iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099369

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RWD domain-containing family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_551959; POPTR_0002s13900g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s13900	POPTR_0002s13900.1	POPTR_0002s13900.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	30.0	121	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.....kdg.....plvlpCgHvfhadClqkw.......pglknssskefr..............................CPl 44
           C++C+++f     +        ++++C H+fh +C+ +w       +    +s+++ +                              CP+
   Q: 121  CPLCMCPFvpedeQ-DealpfMKLMSCFHCFHCECIVRWwnwiqkeK----ESNTSTSssttllqikemgnqnglsdvhgvleermgdCPV 206
           ********997552.04675556899**********99999866431....2222222446788999999999****************** PP
   S: 45   Cr 46
           Cr
   Q: 207  CR 208
           *8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAEEEVLIEV EAVLAMYGDD CVILESFPPH LHLHIKPRTA DISSQQFVEA VIGIRAGPQY 60
PSKPPWIDLI ESKGLDGERQ KQLITGIQEK ACELSSCLML VALCEEAVEK LTVMNHPDGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGAAAAAA AAGAAAAGAG AAAAGAGGAA TTAAATTGAT GCTCCTCCTC CATCACCGGA 60
CACCACTTCA ACATTAGCGT GCAGAACAAT AAGGAAGCTT AGCATAGCCA GCTGTTAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50908--RWD
PS50089--ZF_RING_2

Pfam

PF05773--RWD

SMART

SM00184--RING
SM00591--RWD

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0002s13900g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001954	Ailuropoda melanoleuca	29.22	1.00e-12	67.00
IUUC-Atr-002830	Amborella trichopoda	44.99	6.00e-81	293.00
IUUC-Apl-003293	Anas platyrhynchos	26.00	1.00e-11	63.90
IUUC-Aca-005092	Anolis carolinensis	26.81	8.00e-14	71.20
IUUC-Aly-005434	Arabidopsis lyrata	54.48	2.00e-83	301.00
IUUC-Ath-006770	Arabidopsis thaliana	58.33	4.00e-95	340.00
IUUC-Ame-011754	Astyanax mexicanus	25.71	4.00e-11	62.40
IUUC-Bta-012592	Bos taurus	25.84	3.00e-13	69.30
IUUC-Bdi-015061	Brachypodium distachyon	51.65	5.00e-78	284.00
IUUC-Bol-015743	Brassica oleracea	61.25	8.00e-94	336.00
IUUC-Bra-018072	Brassica rapa	61.57	3.00e-90	324.00
IUUC-Cja-018930	Callithrix jacchus	23.97	1.00e-13	70.10
IUUC-Cfa-020156	Canis familiaris	25.84	6.00e-14	71.60
IUUC-Cpo-021290	Cavia porcellus	24.58	4.00e-13	68.90
IUUC-Csa-023214	Chlorocebus sabaeus	25.28	4.00e-15	75.50
IUUC-Cin-025416	Ciona intestinalis	29.37	3.00e-10	59.30
IUUC-Csv-026360	Ciona savignyi	24.44	1.00e-05	43.90
IUUC-Dre-028670	Danio rerio	31.68	5.00e-07	48.90
IUUC-Dno-029970	Dasypus novemcinctus	26.59	4.00e-13	68.60
IUUC-Dor-030152	Dipodomys ordii	23.42	4.00e-07	48.90
IUUC-Dme-031914	Drosophila melanogaster	26.02	4.00e-11	61.60
IUUC-Ete-033105	Echinops telfairi	26.57	3.00e-12	66.20
IUUC-Eca-033800	Equus caballus	25.84	1.00e-13	70.50
IUUC-Eeu-034525	Erinaceus europaeus	25.62	2.00e-04	40.00
IUUC-Fca-035644	Felis catus	25.84	1.00e-15	77.00
IUUC-Fal-037121	Ficedula albicollis	24.33	1.00e-12	67.40
IUUC-Gmo-039444	Gadus morhua	31.61	3.00e-09	55.80
IUUC-Gga-041221	Gallus gallus	26.21	3.00e-07	48.90
IUUC-Gac-042354	Gasterosteus aculeatus	25.97	5.00e-14	72.00
IUUC-Gma-043721	Glycine max	50.28	1.00e-90	326.00
IUUC-Ggo-044879	Gorilla gorilla	24.91	1.00e-14	73.90
IUUC-Hsa-045739	Homo sapiens	24.91	1.00e-14	74.30
IUUC-Itr-047915	Ictidomys tridecemlineatus	26.02	4.00e-12	65.50
IUUC-Lch-050277	Latimeria chalumnae	30.08	4.00e-09	55.50
IUUC-Lpe-051139	Leersia perrieri	51.42	5.00e-72	264.00
IUUC-Laf-053559	Loxodonta africana	25.29	7.00e-19	87.80
IUUC-Mcc-055367	Macaca mulatta	25.22	9.00e-13	67.80
IUUC-Meu-056730	Macropus eugenii	30.57	8.00e-11	60.80
IUUC-Mtr-058418	Medicago truncatula	50.83	1.00e-96	345.00
IUUC-Mga-060090	Meleagris gallopavo	27.53	4.00e-05	42.40
IUUC-Mmr-060618	Microcebus murinus	25.28	5.00e-15	75.10
IUUC-Mdo-063084	Monodelphis domestica	29.22	2.00e-10	60.10
IUUC-Mmu-063854	Mus musculus	25.50	2.00e-15	76.60
IUUC-Mac-064922	Musa acuminata	51.58	7.00e-86	310.00
IUUC-Mpu-066419	Mustela putorius furo	25.19	3.00e-14	72.40
IUUC-Mlu-067289	Myotis lucifugus	28.57	1.00e-12	67.40
IUUC-Nle-069090	Nomascus leucogenys	24.91	9.00e-15	74.30
IUUC-Opr-070601	Ochotona princeps	25.47	3.00e-13	69.30
IUUC-Ont-072434	Oreochromis niloticus	26.98	8.00e-15	74.70
IUUC-Ocu-074855	Oryctolagus cuniculus	27.23	1.00e-13	70.50
IUUC-Oba-075792	Oryza barthii	52.75	9.00e-78	283.00
IUUC-Obr-076917	Oryza brachyantha	43.82	3.00e-77	281.00
IUUC-Ogl-077872	Oryza glaberrima	50.89	1.00e-75	276.00
IUUC-Ogu-078151	Oryza glumaepatula	52.00	1.00e-77	282.00
IUUC-Oin-079465	Oryza indica	51.64	1.00e-76	279.00
IUUC-Olo-080907	Oryza longistaminata	51.65	7.00e-63	234.00
IUUC-Ome-081752	Oryza meridionalis	52.38	5.00e-77	280.00
IUUC-Oni-082420	Oryza nivara	51.64	8.00e-77	280.00
IUUC-Opu-083810	Oryza punctata	53.11	4.00e-78	284.00
IUUC-Oru-085177	Oryza rufipogon	52.75	8.00e-78	283.00
IUUC-Ola-087231	Oryzias latipes	32.56	1.00e-11	62.00
IUUC-Oga-088963	Otolemur garnettii	25.28	6.00e-16	78.20
IUUC-Oar-089292	Ovis aries	26.02	2.00e-14	73.20
IUUC-Ptr-091214	Pan troglodytes	24.91	3.00e-14	72.80
IUUC-Pan-092823	Papio anubis	24.91	3.00e-15	75.90
IUUC-Pfo-096406	Poecilia formosa	26.35	1.00e-13	70.50
IUUC-Pab-098212	Pongo abelii	24.91	2.00e-14	73.20
IUUC-Pca-100897	Procavia capensis	23.33	2.00e-11	63.20
IUUC-Ppe-101702	Prunus persica	68.46	5.00e-105	374.00
IUUC-Pva-102899	Pteropus vampyrus	25.84	3.00e-14	72.40
IUUC-Rno-105369	Rattus norvegicus	26.32	5.00e-15	75.10
IUUC-Sha-107344	Sarcophilus harrisii	29.22	1.00e-10	60.50
IUUC-Smo-109636	Selaginella moellendorffii	46.39	6.00e-40	155.00
IUUC-Sit-109795	Setaria italica	43.63	9.00e-77	279.00
IUUC-Sly-111014	Solanum lycopersicum	53.58	1.00e-102	367.00
IUUC-Stu-112139	Solanum tuberosum	53.56	2.00e-104	371.00
IUUC-Sbi-114714	Sorghum bicolor	47.00	1.00e-76	279.00
IUUC-Ssc-115465	Sus scrofa	24.85	2.00e-12	66.20
IUUC-Tgu-117113	Taeniopygia guttata	27.31	3.00e-14	72.40
IUUC-Tca-121748	Theobroma cacao	58.02	4.00e-109	387.00
IUUC-Tae-123014	Triticum aestivum	49.09	6.00e-76	276.00
IUUC-Tbe-127584	Tupaia belangeri	26.73	2.00e-03	36.60
IUUC-Ttr-128244	Tursiops truncatus	26.22	3.00e-14	72.80
IUUC-Vpa-130354	Vicugna pacos	25.47	7.00e-13	67.80
IUUC-Xtr-132402	Xenopus tropicalis	24.53	4.00e-11	62.00
IUUC-Xma-133442	Xiphophorus maculatus	30.82	9.00e-13	67.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence