iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088422

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03060041

Gene Name

TRIM39

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000000903.2	ENSOGAT00000000904.2	ENSOGAP00000000807.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-08	34.1	29	70
E3 activity/RING/U-box	6.70e-08	32.5	27	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle +k+ p++  CgH f++ C+ +w        + f CP+Cr
   Q: 29   CSVCLEYLKE-PVIIECGHNFCKACITRW---WEDLERDFPCPVCR 70
           ********99.999************999...666889999****8 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrl 64
             C++ le  ++Pv++++G+ + +++I +w ++ ++   cPv+r++ + ++l Pn  l ++
   Q: 27   ASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERdfPCPVCRKTSRYRSLRPNRQLGSM 87
           68*****************************88887799****************998766 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MAETSLLEAG ASAASTAAAL ENLQVEASCS VCLEYLKEPV IIECGHNFCK ACITRWWEDL 60
ERDFPCPVCR KTSRYRSLRP NRQLGSMVEI AKQLQSVKRK IRDENLCSQH HEPLSLFCYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAGA CAAGTCTGTT AGAGGCTGGG GCCTCTGCGG CCTCCACAGC TGCAGCTCTG 60
GAGAACTTAC AGGTGGAAGC AAGTTGTTCT GTGTGCTTGG AGTATCTTAA GGAGCCTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0008270--F:zinc ion binding
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:2001235--P:positive regulation of apoptotic signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001603	Ailuropoda melanoleuca	93.45	0.00e+00	923.00
IUUC-Apl-003354	Anas platyrhynchos	41.65	4.00e-106	378.00
IUUC-Aca-005381	Anolis carolinensis	67.63	0.00e+00	654.00
IUUC-Ame-011639	Astyanax mexicanus	33.40	4.00e-72	265.00
IUUC-Bta-012554	Bos taurus	89.11	5.00e-152	530.00
IUUC-Cel-018208	Caenorhabditis elegans	33.33	7.00e-08	52.40
IUUC-Cja-019323	Callithrix jacchus	94.20	0.00e+00	906.00
IUUC-Cfa-020342	Canis familiaris	93.37	0.00e+00	920.00
IUUC-Cpo-022084	Cavia porcellus	88.78	2.00e-151	528.00
IUUC-Csa-023186	Chlorocebus sabaeus	94.00	0.00e+00	926.00
IUUC-Cho-024697	Choloepus hoffmanni	82.16	0.00e+00	823.00
IUUC-Csv-026245	Ciona savignyi	38.81	3.00e-11	62.00
IUUC-Dor-031021	Dipodomys ordii	86.86	2.00e-144	505.00
IUUC-Ete-032936	Echinops telfairi	80.23	4.00e-144	503.00
IUUC-Eca-033687	Equus caballus	89.44	2.00e-152	531.00
IUUC-Eeu-034957	Erinaceus europaeus	90.25	4.00e-124	437.00
IUUC-Fca-035406	Felis catus	93.17	0.00e+00	919.00
IUUC-Fal-036705	Ficedula albicollis	44.86	1.00e-95	343.00
IUUC-Gmo-038505	Gadus morhua	34.80	1.00e-72	267.00
IUUC-Gga-040382	Gallus gallus	43.68	7.00e-106	377.00
IUUC-Gac-041919	Gasterosteus aculeatus	35.40	2.00e-70	259.00
IUUC-Ggo-044526	Gorilla gorilla	88.50	0.00e+00	909.00
IUUC-Hsa-045719	Homo sapiens	88.50	0.00e+00	909.00
IUUC-Itr-048404	Ictidomys tridecemlineatus	94.82	0.00e+00	939.00
IUUC-Lch-049787	Latimeria chalumnae	39.75	2.00e-86	313.00
IUUC-Loc-052206	Lepisosteus oculatus	37.45	3.00e-86	312.00
IUUC-Laf-054295	Loxodonta africana	92.58	0.00e+00	916.00
IUUC-Mcc-055765	Macaca mulatta	89.72	0.00e+00	911.00
IUUC-Meu-055997	Macropus eugenii	57.43	2.00e-122	432.00
IUUC-Mga-059412	Meleagris gallopavo	43.70	9.00e-103	367.00
IUUC-Mmr-061030	Microcebus murinus	92.16	0.00e+00	660.00
IUUC-Mdo-062936	Monodelphis domestica	87.35	0.00e+00	830.00
IUUC-Mmu-063767	Mus musculus	92.75	0.00e+00	917.00
IUUC-Mpu-066160	Mustela putorius furo	93.45	0.00e+00	924.00
IUUC-Mlu-068126	Myotis lucifugus	87.46	3.00e-149	521.00
IUUC-Nle-070041	Nomascus leucogenys	84.02	0.00e+00	792.00
IUUC-Opr-070394	Ochotona princeps	88.24	0.00e+00	905.00
IUUC-Oan-072828	Ornithorhynchus anatinus	55.44	2.00e-156	545.00
IUUC-Ocu-073980	Oryctolagus cuniculus	90.54	0.00e+00	672.00
IUUC-Oar-089277	Ovis aries	88.41	0.00e+00	848.00
IUUC-Ptr-090853	Pan troglodytes	88.50	0.00e+00	909.00
IUUC-Pan-091993	Papio anubis	94.00	0.00e+00	926.00
IUUC-Psi-092975	Pelodiscus sinensis	71.59	2.00e-180	624.00
IUUC-Pfo-096831	Poecilia formosa	32.26	7.00e-69	254.00
IUUC-Pab-097944	Pongo abelii	94.00	0.00e+00	926.00
IUUC-Pca-100795	Procavia capensis	77.10	1.00e-158	552.00
IUUC-Pva-103180	Pteropus vampyrus	86.99	0.00e+00	890.00
IUUC-Rno-105736	Rattus norvegicus	94.20	0.00e+00	936.00
IUUC-Sha-107411	Sarcophilus harrisii	50.72	2.00e-141	495.00
IUUC-Sar-113371	Sorex araneus	84.31	0.00e+00	716.00
IUUC-Ssc-116025	Sus scrofa	93.79	0.00e+00	924.00
IUUC-Tgu-116998	Taeniopygia guttata	45.44	3.00e-98	352.00
IUUC-Tru-117532	Takifugu rubripes	33.95	9.00e-70	257.00
IUUC-Tsy-119072	Tarsius syrichta	80.63	2.00e-171	594.00
IUUC-Tni-120490	Tetraodon nigroviridis	33.40	3.00e-73	269.00
IUUC-Tbe-127820	Tupaia belangeri	86.98	6.00e-139	487.00
IUUC-Ttr-128310	Tursiops truncatus	89.03	1.00e-123	436.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence