iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074141

Ensembl Protein ID

ENSOCUP00000004455.2

UniProt Accession

B7NZD2; B7NZD2_RABIT

Genbank Protein ID

ACJ74015.1

Protein Name

Proteasome 26S subunit, non-ATPase, 4 (Predicted)

Genbank Nucleotide ID

AAGW02000577

Gene Name

PSMD4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000005143.3	ENSOCUT00000005143.3	ENSOCUP00000004455.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	42.78	4.00e-66	248.00	IUUC-Ath-007436
UBD/Alpha-Helix/UIM	57.92	6.00e-105	377.00	IUUC-Dme-032000
UBD/Alpha-Helix/UIM	50.00	7.00e-54	206.00	IUUC-Sce-106427
UBD/Alpha-Helix/UIM	47.35	2.00e-54	207.00	IUUC-Spo-108378

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MVLESTMVCV DNSEYMRNGD FLPTRLQAQQ DAVNIVCHSK TRSNPENNVG LITLANDCEV 60
LTTLTPDTGR ILSKLHTVQP KGKITFCTGI RVAHLALKHR QGKNHKMRII AFVGSPVEDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTATTTT GGCTGCGCCT ACAACTCCCA GAAGGCAATG GGGGTTGGAG GCGGAACTAG 60
CTCGAAGCGC CGAGATCTGT GATTGGTGAC GAGCGTAGGT CCAATTGGAG GAGCTGTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0647--Proteasome
KW-1185--Reference proteome

Interpro

IPR027040--Proteasome_su_Rpn10
IPR003903--UIM_dom
IPR002035--VWF_A

PROSITE

PS50330--UIM
PS50234--VWFA

Pfam

PF02809--UIM
PF13519--VWA_2

SMART

SM00726--UIM
SM00327--VWA

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0008540--C:proteasome regulatory particle, base subcomplex
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ocu:100328669

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001241	Ailuropoda melanoleuca	96.72	0.00e+00	632.00
IUUC-Atr-002938	Amborella trichopoda	43.17	3.00e-65	241.00
IUUC-Apl-003881	Anas platyrhynchos	97.13	3.00e-110	390.00
IUUC-Aca-004397	Anolis carolinensis	96.08	2.00e-121	427.00
IUUC-Aly-005564	Arabidopsis lyrata	41.34	1.00e-55	209.00
IUUC-Ath-007436	Arabidopsis thaliana	41.09	6.00e-55	207.00
IUUC-Ago-007858	Ashbya gossypii	51.30	1.00e-58	219.00
IUUC-Acl-008094	Aspergillus clavatus	45.45	1.00e-38	152.00
IUUC-Afl-008689	Aspergillus flavus	46.75	5.00e-39	154.00
IUUC-Afu-008959	Aspergillus fumigatus	46.29	8.00e-39	153.00
IUUC-Ani-009344	Aspergillus nidulans	43.01	1.00e-23	102.00
IUUC-Ang-009602	Aspergillus niger	45.45	2.00e-37	148.00
IUUC-Aor-009906	Aspergillus oryzae	44.74	1.00e-24	106.00
IUUC-Ate-010267	Aspergillus terreus	44.50	2.00e-30	125.00
IUUC-Ame-011018	Astyanax mexicanus	87.16	6.00e-174	603.00
IUUC-Bgr-012200	Blumeria graminis	50.00	4.00e-49	188.00
IUUC-Bta-013066	Bos taurus	97.55	7.00e-180	622.00
IUUC-Bci-013904	Botrytis cinerea	51.90	1.00e-49	189.00
IUUC-Bdi-014537	Brachypodium distachyon	49.58	5.00e-53	201.00
IUUC-Bol-015474	Brassica oleracea	50.42	2.00e-52	199.00
IUUC-Bra-018039	Brassica rapa	50.42	8.00e-53	200.00
IUUC-Cel-018187	Caenorhabditis elegans	55.02	1.00e-63	236.00
IUUC-Cja-019738	Callithrix jacchus	98.64	0.00e+00	638.00
IUUC-Cfa-020362	Canis familiaris	96.99	0.00e+00	634.00
IUUC-Cpo-021297	Cavia porcellus	97.49	6.00e-174	604.00
IUUC-Cre-022783	Chlamydomonas reinhardtii	49.58	4.00e-46	177.00
IUUC-Cho-024800	Choloepus hoffmanni	97.25	1.00e-56	213.00
IUUC-Cin-025469	Ciona intestinalis	55.71	3.00e-91	328.00
IUUC-Csv-026297	Ciona savignyi	57.02	1.00e-102	366.00
IUUC-Cgl-026657	Colletotrichum gloeosporioides	48.95	2.00e-39	155.00
IUUC-Cne-027027	Cryptococcus neoformans	47.14	3.00e-49	188.00
IUUC-Cme-027212	Cyanidioschyzon merolae	41.03	6.00e-47	181.00
IUUC-Dre-027759	Danio rerio	86.07	1.00e-171	595.00
IUUC-Dno-029528	Dasypus novemcinctus	98.91	0.00e+00	638.00
IUUC-Dor-030255	Dipodomys ordii	98.04	1.00e-177	615.00
IUUC-Dse-031464	Dothistroma septosporum	49.79	1.00e-53	202.00
IUUC-Dme-032000	Drosophila melanogaster	68.44	1.00e-87	316.00
IUUC-Ete-032762	Echinops telfairi	98.09	0.00e+00	639.00
IUUC-Eca-034399	Equus caballus	96.44	0.00e+00	630.00
IUUC-Eeu-035072	Erinaceus europaeus	97.75	2.00e-147	515.00
IUUC-Fca-035993	Felis catus	98.04	1.00e-176	612.00
IUUC-Fal-037623	Ficedula albicollis	65.56	3.00e-120	424.00
IUUC-Fox-037746	Fusarium oxysporum	47.03	2.00e-49	189.00
IUUC-Fso-038431	Fusarium solani	49.15	3.00e-50	192.00
IUUC-Gmo-039290	Gadus morhua	82.47	1.00e-143	502.00
IUUC-Ggr-039821	Gaeumannomyces graminis	48.70	3.00e-41	162.00
IUUC-Gga-040288	Gallus gallus	93.73	1.00e-173	602.00
IUUC-Gac-042587	Gasterosteus aculeatus	83.98	3.00e-164	572.00
IUUC-Gma-043225	Glycine max	51.90	9.00e-62	230.00
IUUC-Ggo-044628	Gorilla gorilla	98.64	0.00e+00	638.00
IUUC-Hsa-045850	Homo sapiens	97.82	0.00e+00	647.00
IUUC-Hvu-047715	Hordeum vulgare	49.58	2.00e-52	199.00
IUUC-Itr-048388	Ictidomys tridecemlineatus	97.51	2.00e-179	621.00
IUUC-Kpa-049158	Komagataella pastoris	54.79	3.00e-56	211.00
IUUC-Lch-050472	Latimeria chalumnae	91.04	2.00e-165	575.00
IUUC-Lpe-051233	Leersia perrieri	48.73	3.00e-49	190.00
IUUC-Loc-052437	Lepisosteus oculatus	76.21	2.00e-90	327.00
IUUC-Lma-053295	Leptosphaeria maculans	52.50	3.00e-48	185.00
IUUC-Laf-053504	Loxodonta africana	98.09	0.00e+00	637.00
IUUC-Mcc-054877	Macaca mulatta	98.64	0.00e+00	637.00
IUUC-Meu-056114	Macropus eugenii	97.28	0.00e+00	644.00
IUUC-Mor-057212	Magnaporthe oryzae	45.99	4.00e-44	171.00
IUUC-Mpo-057587	Magnaporthe poae	49.74	3.00e-42	165.00
IUUC-Mtr-058520	Medicago truncatula	40.26	2.00e-56	213.00
IUUC-Mla-059105	Melampsora laricipopulina	41.84	5.00e-19	88.20
IUUC-Mga-059537	Meleagris gallopavo	93.19	4.00e-179	620.00
IUUC-Mvi-060277	Microbotryum violaceum	37.15	2.00e-39	156.00
IUUC-Mmr-061736	Microcebus murinus	97.82	1.00e-177	615.00
IUUC-Mdo-062403	Monodelphis domestica	96.92	9.00e-179	620.00
IUUC-Mmu-063937	Mus musculus	95.64	1.00e-174	605.00
IUUC-Mac-065456	Musa acuminata	40.10	5.00e-59	221.00
IUUC-Mpu-065901	Mustela putorius furo	96.72	0.00e+00	633.00
IUUC-Mlu-067994	Myotis lucifugus	97.28	0.00e+00	644.00
IUUC-Nfi-068540	Neosartorya fischeri	46.29	8.00e-39	153.00
IUUC-Ncr-068760	Neurospora crassa	49.58	8.00e-53	200.00
IUUC-Nle-069463	Nomascus leucogenys	98.64	0.00e+00	638.00
IUUC-Opr-070298	Ochotona princeps	99.46	0.00e+00	640.00
IUUC-Ont-072615	Oreochromis niloticus	87.67	6.00e-175	606.00
IUUC-Oba-075955	Oryza barthii	48.73	7.00e-50	191.00
IUUC-Obr-076545	Oryza brachyantha	48.31	2.00e-48	186.00
IUUC-Ogl-077252	Oryza glaberrima	48.31	1.00e-47	184.00
IUUC-Ogu-078986	Oryza glumaepatula	48.73	1.00e-49	190.00
IUUC-Oin-080166	Oryza indica	47.64	7.00e-48	185.00
IUUC-Olo-080390	Oryza longistaminata	48.05	1.00e-46	182.00
IUUC-Ome-082015	Oryza meridionalis	48.73	5.00e-50	191.00
IUUC-Oni-082397	Oryza nivara	48.73	6.00e-50	191.00
IUUC-Opu-083674	Oryza punctata	48.73	5.00e-50	191.00
IUUC-Oru-085199	Oryza rufipogon	48.73	6.00e-50	191.00
IUUC-Osa-085911	Oryza sativa	48.73	6.00e-50	191.00
IUUC-Ola-087383	Oryzias latipes	86.87	3.00e-168	585.00
IUUC-Olu-087857	Ostreococcus lucimarinus	48.42	1.00e-45	176.00
IUUC-Oga-088882	Otolemur garnettii	96.65	1.00e-177	615.00
IUUC-Oar-089311	Ovis aries	97.28	2.00e-179	621.00
IUUC-Ptr-090931	Pan troglodytes	97.82	0.00e+00	647.00
IUUC-Pan-092286	Papio anubis	97.82	0.00e+00	647.00
IUUC-Psi-093908	Pelodiscus sinensis	92.82	5.00e-168	583.00
IUUC-Pma-094737	Petromyzon marinus	78.82	2.00e-141	494.00
IUUC-Pno-094807	Phaeosphaeria nodorum	52.10	4.00e-54	204.00
IUUC-Ppa-095749	Physcomitrella patens	48.35	1.00e-52	199.00
IUUC-Pfo-097212	Poecilia formosa	86.03	2.00e-171	595.00
IUUC-Pab-097708	Pongo abelii	97.77	0.00e+00	628.00
IUUC-Pop-099138	Populus trichocarpa	42.97	2.00e-64	239.00
IUUC-Pca-100722	Procavia capensis	100.00	2.00e-63	236.00
IUUC-Ppe-101877	Prunus persica	40.81	6.00e-71	261.00
IUUC-Pva-103185	Pteropus vampyrus	97.82	0.00e+00	636.00
IUUC-Pgr-103361	Puccinia graminis	39.83	3.00e-31	129.00
IUUC-Ptt-103848	Puccinia triticina	35.54	6.00e-15	74.30
IUUC-Pte-104114	Pyrenophora teres	50.43	3.00e-49	188.00
IUUC-Pyt-104662	Pyrenophora triticirepentis	51.05	1.00e-52	199.00
IUUC-Rno-104906	Rattus norvegicus	98.09	0.00e+00	654.00
IUUC-Sce-106427	Saccharomyces cerevisiae	48.73	2.00e-55	208.00
IUUC-Sha-106574	Sarcophilus harrisii	95.39	0.00e+00	627.00
IUUC-Sja-107706	Schizosaccharomyces japonicus	48.85	4.00e-49	187.00
IUUC-Spo-108378	Schizosaccharomyces pombe	46.51	2.00e-51	195.00
IUUC-Smo-109639	Selaginella moellendorffii	39.70	6.00e-58	218.00
IUUC-Sit-110284	Setaria italica	50.85	6.00e-50	191.00
IUUC-Sly-111246	Solanum lycopersicum	37.93	4.00e-61	228.00
IUUC-Stu-112695	Solanum tuberosum	37.93	2.00e-61	229.00
IUUC-Sar-113015	Sorex araneus	98.81	4.00e-98	350.00
IUUC-Sbi-114495	Sorghum bicolor	50.85	4.00e-50	191.00
IUUC-Sre-114891	Sporisorium reilianum	53.88	1.00e-58	219.00
IUUC-Ssc-116142	Sus scrofa	97.55	0.00e+00	645.00
IUUC-Tgu-116946	Taeniopygia guttata	89.68	2.00e-127	447.00
IUUC-Tru-118485	Takifugu rubripes	87.08	4.00e-168	585.00
IUUC-Tsy-119004	Tarsius syrichta	96.14	1.00e-149	522.00
IUUC-Tni-120074	Tetraodon nigroviridis	87.95	2.00e-174	604.00
IUUC-Tca-121251	Theobroma cacao	41.06	3.00e-55	208.00
IUUC-Tre-122168	Trichoderma reesei	49.79	7.00e-54	203.00
IUUC-Tvi-122655	Trichoderma virens	49.36	4.00e-50	191.00
IUUC-Tae-124568	Triticum aestivum	49.58	3.00e-52	198.00
IUUC-Tur-126420	Triticum urartu	49.58	4.00e-52	198.00
IUUC-Tme-126937	Tuber melanosporum	54.01	3.00e-55	208.00
IUUC-Tbe-128080	Tupaia belangeri	97.55	0.00e+00	627.00
IUUC-Ttr-128811	Tursiops truncatus	98.64	0.00e+00	638.00
IUUC-Uma-129436	Ustilago maydis	54.31	1.00e-59	223.00
IUUC-Vda-129920	Verticillium dahliae	48.35	4.00e-43	168.00
IUUC-Vpa-130762	Vicugna pacos	100.00	2.00e-65	242.00
IUUC-Vvi-130840	Vitis vinifera	50.21	1.00e-55	210.00
IUUC-Xtr-131967	Xenopus tropicalis	90.07	4.00e-116	410.00
IUUC-Xma-134224	Xiphophorus maculatus	85.48	2.00e-169	588.00
IUUC-Yli-134643	Yarrowia lipolytica	54.04	1.00e-53	202.00
IUUC-Zma-135870	Zea mays	41.58	1.00e-55	210.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence