iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086491

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04068227

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000007107.1	ENSORLT00000008922.1	ENSORLP00000008921.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.00e-18	66.0	521	566

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    l++C+ C++ +H +Cl+++  +e pn e w Cp+C s
   Q: 521  EFCRVCKDGGE----LLCCDTCTSSYHIHCLNPP-LPEIPNGE-WLCPRCLS 566
           58*********....*******************.*******8.******65 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSSPLRSCEE DEGLVVNSEG GDFDEEDDDG DLNENASDIN SPAAPRETAT VAAPGTVKLR 60
ELHPSLFPVP QLQLSLPPDD DRSDREVPIR KKGRPKKKKD AKKKDKDGKP PKTKKRKKID 120

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Nucleotide Sequence
(Fasta)

ATGTCCTCTC CTCTCCGGTC CTGTGAGGAA GACGAGGGCC TGGTGGTTAA TTCCGAGGGA 60
GGAGATTTTG ATGAAGAAGA CGACGACGGA GACCTAAACG AGAACGCAAG CGACATAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028722--CHD3
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0007417--P:central nervous system development
GO:0051297--P:centrosome organization
GO:0006325--P:chromatin organization
GO:0048589--P:developmental growth
GO:0006355--P:regulation of transcription, DNA-templated
GO:0007051--P:spindle organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011352	Astyanax mexicanus	74.30	0.00e+00	1934.00
IUUC-Dre-028043	Danio rerio	73.55	0.00e+00	1891.00
IUUC-Gac-041375	Gasterosteus aculeatus	74.38	0.00e+00	2591.00
IUUC-Ont-072235	Oreochromis niloticus	76.06	0.00e+00	2180.00
IUUC-Pfo-096265	Poecilia formosa	75.28	0.00e+00	2593.00
IUUC-Sar-113511	Sorex araneus	32.66	1.00e-64	242.00
IUUC-Tru-118648	Takifugu rubripes	77.26	0.00e+00	2135.00
IUUC-Tni-120039	Tetraodon nigroviridis	79.48	0.00e+00	2152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence