iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-021678

Ensembl Protein ID

ENSCPOP00000009373.2

UniProt Accession

H0VGW3; H0VGW3_CAVPO

Genbank Protein ID

ENSCPOP00000009373

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02010788

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000010437.3	ENSCPOT00000010531.2	ENSCPOP00000009373.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.40e-08	33.8	195	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++++ +qaL +++nnleaA++ Ll+
   Q: 195  DEKALKHITEMGFSKDASRQALMDNGNNLEAALNVLLN 232
           78999*******************************97 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MLRLQMTDGH ISCTAVEFSY MSKISLNTPP GTKVKLSGNV DIKNGFLLLN DSNTTVLGGE 60
VEHLVEKWEL QRSLSKHSRS NIGTEGGPPP FVPFGQTCIL SLLVDQDLMD RCRKISLTIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCGTT TGCAGATGAC TGATGGTCAT ATCAGTTGCA CAGCAGTAGA ATTTAGTTAT 60
ATGTCAAAAA TAAGGTGATT GGTTCTTTAC TATACATATT TTTTAAAAGA CTATTTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	34.74	7.00e-13	68.20
IUUC-Aml-001751	Ailuropoda melanoleuca	83.09	0.00e+00	969.00
IUUC-Atr-002788	Amborella trichopoda	36.84	4.00e-14	72.40
IUUC-Apl-004055	Anas platyrhynchos	66.99	0.00e+00	743.00
IUUC-Aca-004367	Anolis carolinensis	63.01	0.00e+00	724.00
IUUC-Aly-006072	Arabidopsis lyrata	38.04	6.00e-15	75.10
IUUC-Ath-007491	Arabidopsis thaliana	36.96	2.00e-14	73.60
IUUC-Ame-011439	Astyanax mexicanus	51.56	9.00e-70	258.00
IUUC-Bta-012894	Bos taurus	81.40	0.00e+00	957.00
IUUC-Bdi-014462	Brachypodium distachyon	35.42	8.00e-14	71.20
IUUC-Bol-015343	Brassica oleracea	40.21	9.00e-15	74.70
IUUC-Bra-016787	Brassica rapa	39.18	1.00e-14	73.90
IUUC-Cel-018154	Caenorhabditis elegans	36.73	9.00e-17	81.60
IUUC-Cja-019364	Callithrix jacchus	82.87	0.00e+00	973.00
IUUC-Cfa-021166	Canis familiaris	81.17	0.00e+00	929.00
IUUC-Csa-023299	Chlorocebus sabaeus	81.89	0.00e+00	996.00
IUUC-Cho-024694	Choloepus hoffmanni	82.99	5.00e-121	428.00
IUUC-Cin-025191	Ciona intestinalis	44.79	1.00e-20	92.80
IUUC-Csv-026348	Ciona savignyi	52.94	1.00e-12	64.30
IUUC-Dre-028715	Danio rerio	39.56	1.00e-98	353.00
IUUC-Dno-030091	Dasypus novemcinctus	80.39	0.00e+00	967.00
IUUC-Dor-030807	Dipodomys ordii	70.47	0.00e+00	791.00
IUUC-Dme-031770	Drosophila melanogaster	27.24	9.00e-17	82.40
IUUC-Ete-032507	Echinops telfairi	65.32	0.00e+00	650.00
IUUC-Eca-033406	Equus caballus	81.51	0.00e+00	917.00
IUUC-Eeu-034600	Erinaceus europaeus	76.84	0.00e+00	845.00
IUUC-Fca-035916	Felis catus	82.38	0.00e+00	961.00
IUUC-Fal-036658	Ficedula albicollis	65.20	0.00e+00	706.00
IUUC-Gmo-038974	Gadus morhua	46.23	1.00e-58	221.00
IUUC-Gga-040195	Gallus gallus	66.50	0.00e+00	777.00
IUUC-Gac-042537	Gasterosteus aculeatus	40.33	4.00e-94	339.00
IUUC-Gma-044234	Glycine max	44.44	3.00e-18	86.30
IUUC-Ggo-044715	Gorilla gorilla	81.95	0.00e+00	995.00
IUUC-Hsa-045814	Homo sapiens	83.20	0.00e+00	1006.00
IUUC-Hvu-047365	Hordeum vulgare	35.42	7.00e-13	68.60
IUUC-Itr-047866	Ictidomys tridecemlineatus	81.89	0.00e+00	976.00
IUUC-Lch-050393	Latimeria chalumnae	53.78	3.00e-155	542.00
IUUC-Lpe-050691	Leersia perrieri	35.42	2.00e-14	73.90
IUUC-Loc-052859	Lepisosteus oculatus	49.68	7.00e-128	451.00
IUUC-Laf-053953	Loxodonta africana	84.19	0.00e+00	729.00
IUUC-Mcc-055846	Macaca mulatta	81.73	0.00e+00	994.00
IUUC-Meu-056790	Macropus eugenii	62.21	0.00e+00	681.00
IUUC-Mor-056988	Magnaporthe oryzae	33.33	8.40e+00	25.80
IUUC-Mtr-058749	Medicago truncatula	42.86	1.00e-15	77.40
IUUC-Mla-058959	Melampsora laricipopulina	40.00	1.00e-06	47.00
IUUC-Mga-059656	Meleagris gallopavo	66.50	0.00e+00	706.00
IUUC-Mmr-061089	Microcebus murinus	83.52	0.00e+00	981.00
IUUC-Mdo-063043	Monodelphis domestica	62.44	0.00e+00	662.00
IUUC-Mmu-063654	Mus musculus	75.86	0.00e+00	833.00
IUUC-Mac-064947	Musa acuminata	41.84	5.00e-11	62.00
IUUC-Mpu-066115	Mustela putorius furo	82.71	0.00e+00	939.00
IUUC-Mlu-066974	Myotis lucifugus	81.40	0.00e+00	978.00
IUUC-Nle-069184	Nomascus leucogenys	82.38	0.00e+00	998.00
IUUC-Opr-070770	Ochotona princeps	70.96	0.00e+00	841.00
IUUC-Ont-072040	Oreochromis niloticus	50.28	8.00e-84	305.00
IUUC-Oan-073448	Ornithorhynchus anatinus	68.48	3.00e-47	181.00
IUUC-Ocu-074405	Oryctolagus cuniculus	82.06	0.00e+00	957.00
IUUC-Oba-075977	Oryza barthii	35.42	1.00e-08	53.90
IUUC-Obr-076298	Oryza brachyantha	37.50	3.00e-14	73.20
IUUC-Ogl-077706	Oryza glaberrima	36.46	1.00e-08	54.30
IUUC-Ogu-078381	Oryza glumaepatula	35.42	4.00e-09	55.50
IUUC-Oin-080150	Oryza indica	36.46	1.00e-08	54.30
IUUC-Ome-081153	Oryza meridionalis	34.38	3.00e-08	52.80
IUUC-Oni-083115	Oryza nivara	35.42	1.00e-08	53.90
IUUC-Opu-083860	Oryza punctata	34.38	5.00e-13	68.90
IUUC-Oru-084859	Oryza rufipogon	36.46	1.00e-08	53.90
IUUC-Osa-085567	Oryza sativa	36.46	5.00e-07	48.90
IUUC-Ola-087049	Oryzias latipes	38.22	1.00e-97	350.00
IUUC-Oga-088455	Otolemur garnettii	81.57	0.00e+00	977.00
IUUC-Oar-090096	Ovis aries	81.24	0.00e+00	960.00
IUUC-Ptr-090974	Pan troglodytes	82.54	0.00e+00	998.00
IUUC-Pan-092657	Papio anubis	81.73	0.00e+00	994.00
IUUC-Psi-093113	Pelodiscus sinensis	68.69	0.00e+00	813.00
IUUC-Ppa-095466	Physcomitrella patens	42.39	4.00e-16	79.30
IUUC-Pfo-096631	Poecilia formosa	49.58	3.00e-80	293.00
IUUC-Pab-098070	Pongo abelii	83.20	0.00e+00	1009.00
IUUC-Pop-099235	Populus trichocarpa	38.54	1.00e-14	74.70
IUUC-Pca-101032	Procavia capensis	73.74	0.00e+00	862.00
IUUC-Ppe-101793	Prunus persica	40.62	2.00e-16	80.50
IUUC-Pva-102290	Pteropus vampyrus	80.10	0.00e+00	955.00
IUUC-Rno-105080	Rattus norvegicus	76.02	0.00e+00	815.00
IUUC-Sha-107598	Sarcophilus harrisii	68.99	0.00e+00	781.00
IUUC-Sit-110735	Setaria italica	37.50	3.00e-14	73.20
IUUC-Sly-111126	Solanum lycopersicum	41.94	5.00e-15	75.50
IUUC-Stu-112780	Solanum tuberosum	41.05	3.00e-17	82.80
IUUC-Sar-113418	Sorex araneus	79.97	0.00e+00	917.00
IUUC-Sbi-113925	Sorghum bicolor	37.50	7.00e-14	71.60
IUUC-Sre-114917	Sporisorium reilianum	36.59	2.00e-06	46.60
IUUC-Ssc-115712	Sus scrofa	81.92	0.00e+00	963.00
IUUC-Tgu-117148	Taeniopygia guttata	66.72	0.00e+00	754.00
IUUC-Tru-117831	Takifugu rubripes	52.26	3.00e-79	289.00
IUUC-Tsy-118917	Tarsius syrichta	80.42	0.00e+00	919.00
IUUC-Tni-120783	Tetraodon nigroviridis	49.15	1.00e-76	281.00
IUUC-Tca-121430	Theobroma cacao	45.31	5.00e-07	48.90
IUUC-Tae-123752	Triticum aestivum	34.74	7.00e-13	68.60
IUUC-Tur-126238	Triticum urartu	35.42	1.00e-12	67.40
IUUC-Ttr-128615	Tursiops truncatus	76.35	0.00e+00	882.00
IUUC-Vpa-130531	Vicugna pacos	82.71	0.00e+00	982.00
IUUC-Vvi-131607	Vitis vinifera	45.05	2.00e-14	73.20
IUUC-Xtr-132787	Xenopus tropicalis	53.25	8.00e-163	567.00
IUUC-Xma-133815	Xiphophorus maculatus	39.87	3.00e-99	356.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence