iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	28.45	3.00e-35	148.00	IUUC-Hsa-046452
E3 adaptor/Cullin RING/SCF/F-box	23.51	2.00e-21	99.00	IUUC-Sce-106382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD 60
FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS SSPSSSKRKK LTDKTHSGAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTGCTCTC CTTTTTTTTT AAACTCAACC ATACACAAAA AAAGCGACCT CATCTTACCC 60
ACCGATCCGC CATTACAGAC GAAGAAGAAT TTCAACTGCA ATCTCTCTCT GAACCATGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF12937--F-box-like
PF13516--LRR_6

SMART

SM00256--FBOX
SM00367--LRR_CC

KEGG

ath:AT4G15475

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001591	Ailuropoda melanoleuca	28.16	1.00e-36	146.00
IUUC-Atr-002749	Amborella trichopoda	60.93	0.00e+00	724.00
IUUC-Apl-004140	Anas platyrhynchos	30.46	3.00e-37	149.00
IUUC-Aca-004693	Anolis carolinensis	29.97	3.00e-33	135.00
IUUC-Aly-006077	Arabidopsis lyrata	94.92	0.00e+00	1069.00
IUUC-Ago-007921	Ashbya gossypii	24.70	4.00e-25	110.00
IUUC-Acl-008301	Aspergillus clavatus	27.04	2.00e-32	133.00
IUUC-Afl-008738	Aspergillus flavus	27.16	1.00e-31	130.00
IUUC-Afu-009085	Aspergillus fumigatus	27.07	1.00e-33	137.00
IUUC-Ani-009369	Aspergillus nidulans	29.82	6.00e-35	141.00
IUUC-Aor-009957	Aspergillus oryzae	27.00	1.00e-31	130.00
IUUC-Ate-010490	Aspergillus terreus	28.91	9.00e-32	130.00
IUUC-Ame-011331	Astyanax mexicanus	26.69	2.00e-34	139.00
IUUC-Bgr-011980	Blumeria graminis	28.63	7.00e-27	114.00
IUUC-Bta-013330	Bos taurus	27.87	3.00e-30	125.00
IUUC-Bci-013599	Botrytis cinerea	23.55	4.00e-27	115.00
IUUC-Bdi-015021	Brachypodium distachyon	49.16	1.00e-155	543.00
IUUC-Bol-016227	Brassica oleracea	81.20	0.00e+00	978.00
IUUC-Bra-017138	Brassica rapa	78.50	0.00e+00	955.00
IUUC-Cja-019372	Callithrix jacchus	28.94	2.00e-36	145.00
IUUC-Cfa-020668	Canis familiaris	29.60	2.00e-37	149.00
IUUC-Cpo-021658	Cavia porcellus	27.59	4.00e-34	138.00
IUUC-Cre-022929	Chlamydomonas reinhardtii	29.76	2.00e-11	62.80
IUUC-Csa-023598	Chlorocebus sabaeus	28.16	1.00e-36	147.00
IUUC-Cho-024787	Choloepus hoffmanni	30.64	1.00e-36	147.00
IUUC-Cgl-026645	Colletotrichum gloeosporioides	27.24	1.00e-28	120.00
IUUC-Cne-027024	Cryptococcus neoformans	25.48	2.00e-21	97.10
IUUC-Dre-027642	Danio rerio	31.13	2.00e-36	146.00
IUUC-Dno-030049	Dasypus novemcinctus	31.67	1.00e-37	149.00
IUUC-Dor-030749	Dipodomys ordii	26.82	1.00e-19	90.10
IUUC-Dse-031403	Dothistroma septosporum	27.19	2.00e-30	127.00
IUUC-Dme-032125	Drosophila melanogaster	27.35	3.00e-32	132.00
IUUC-Eca-033723	Equus caballus	29.60	2.00e-37	149.00
IUUC-Fca-035670	Felis catus	28.74	5.00e-37	147.00
IUUC-Fal-037266	Ficedula albicollis	27.53	1.00e-34	140.00
IUUC-Gmo-038722	Gadus morhua	28.79	2.00e-36	145.00
IUUC-Ggr-039725	Gaeumannomyces graminis	27.84	2.00e-29	123.00
IUUC-Gga-040836	Gallus gallus	29.03	1.00e-33	136.00
IUUC-Gac-041522	Gasterosteus aculeatus	30.41	3.00e-35	142.00
IUUC-Gma-043454	Glycine max	66.72	0.00e+00	771.00
IUUC-Ggo-044534	Gorilla gorilla	28.45	6.00e-37	147.00
IUUC-Hsa-046452	Homo sapiens	28.45	6.00e-37	147.00
IUUC-Itr-048431	Ictidomys tridecemlineatus	27.59	5.00e-34	137.00
IUUC-Kpa-049356	Komagataella pastoris	23.96	2.00e-19	90.10
IUUC-Lch-050194	Latimeria chalumnae	27.69	1.00e-33	136.00
IUUC-Lpe-051035	Leersia perrieri	54.15	7.00e-143	499.00
IUUC-Loc-052210	Lepisosteus oculatus	31.13	5.00e-35	141.00
IUUC-Lma-053046	Leptosphaeria maculans	25.30	2.00e-29	123.00
IUUC-Laf-053965	Loxodonta africana	28.74	8.00e-36	144.00
IUUC-Mcc-055012	Macaca mulatta	28.16	1.00e-36	147.00
IUUC-Meu-056341	Macropus eugenii	28.77	2.00e-29	122.00
IUUC-Mor-057058	Magnaporthe oryzae	24.86	4.00e-27	116.00
IUUC-Mtr-058356	Medicago truncatula	67.21	0.00e+00	798.00
IUUC-Mla-058932	Melampsora laricipopulina	25.45	1.00e-19	91.70
IUUC-Mga-059494	Meleagris gallopavo	30.29	2.00e-36	145.00
IUUC-Mvi-060464	Microbotryum violaceum	24.24	1.00e-19	91.70
IUUC-Mmr-061409	Microcebus murinus	28.45	1.00e-36	146.00
IUUC-Mdo-062490	Monodelphis domestica	28.57	2.00e-33	135.00
IUUC-Mmu-063281	Mus musculus	28.45	4.00e-37	148.00
IUUC-Mpu-065900	Mustela putorius furo	29.60	2.00e-37	149.00
IUUC-Mlu-067809	Myotis lucifugus	28.45	1.00e-36	146.00
IUUC-Nfi-068473	Neosartorya fischeri	27.08	2.00e-32	133.00
IUUC-Nle-069953	Nomascus leucogenys	28.45	6.00e-37	147.00
IUUC-Opr-070495	Ochotona princeps	27.59	2.00e-32	132.00
IUUC-Ont-071380	Oreochromis niloticus	31.13	1.00e-35	143.00
IUUC-Ocu-073864	Oryctolagus cuniculus	33.07	4.00e-33	134.00
IUUC-Oba-075119	Oryza barthii	48.89	2.00e-162	565.00
IUUC-Obr-076836	Oryza brachyantha	46.57	5.00e-150	524.00
IUUC-Ogl-077393	Oryza glaberrima	48.36	3.00e-154	537.00
IUUC-Ogu-078431	Oryza glumaepatula	48.14	2.00e-156	545.00
IUUC-Oin-079837	Oryza indica	48.89	7.00e-166	576.00
IUUC-Olo-080891	Oryza longistaminata	53.57	6.00e-147	513.00
IUUC-Ome-082008	Oryza meridionalis	46.03	2.00e-142	498.00
IUUC-Oni-082538	Oryza nivara	46.08	7.00e-142	496.00
IUUC-Opu-083682	Oryza punctata	47.53	2.00e-149	521.00
IUUC-Oru-084309	Oryza rufipogon	48.89	9.00e-162	563.00
IUUC-Ola-086829	Oryzias latipes	31.13	7.00e-37	147.00
IUUC-Oga-088914	Otolemur garnettii	28.45	5.00e-36	144.00
IUUC-Oar-089424	Ovis aries	26.78	8.00e-30	124.00
IUUC-Ptr-090892	Pan troglodytes	28.45	6.00e-37	147.00
IUUC-Pan-092497	Papio anubis	28.16	1.00e-36	147.00
IUUC-Psi-093859	Pelodiscus sinensis	28.88	1.00e-33	136.00
IUUC-Pma-094114	Petromyzon marinus	28.29	4.00e-35	141.00
IUUC-Pno-095105	Phaeosphaeria nodorum	24.92	6.00e-28	118.00
IUUC-Ppa-096002	Physcomitrella patens	27.01	4.00e-41	162.00
IUUC-Pfo-097333	Poecilia formosa	31.38	1.00e-37	149.00
IUUC-Pab-097772	Pongo abelii	28.45	6.00e-37	147.00
IUUC-Pca-100608	Procavia capensis	26.67	5.00e-30	124.00
IUUC-Ppe-101524	Prunus persica	63.39	0.00e+00	733.00
IUUC-Pva-102623	Pteropus vampyrus	31.33	1.00e-36	146.00
IUUC-Pgr-103540	Puccinia graminis	25.00	8.00e-17	82.40
IUUC-Ptt-103850	Puccinia triticina	22.97	7.00e-09	55.50
IUUC-Pte-104086	Pyrenophora teres	25.30	6.00e-31	128.00
IUUC-Pyt-104451	Pyrenophora triticirepentis	25.30	1.00e-30	127.00
IUUC-Rno-105398	Rattus norvegicus	28.16	8.00e-36	144.00
IUUC-Sce-106382	Saccharomyces cerevisiae	23.51	5.00e-21	96.70
IUUC-Sha-107652	Sarcophilus harrisii	29.97	3.00e-33	135.00
IUUC-Smo-109364	Selaginella moellendorffii	53.85	6.00e-175	606.00
IUUC-Sit-110254	Setaria italica	49.52	7.00e-161	560.00
IUUC-Sly-111351	Solanum lycopersicum	68.09	0.00e+00	682.00
IUUC-Stu-112243	Solanum tuberosum	67.70	0.00e+00	747.00
IUUC-Sar-113053	Sorex araneus	30.28	6.00e-34	137.00
IUUC-Sbi-114065	Sorghum bicolor	47.40	4.00e-154	537.00
IUUC-Sre-115053	Sporisorium reilianum	25.06	1.00e-24	107.00
IUUC-Ssc-115902	Sus scrofa	27.59	4.00e-34	138.00
IUUC-Tru-117535	Takifugu rubripes	31.13	2.00e-36	145.00
IUUC-Tsy-119203	Tarsius syrichta	29.97	6.00e-33	134.00
IUUC-Tni-120555	Tetraodon nigroviridis	31.13	2.00e-36	145.00
IUUC-Tca-121600	Theobroma cacao	70.49	0.00e+00	870.00
IUUC-Tae-123291	Triticum aestivum	48.96	8.00e-148	516.00
IUUC-Tur-126564	Triticum urartu	50.28	8.00e-93	333.00
IUUC-Tme-127056	Tuber melanosporum	24.65	7.00e-28	118.00
IUUC-Tbe-127372	Tupaia belangeri	27.62	1.00e-28	120.00
IUUC-Ttr-128324	Tursiops truncatus	27.59	4.00e-34	138.00
IUUC-Uma-129602	Ustilago maydis	26.02	2.00e-25	110.00
IUUC-Vpa-130267	Vicugna pacos	33.07	5.00e-33	134.00
IUUC-Vvi-130903	Vitis vinifera	67.70	0.00e+00	782.00
IUUC-Xtr-131847	Xenopus tropicalis	32.30	3.00e-33	135.00
IUUC-Xma-133204	Xiphophorus maculatus	31.38	1.00e-37	149.00
IUUC-Yli-134644	Yarrowia lipolytica	24.46	2.00e-25	110.00
IUUC-Zma-134868	Zea mays	48.20	1.00e-150	526.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence