iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027476

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-specific peptidase 2b

Genbank Nucleotide ID

CR339044

Gene Name

usp2b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000074120.3	ENSDART00000115128.3	ENSDARP00000100330.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.90e-100	335.4	62	391

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw.kskkkavsprellkalkkeaeefsgye 88
           +Gl+NlgNtC+mNS+LQcLsn+++lr+++l+ ++++++ +n+   k++l+++++kl + +w + +++a+sp++++ +++k+a++f gy+
   Q: 62   VGLRNLGNTCFMNSILQCLSNTHDLRDYCLR-NTHRTDLNNNCRAKAALMDEFAKLTQTIWtSASNEAISPSDFKMQIQKYAPRFVGYN 149
           6******************************.888888888999*****************999999********************** PP
   S: 89   qqDaqEflaflldqleeelkk...eknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlsl 174
           qqDaqEfl+flld+l++e+++   +++ p+e++ + ++ e+ +  ++k  ++++s ++dlF gqlks+++c ec+  s+ ++pf+dlsl
   Q: 150  QQDAQEFLRFLLDGLHNEVNRvtvKSRAPVEDLDHLSEDEKGKRMWNKYLESEDSKVVDLFVGQLKSSLTCSECGFCSTVFDPFWDLSL 238
           *******************9976666667777777777777777********************************************* PP
   S: 175  pvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldls 262
           p+ + +   + sl+dcL+ ftke+ l+g+++  c +ck +++++kk++++k+P++L+lhLkRf  se + + +k+++ v+fpl+ Ldl+
   Q: 239  PIAKTSG--EVSLNDCLRLFTKEDVLDGNERPTCHRCKTRRKCTKKFTIQKFPKILVLHLKRF--SECRVRTSKLSTFVNFPLKeLDLR 323
           ***9995..57****************************************************..7778999***********99**** PP
   S: 263  pfctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYk 336
           +f ++++    ++  Y+L+av +H+G++ +GHY+ay+++   + W++++Ds+V++++ ++v++   s+aYvlfY+
   Q: 324  EFASDNS----VNAVYNLYAVSNHTGTSLGGHYTAYCRSPCTGeWYTYNDSRVSPMSSSQVCS---SDAYVLFYE 391
           ***9944....389*************************76556*******************...********7 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MPSIRQSYTV TVPEEPPASA FPFIKQDMRR KSPTMSRSML VSTFVGLLIN QAKNSKNAQG 60
LVGLRNLGNT CFMNSILQCL SNTHDLRDYC LRNTHRTDLN NNCRAKAALM DEFAKLTQTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGAGTA TACGACAATC TTACACGGTC ACTGTCCCGG AGGAACCGCC GGCTTCGGCT 60
TTCCCCTTCA TCAAGCAGGA TATGCGCAGA AAAAGTCCGA CAATGTCTCG CTCTATGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011102	Astyanax mexicanus	89.20	0.00e+00	676.00
IUUC-Bol-015281	Brassica oleracea	38.11	5.00e-50	192.00
IUUC-Bra-017228	Brassica rapa	37.73	8.00e-52	198.00
IUUC-Cin-025797	Ciona intestinalis	53.71	4.00e-104	371.00
IUUC-Csv-026132	Ciona savignyi	52.82	1.00e-102	367.00
IUUC-Dme-032208	Drosophila melanogaster	49.26	2.00e-80	294.00
IUUC-Gmo-039129	Gadus morhua	70.46	3.00e-152	531.00
IUUC-Gac-042475	Gasterosteus aculeatus	76.50	5.00e-166	577.00
IUUC-Kpa-049321	Komagataella pastoris	33.70	5.00e-46	179.00
IUUC-Ont-071573	Oreochromis niloticus	76.07	1.00e-165	576.00
IUUC-Ola-086724	Oryzias latipes	75.31	9.00e-180	622.00
IUUC-Pma-094462	Petromyzon marinus	68.98	2.00e-78	285.00
IUUC-Pno-094986	Phaeosphaeria nodorum	30.48	2.00e-41	164.00
IUUC-Pte-104348	Pyrenophora teres	30.37	5.00e-40	160.00
IUUC-Sce-106166	Saccharomyces cerevisiae	34.88	2.00e-50	194.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence