iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132375

Ensembl Protein ID

ENSXETP00000032560.3

UniProt Accession

F7CTX3; F7CTX3_XENTR

Genbank Protein ID

ENSXETP00000032560

Protein Name

Neighbor of BRCA1 gene 1

Genbank Nucleotide ID

AAMC01013923

Gene Name

nbr1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000014883.3	ENSXETT00000032560.3	ENSXETP00000032560.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	34.88	2.00e-12	72.00	IUUC-Ath-006835
UBD/Alpha-Helix/UBA	50.00	1.00e-172	605.00	IUUC-Hsa-045869
ULD/UDP/UFD/PB1	50.00	1.00e-172	605.00	IUUC-Hsa-045869
UBD/Alpha-Helix/UBA	48.10	0.00e+00	813.00	IUUC-Mmu-063788
UBD/Alpha-Helix/UBA	47.38	0.00e+00	802.00	IUUC-Rno-105543
UBD/Alpha-Helix/UBA	39.13	3.00e-15	77.80	IUUC-Ots-000010

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MEFQVNLCVN YNGESQNFLV SDSENTTWAD VETMVCVSYD LNGIQIKYID EDNEEVSVNS 60
QGEYEEALKI AVKQGGLLQM NIYDKPGNFE ELNTPLPKSC PALRNGKRPL EHYSILARAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTCC AGGTGAATTT GTGTGTGAAT TATAATGGAG AATCCCAAAA CTTTCTGGTT 60
TCTGACTCTG AAAATACAAC TTGGGCTGAT GTAGAGACAA TGGTAAGTAC TGGTAAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR032350--N_BRCA1_central
IPR033513--NBR1
IPR000270--PB1_dom
IPR015940--UBA
IPR009060--UBA-like
IPR000433--Znf_ZZ

PROSITE

PS51745--PB1
PS50030--UBA
PS01357--ZF_ZZ_1
PS50135--ZF_ZZ_2

Pfam

PF16158--N_BRCA1_IG
PF00564--PB1

SMART

SM00666--PB1
SM00291--ZnF_ZZ

Gene Ontology

GO:0005776--C:autophagosome
GO:0000407--C:pre-autophagosomal structure
GO:0043130--F:ubiquitin binding
GO:0008270--F:zinc ion binding
GO:0016236--P:macroautophagy

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001137	Aegilops tauschii	37.50	4.00e-07	50.40
IUUC-Aml-002028	Ailuropoda melanoleuca	46.75	0.00e+00	761.00
IUUC-Atr-003106	Amborella trichopoda	32.86	1.00e-11	65.10
IUUC-Apl-003851	Anas platyrhynchos	41.59	3.00e-178	619.00
IUUC-Aca-005281	Anolis carolinensis	42.40	7.00e-171	594.00
IUUC-Aly-006000	Arabidopsis lyrata	34.86	3.00e-11	63.90
IUUC-Ath-006835	Arabidopsis thaliana	34.88	8.00e-14	72.00
IUUC-Acl-008033	Aspergillus clavatus	22.66	2.00e-11	64.30
IUUC-Afl-008503	Aspergillus flavus	29.71	1.00e-07	51.60
IUUC-Afu-008992	Aspergillus fumigatus	23.93	9.00e-12	65.90
IUUC-Ani-009220	Aspergillus nidulans	28.33	7.00e-10	59.30
IUUC-Ang-009700	Aspergillus niger	29.31	7.00e-09	55.80
IUUC-Aor-010141	Aspergillus oryzae	29.71	1.00e-07	51.60
IUUC-Ate-010391	Aspergillus terreus	27.41	6.00e-08	53.50
IUUC-Ame-010904	Astyanax mexicanus	39.44	2.00e-114	407.00
IUUC-Bgr-011970	Blumeria graminis	28.46	2.00e-08	54.70
IUUC-Bta-013030	Bos taurus	47.79	0.00e+00	789.00
IUUC-Bci-013961	Botrytis cinerea	28.10	8.00e-09	55.80
IUUC-Bdi-014744	Brachypodium distachyon	40.00	2.00e-16	80.90
IUUC-Bol-015840	Brassica oleracea	36.52	1.00e-13	71.60
IUUC-Bra-017383	Brassica rapa	38.84	1.00e-14	75.10
IUUC-Cja-019576	Callithrix jacchus	46.99	0.00e+00	762.00
IUUC-Cfa-021030	Canis familiaris	47.87	0.00e+00	773.00
IUUC-Cpo-021386	Cavia porcellus	40.06	2.00e-171	596.00
IUUC-Csa-023265	Chlorocebus sabaeus	48.33	0.00e+00	761.00
IUUC-Cho-024901	Choloepus hoffmanni	77.50	2.00e-55	209.00
IUUC-Cin-025291	Ciona intestinalis	29.12	8.00e-12	63.50
IUUC-Csv-026267	Ciona savignyi	26.60	2.00e-09	56.60
IUUC-Cgl-026677	Colletotrichum gloeosporioides	30.33	1.00e-10	61.60
IUUC-Dre-028204	Danio rerio	38.78	2.00e-115	410.00
IUUC-Dno-028885	Dasypus novemcinctus	48.04	0.00e+00	797.00
IUUC-Dor-030521	Dipodomys ordii	29.13	6.00e-08	50.80
IUUC-Dse-031315	Dothistroma septosporum	23.44	4.00e-12	67.00
IUUC-Eca-033409	Equus caballus	47.98	0.00e+00	797.00
IUUC-Fca-035407	Felis catus	47.92	0.00e+00	803.00
IUUC-Fal-037400	Ficedula albicollis	44.03	0.00e+00	670.00
IUUC-Fox-037767	Fusarium oxysporum	29.10	2.00e-09	58.20
IUUC-Fso-038322	Fusarium solani	31.15	2.00e-10	61.20
IUUC-Gmo-039454	Gadus morhua	34.87	2.00e-83	303.00
IUUC-Gga-040430	Gallus gallus	44.69	0.00e+00	695.00
IUUC-Gac-042114	Gasterosteus aculeatus	38.36	9.00e-145	507.00
IUUC-Gma-044280	Glycine max	38.74	2.00e-15	77.80
IUUC-Ggo-045643	Gorilla gorilla	50.15	4.00e-169	588.00
IUUC-Hsa-045869	Homo sapiens	50.00	4.00e-169	588.00
IUUC-Hvu-047467	Hordeum vulgare	39.09	3.00e-16	80.90
IUUC-Itr-048172	Ictidomys tridecemlineatus	48.31	0.00e+00	773.00
IUUC-Lch-050238	Latimeria chalumnae	51.58	1.00e-160	560.00
IUUC-Lpe-051565	Leersia perrieri	40.91	1.00e-16	81.60
IUUC-Loc-052860	Lepisosteus oculatus	37.89	2.00e-155	543.00
IUUC-Lma-053158	Leptosphaeria maculans	28.81	6.00e-09	55.80
IUUC-Laf-054460	Loxodonta africana	47.98	0.00e+00	789.00
IUUC-Mcc-055768	Macaca mulatta	48.68	0.00e+00	764.00
IUUC-Meu-056136	Macropus eugenii	49.35	4.00e-140	491.00
IUUC-Mor-057101	Magnaporthe oryzae	25.36	1.00e-08	55.10
IUUC-Mpo-057563	Magnaporthe poae	27.34	4.00e-07	50.40
IUUC-Mtr-058592	Medicago truncatula	37.82	5.00e-15	76.60
IUUC-Mla-059018	Melampsora laricipopulina	38.78	3.00e-15	72.80
IUUC-Mga-059507	Meleagris gallopavo	46.40	1.00e-150	527.00
IUUC-Mvi-060452	Microbotryum violaceum	35.04	2.00e-12	68.20
IUUC-Mmr-060796	Microcebus murinus	50.22	2.00e-168	585.00
IUUC-Mdo-062214	Monodelphis domestica	48.87	0.00e+00	816.00
IUUC-Mmu-063788	Mus musculus	49.42	9.00e-177	613.00
IUUC-Mac-064456	Musa acuminata	34.64	2.00e-16	81.30
IUUC-Mpu-066809	Mustela putorius furo	47.76	0.00e+00	798.00
IUUC-Mlu-067887	Myotis lucifugus	47.77	0.00e+00	790.00
IUUC-Nfi-068336	Neosartorya fischeri	27.01	1.00e-08	55.10
IUUC-Ncr-068640	Neurospora crassa	29.17	7.00e-08	52.80
IUUC-Nle-069230	Nomascus leucogenys	50.07	8.00e-170	590.00
IUUC-Opr-070848	Ochotona princeps	45.41	1.00e-91	330.00
IUUC-Ont-071913	Oreochromis niloticus	37.97	3.00e-156	545.00
IUUC-Oan-073479	Ornithorhynchus anatinus	39.08	3.00e-93	336.00
IUUC-Ocu-074112	Oryctolagus cuniculus	48.13	0.00e+00	799.00
IUUC-Oba-075551	Oryza barthii	40.91	1.00e-16	82.00
IUUC-Obr-076023	Oryza brachyantha	40.00	1.00e-16	81.60
IUUC-Ogl-076946	Oryza glaberrima	40.91	1.00e-16	82.00
IUUC-Ogu-078367	Oryza glumaepatula	40.91	1.00e-16	82.00
IUUC-Oin-079583	Oryza indica	40.91	1.00e-16	82.00
IUUC-Olo-080331	Oryza longistaminata	40.91	1.00e-16	82.00
IUUC-Ome-081656	Oryza meridionalis	40.91	1.00e-16	82.00
IUUC-Oni-082599	Oryza nivara	40.91	1.00e-16	82.00
IUUC-Opu-083123	Oryza punctata	40.91	5.00e-17	83.20
IUUC-Oru-084697	Oryza rufipogon	40.95	1.00e-14	75.50
IUUC-Osa-085500	Oryza sativa	40.91	1.00e-16	82.00
IUUC-Ola-087486	Oryzias latipes	39.21	2.00e-100	360.00
IUUC-Oga-088832	Otolemur garnettii	47.85	0.00e+00	774.00
IUUC-Oar-090088	Ovis aries	47.71	0.00e+00	790.00
IUUC-Ptr-090790	Pan troglodytes	50.15	7.00e-170	591.00
IUUC-Pan-092523	Papio anubis	48.13	0.00e+00	756.00
IUUC-Psi-093398	Pelodiscus sinensis	46.53	0.00e+00	716.00
IUUC-Pma-094658	Petromyzon marinus	29.32	3.00e-09	55.10
IUUC-Ppa-095602	Physcomitrella patens	44.14	1.00e-17	85.10
IUUC-Pfo-097491	Poecilia formosa	36.62	1.00e-125	444.00
IUUC-Pab-098775	Pongo abelii	47.23	0.00e+00	754.00
IUUC-Pop-099441	Populus trichocarpa	36.17	4.00e-17	83.20
IUUC-Pca-100690	Procavia capensis	46.77	8.00e-100	357.00
IUUC-Ppe-101351	Prunus persica	38.26	2.00e-14	74.30
IUUC-Pva-102582	Pteropus vampyrus	47.34	2.00e-114	405.00
IUUC-Pgr-103390	Puccinia graminis	36.92	2.00e-08	55.50
IUUC-Ptt-103754	Puccinia triticina	34.92	8.00e-11	62.40
IUUC-Rno-105543	Rattus norvegicus	47.28	0.00e+00	747.00
IUUC-Sha-106861	Sarcophilus harrisii	49.17	0.00e+00	808.00
IUUC-Ssl-108620	Sclerotinia sclerotiorum	28.10	1.00e-08	55.50
IUUC-Smo-109175	Selaginella moellendorffii	34.55	1.00e-10	59.30
IUUC-Sit-110140	Setaria italica	40.00	5.00e-16	79.70
IUUC-Sly-111749	Solanum lycopersicum	32.86	8.00e-18	85.50
IUUC-Stu-111924	Solanum tuberosum	35.80	2.00e-18	87.80
IUUC-Sar-113740	Sorex araneus	42.33	7.00e-176	610.00
IUUC-Sbi-114660	Sorghum bicolor	38.74	7.00e-17	82.80
IUUC-Ssc-116108	Sus scrofa	48.35	0.00e+00	816.00
IUUC-Tgu-117185	Taeniopygia guttata	42.81	5.00e-177	614.00
IUUC-Tru-117624	Takifugu rubripes	36.82	3.00e-152	532.00
IUUC-Tsy-119265	Tarsius syrichta	48.87	9.00e-118	416.00
IUUC-Tni-120728	Tetraodon nigroviridis	50.50	2.00e-76	280.00
IUUC-Tca-120994	Theobroma cacao	39.13	3.00e-15	77.00
IUUC-Tre-122001	Trichoderma reesei	29.17	1.00e-07	52.00
IUUC-Tvi-122435	Trichoderma virens	29.17	3.00e-07	50.80
IUUC-Tae-125780	Triticum aestivum	39.09	2.00e-16	80.90
IUUC-Tur-126775	Triticum urartu	39.09	2.00e-16	80.90
IUUC-Tme-127010	Tuber melanosporum	29.09	1.00e-07	52.00
IUUC-Tbe-127236	Tupaia belangeri	48.83	0.00e+00	781.00
IUUC-Ttr-128229	Tursiops truncatus	48.77	1.00e-118	419.00
IUUC-Vpa-130650	Vicugna pacos	45.72	7.00e-59	221.00
IUUC-Vvi-131325	Vitis vinifera	38.94	5.00e-15	76.60
IUUC-Xma-134007	Xiphophorus maculatus	36.29	2.00e-123	437.00
IUUC-Zma-134921	Zea mays	40.16	6.00e-20	92.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence