044187	Glycine max	38.57	5.00e-120	423.00
IUUC-Ggo-044430	Gorilla gorilla	49.90	6.00e-131	459.00
IUUC-Hsa-045853	Homo sapiens	55.40	0.00e+00	685.00
IUUC-Hvu-047750	Hordeum vulgare	45.40	1.00e-89	323.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	67.66	8.00e-96	341.00
IUUC-Lch-050420	Latimeria chalumnae	55.59	0.00e+00	686.00
IUUC-Lpe-051219	Leersia perrieri	38.03	6.00e-120	423.00
IUUC-Loc-052728	Lepisosteus oculatus	55.28	0.00e+00	654.00
IUUC-Laf-053775	Loxodonta africana	55.59	0.00e+00	686.00
IUUC-Meu-056595	Macropus eugenii	55.81	8.00e-84	303.00
IUUC-Mtr-058555	Medicago truncatula	38.03	2.00e-127	447.00
IUUC-Mga-059646	Meleagris gallopavo	55.63	0.00e+00	647.00
IUUC-Mmr-060990	Microcebus murinus	55.33	0.00e+00	680.00
IUUC-Mdo-062287	Monodelphis domestica	55.56	0.00e+00	687.00
IUUC-Mmu-064097	Mus musculus	55.87	0.00e+00	689.00
IUUC-Mac-065057	Musa acuminata	46.95	9.00e-98	349.00
IUUC-Mpu-066612	Mustela putorius furo	56.19	0.00e+00	649.00
IUUC-Mlu-067967	Myotis lucifugus	55.41	0.00e+00	643.00
IUUC-Nle-069543	Nomascus leucogenys	55.56	0.00e+00	687.00
IUUC-Opr-070366	Ochotona princeps	62.23	1.00e-67	249.00
IUUC-Ont-071522	Oreochromis niloticus	53.52	0.00e+00	683.00
IUUC-Oan-073409	Ornithorhynchus anatinus	55.93	0.00e+00	643.00
IUUC-Ocu-073756	Oryctolagus cuniculus	55.66	0.00e+00	665.00
IUUC-Oba-075149	Oryza barthii	38.82	4.00e-124	438.00
IUUC-Obr-076563	Oryza brachyantha	39.16	3.00e-124	437.00
IUUC-Ogl-077701	Oryza glaberrima	38.85	2.00e-124	438.00
IUUC-Ogu-078383	Oryza glumaepatula	38.85	2.00e-124	438.00
IUUC-Oin-079965	Oryza indica	37.00	3.00e-111	394.00
IUUC-Olo-080639	Oryza longistaminata	37.92	1.00e-121	429.00
IUUC-Ome-081821	Oryza meridionalis	39.24	4.00e-112	398.00
IUUC-Oni-082622	Oryza nivara	38.85	2.00e-124	438.00
IUUC-Opu-083295	Oryza punctata	38.70	5.00e-124	437.00
IUUC-Oru-084661	Oryza rufipogon	38.85	2.00e-124	438.00
IUUC-Osa-085766	Oryza sativa	38.85	2.00e-124	438.00
IUUC-Ola-086727	Oryzias latipes	54.39	0.00e+00	682.00
IUUC-Olu-087702	Ostreococcus lucimarinus	42.77	5.00e-66	242.00
IUUC-Oga-088215	Otolemur garnettii	54.63	0.00e+00	666.00
IUUC-Oar-089880	Ovis aries	54.85	0.00e+00	666.00
IUUC-Ptr-090597	Pan troglodytes	55.40	0.00e+00	685.00
IUUC-Pan-091987	Papio anubis	55.56	0.00e+00	686.00
IUUC-Psi-094033	Pelodiscus sinensis	56.07	0.00e+00	659.00
IUUC-Pma-094587	Petromyzon marinus	53.58	5.00e-170	589.00
IUUC-Ppa-095573	Physcomitrella patens	37.90	2.00e-124	437.00
IUUC-Pfo-097388	Poecilia formosa	53.08	0.00e+00	678.00
IUUC-Pab-098029	Pongo abelii	55.49	0.00e+00	685.00
IUUC-Pop-099319	Populus trichocarpa	39.10	4.00e-128	450.00
IUUC-Pca-100846	Procavia capensis	67.02	1.00e-155	542.00
IUUC-Ppe-101250	Prunus persica	38.17	3.00e-120	424.00
IUUC-Pva-102407	Pteropus vampyrus	55.40	0.00e+00	678.00
IUUC-Rno-105312	Rattus norvegicus	55.87	0.00e+00	688.00
IUUC-Sha-106514	Sarcophilus harrisii	66.76	1.00e-149	521.00
IUUC-Smo-109418	Selaginella moellendorffii	38.79	3.00e-123	434.00
IUUC-Sit-110248	Setaria italica	38.94	1.00e-123	435.00
IUUC-Sly-110895	Solanum lycopersicum	38.41	8.00e-128	449.00
IUUC-Stu-112882	Solanum tuberosum	39.10	1.00e-119	422.00
IUUC-Sar-113230	Sorex araneus	43.51	4.00e-132	463.00
IUUC-Sbi-113962	Sorghum bicolor	37.05	2.00e-118	418.00
IUUC-Ssc-115987	Sus scrofa	41.39	1.00e-57	216.00
IUUC-Tgu-116471	Taeniopygia guttata	55.28	0.00e+00	679.00
IUUC-Tru-118231	Takifugu rubripes	54.33	0.00e+00	666.00
IUUC-Tsy-119415	Tarsius syrichta	55.46	0.00e+00	643.00
IUUC-Tni-120893	Tetraodon nigroviridis	53.98	0.00e+00	664.00
IUUC-Tca-121619	Theobroma cacao	37.84	3.00e-122	431.00
IUUC-Tae-125524	Triticum aestivum	37.73	6.00e-125	439.00
IUUC-Tur-126557	Triticum urartu	38.03	9.00e-121	426.00
IUUC-Tbe-127253	Tupaia belangeri	53.40	3.00e-113	401.00
IUUC-Ttr-129100	Tursiops truncatus	55.09	0.00e+00	626.00
IUUC-Vpa-130613	Vicugna pacos	51.37	7.00e-171	592.00
IUUC-Vvi-131386	Vitis vinifera	37.45	3.00e-122	431.00
IUUC-Xtr-132033	Xenopus tropicalis	55.13	0.00e+00	714.00
IUUC-Xma-133421	Xiphophorus maculatus	53.08	0.00e+00	679.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence