iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037626

Ensembl Protein ID

ENSFALP00000006957.1

UniProt Accession

U3JW03; U3JW03_FICAL

Genbank Protein ID

ENSFALP00000006957

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01010260

Gene Name

LDB3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000006660.1	ENSFALT00000006986.1	ENSFALP00000006957.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	37.66	2.00e-05	48.50	IUUC-Ath-007530

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MPLTISRITP GSKAAQSQMN QGDLVVAIDG VNTDSMTHLE AQNKIKSASH NLSLTLQKSK 60
RPVPVSTTAP RIDSPRAVIP HQKEPAWEIN GNRTTFSPLT NTATGPMGYL NQQEISLSNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG 60
GGGGGGGGGG GGCCGCTCGG CCCGGAGGTG CCGGTGAGCG AGGCGCTGCG AGCGGGCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR031847--DUF4749
IPR001478--PDZ
IPR006643--Zasp-like_motif
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50106--PDZ

Pfam

PF15936--DUF4749
PF00412--LIM
PF00595--PDZ

SMART

SM00132--LIM
SM00228--PDZ
SM00735--ZM

Gene Ontology

GO:0005856--C:cytoskeleton
GO:0030018--C:Z disc
GO:0008270--F:zinc ion binding
GO:0045214--P:sarcomere organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000888	Aegilops tauschii	38.96	2.00e-07	50.10
IUUC-Aml-001484	Ailuropoda melanoleuca	32.35	5.00e-07	48.50
IUUC-Atr-002465	Amborella trichopoda	35.06	3.00e-08	53.10
IUUC-Aca-004512	Anolis carolinensis	43.33	8.00e-10	57.80
IUUC-Aly-005589	Arabidopsis lyrata	34.07	2.00e-07	50.80
IUUC-Ath-007530	Arabidopsis thaliana	34.07	5.00e-07	49.30
IUUC-Ame-011762	Astyanax mexicanus	28.14	7.00e-24	105.00
IUUC-Bta-012510	Bos taurus	33.33	4.00e-06	45.40
IUUC-Bdi-014217	Brachypodium distachyon	38.96	3.00e-07	49.70
IUUC-Bol-015361	Brassica oleracea	34.31	1.00e-07	50.80
IUUC-Bra-016788	Brassica rapa	32.43	1.60e-02	33.50
IUUC-Cja-019248	Callithrix jacchus	33.82	2.00e-07	50.10
IUUC-Cfa-020352	Canis familiaris	33.82	4.00e-07	48.90
IUUC-Cpo-021667	Cavia porcellus	82.90	2.00e-132	466.00
IUUC-Csa-024190	Chlorocebus sabaeus	32.35	5.00e-07	48.50
IUUC-Dre-027455	Danio rerio	28.14	2.00e-23	104.00
IUUC-Dse-031181	Dothistroma septosporum	31.01	2.00e-16	81.30
IUUC-Dme-031605	Drosophila melanogaster	29.80	3.00e-23	104.00
IUUC-Eca-034183	Equus caballus	33.82	1.00e-07	50.10
IUUC-Eeu-034958	Erinaceus europaeus	34.78	1.00e-08	53.10
IUUC-Fca-035680	Felis catus	35.29	4.00e-08	52.00
IUUC-Gmo-038558	Gadus morhua	41.82	4.00e-09	55.10
IUUC-Gga-040724	Gallus gallus	29.65	5.00e-24	106.00
IUUC-Gac-041738	Gasterosteus aculeatus	40.00	5.00e-09	54.70
IUUC-Gma-042981	Glycine max	40.79	4.00e-08	52.80
IUUC-Ggo-044609	Gorilla gorilla	32.35	6.00e-07	48.10
IUUC-Hsa-045868	Homo sapiens	32.35	4.00e-07	49.70
IUUC-Hvu-047787	Hordeum vulgare	33.78	7.00e-07	48.90
IUUC-Itr-048876	Ictidomys tridecemlineatus	32.35	3.00e-07	49.30
IUUC-Lpe-050858	Leersia perrieri	38.96	2.00e-07	50.10
IUUC-Loc-052468	Lepisosteus oculatus	29.35	2.00e-23	104.00
IUUC-Laf-053824	Loxodonta africana	33.82	2.00e-07	49.70
IUUC-Mcc-054962	Macaca mulatta	32.35	5.00e-07	48.50
IUUC-Meu-056007	Macropus eugenii	44.64	3.00e-08	53.10
IUUC-Mtr-058103	Medicago truncatula	36.36	8.00e-07	48.10
IUUC-Mla-059141	Melampsora laricipopulina	27.98	2.00e-23	103.00
IUUC-Mmr-060595	Microcebus murinus	83.21	2.00e-140	492.00
IUUC-Mdo-062935	Monodelphis domestica	33.33	2.00e-06	46.20
IUUC-Mmu-063244	Mus musculus	33.82	7.00e-08	51.20
IUUC-Mac-065516	Musa acuminata	41.86	1.00e-03	35.40
IUUC-Mpu-065888	Mustela putorius furo	35.56	2.00e-05	42.70
IUUC-Mlu-067124	Myotis lucifugus	33.82	2.00e-07	50.10
IUUC-Ncr-068674	Neurospora crassa	29.06	8.00e-14	72.40
IUUC-Nle-069063	Nomascus leucogenys	32.35	6.00e-07	47.80
IUUC-Opr-071221	Ochotona princeps	41.67	7.00e-09	55.10
IUUC-Ont-072000	Oreochromis niloticus	36.67	3.00e-08	52.40
IUUC-Oan-073012	Ornithorhynchus anatinus	36.11	7.00e-03	34.70
IUUC-Ocu-074376	Oryctolagus cuniculus	35.59	4.00e-07	48.50
IUUC-Oba-075638	Oryza barthii	36.00	1.00e-07	50.80
IUUC-Obr-076433	Oryza brachyantha	38.96	2.00e-07	50.10
IUUC-Ogl-077659	Oryza glaberrima	36.00	1.00e-07	51.20
IUUC-Ogu-078868	Oryza glumaepatula	38.96	2.00e-07	50.10
IUUC-Oin-079737	Oryza indica	38.96	1.00e-07	51.60
IUUC-Olo-080337	Oryza longistaminata	38.96	2.00e-07	51.20
IUUC-Oni-082197	Oryza nivara	38.96	2.00e-07	50.10
IUUC-Opu-083412	Oryza punctata	36.00	9.00e-08	52.00
IUUC-Oru-085246	Oryza rufipogon	38.96	2.00e-07	50.10
IUUC-Osa-085312	Oryza sativa	36.00	1.00e-07	51.20
IUUC-Ola-087406	Oryzias latipes	29.69	6.00e-18	85.90
IUUC-Olu-087728	Ostreococcus lucimarinus	25.00	3.00e-01	29.60
IUUC-Oga-088393	Otolemur garnettii	38.98	2.00e-08	52.80
IUUC-Oar-089421	Ovis aries	33.33	5.00e-06	45.10
IUUC-Ptr-091089	Pan troglodytes	32.35	6.00e-07	48.10
IUUC-Pan-092163	Papio anubis	32.35	4.00e-07	48.50
IUUC-Psi-093043	Pelodiscus sinensis	32.63	7.00e-08	51.20
IUUC-Pno-094933	Phaeosphaeria nodorum	30.83	1.00e-14	74.70
IUUC-Ppa-096027	Physcomitrella patens	33.33	2.00e-07	50.40
IUUC-Pfo-097294	Poecilia formosa	72.53	8.00e-121	427.00
IUUC-Pab-098372	Pongo abelii	29.15	5.00e-23	102.00
IUUC-Pop-098996	Populus trichocarpa	36.36	2.00e-07	50.40
IUUC-Pca-100131	Procavia capensis	33.82	2.00e-07	50.80
IUUC-Pva-102706	Pteropus vampyrus	33.82	1.00e-07	51.20
IUUC-Ptt-104003	Puccinia triticina	26.72	4.00e-05	42.70
IUUC-Pte-104256	Pyrenophora teres	27.50	5.00e-13	69.30
IUUC-Pyt-104720	Pyrenophora triticirepentis	27.27	2.00e-12	66.20
IUUC-Rno-104992	Rattus norvegicus	36.51	7.00e-08	51.20
IUUC-Sha-107463	Sarcophilus harrisii	43.33	6.00e-09	54.30
IUUC-Smo-108841	Selaginella moellendorffii	33.33	2.00e-06	46.60
IUUC-Sit-110147	Setaria italica	37.66	6.00e-07	48.90
IUUC-Sly-111689	Solanum lycopersicum	26.38	3.00e-08	53.10
IUUC-Stu-112186	Solanum tuberosum	26.38	3.00e-08	53.10
IUUC-Sar-113038	Sorex araneus	62.07	2.00e-86	313.00
IUUC-Sbi-114441	Sorghum bicolor	38.96	4.00e-08	52.40
IUUC-Sre-115199	Sporisorium reilianum	27.67	9.00e-22	99.00
IUUC-Ssc-116398	Sus scrofa	29.15	4.00e-23	103.00
IUUC-Tgu-116824	Taeniopygia guttata	81.37	0.00e+00	793.00
IUUC-Tca-121863	Theobroma cacao	30.77	2.00e-06	47.40
IUUC-Tae-125394	Triticum aestivum	33.78	2.00e-07	50.10
IUUC-Tur-126006	Triticum urartu	38.96	2.00e-07	50.10
IUUC-Tbe-127395	Tupaia belangeri	80.89	2.00e-113	402.00
IUUC-Uma-129653	Ustilago maydis	29.61	5.00e-23	103.00
IUUC-Vpa-130784	Vicugna pacos	82.61	2.00e-113	402.00
IUUC-Vvi-131286	Vitis vinifera	36.99	2.00e-08	53.10
IUUC-Xma-134125	Xiphophorus maculatus	74.24	4.00e-119	421.00
IUUC-Zma-135630	Zea mays	37.66	5.00e-07	48.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence