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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105537
UUCD1 version UUC-RaN-00591
Ensembl Protein ID ENSRNOP00000049006.5
UniProt Accession F1M0R1; F1M0R1_RAT
Genbank Protein ID ENSRNOP00000049006
Protein Name Ring finger protein 213
Genbank Nucleotide ID AABR07030907
Gene Name Rnf213
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000029658.5 ENSRNOT00000044983.5 ENSRNOP00000049006.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 8.30e-07 29.8 3930 3969
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ d +d p++lpC Hv+++ C+q w     ++ ++ +CP+C+
   Q: 3930 CSICQGDAQD-PVCLPCDHVYCLPCIQTW-----LAPGQMICPYCK 3969
           **********.777***************.....89*********7 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MGCPQCGHVS SEKAAKFCSQ CGQKLSPAAT EQDLKNNNAL VEASTTEGKT EPGEVLREEV 60
VLLSSTDSGK ELQNPEESES DASWTTHVSK KEKRRRRRQG TISSSEAASM SSGLWSLDLP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105537|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGGGTGTC CTCAGTGCGG GCATGTCTCC TCAGAGAAGG CAGCCAAGTT CTGTAGCCAG 60
TGTGGACAGA AATTGTCTCC TGCAGCCACC GAGCAAGGTG AGACTAGGTC GGGGAGGGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105537|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR003593--AAA+_ATPase
IPR029038--MetRS_Zn
IPR027417--P-loop_NTPase
IPR031248--RNF213
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00097--zf-C3HC4
SMART

SM00382--AAA
SM00184--RING
Gene Ontology

GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0016887--F:ATPase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0001525--P:angiogenesis
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Apl-004090 Anas platyrhynchos 54.60 0.00e+00 4594.00
IUUC-Ame-010883 Astyanax mexicanus 48.01 0.00e+00 3870.00
IUUC-Cja-019209 Callithrix jacchus 72.82 0.00e+00 4885.00
IUUC-Cfa-020058 Canis familiaris 65.13 0.00e+00 5856.00
IUUC-Cpo-022285 Cavia porcellus 70.69 0.00e+00 3920.00
IUUC-Csa-023613 Chlorocebus sabaeus 66.86 0.00e+00 6760.00
IUUC-Cho-024453 Choloepus hoffmanni 73.65 0.00e+00 2657.00
IUUC-Cin-025584 Ciona intestinalis 32.11 0.00e+00 1456.00
IUUC-Csv-026161 Ciona savignyi 22.92 7.00e-22 98.60
IUUC-Dre-027864 Danio rerio 45.74 0.00e+00 4152.00
IUUC-Dno-029563 Dasypus novemcinctus 60.94 0.00e+00 5871.00
IUUC-Dor-030748 Dipodomys ordii 72.14 0.00e+00 2313.00
IUUC-Eca-034252 Equus caballus 68.21 0.00e+00 6540.00
IUUC-Eeu-035087 Erinaceus europaeus 71.48 0.00e+00 1954.00
IUUC-Fca-036042 Felis catus 69.50 0.00e+00 1598.00
IUUC-Fal-037402 Ficedula albicollis 53.08 0.00e+00 4881.00
IUUC-Gmo-039713 Gadus morhua 49.80 0.00e+00 3768.00
IUUC-Gga-040437 Gallus gallus 55.15 0.00e+00 3532.00
IUUC-Gac-042182 Gasterosteus aculeatus 39.69 0.00e+00 2554.00
IUUC-Ggo-045212 Gorilla gorilla 73.24 0.00e+00 4896.00
IUUC-Hsa-046140 Homo sapiens 65.32 0.00e+00 6718.00
IUUC-Itr-047894 Ictidomys tridecemlineatus 74.54 0.00e+00 4931.00
IUUC-Lch-050262 Latimeria chalumnae 49.83 0.00e+00 4479.00
IUUC-Loc-052115 Lepisosteus oculatus 47.26 0.00e+00 4434.00
IUUC-Laf-054258 Loxodonta africana 45.79 0.00e+00 1207.00
IUUC-Mcc-055793 Macaca mulatta 65.82 0.00e+00 6560.00
IUUC-Meu-055905 Macropus eugenii 58.29 0.00e+00 1173.00
IUUC-Mdo-062190 Monodelphis domestica 59.32 0.00e+00 5818.00
IUUC-Mmu-063486 Mus musculus 84.11 0.00e+00 8781.00
IUUC-Mpu-065783 Mustela putorius furo 61.16 0.00e+00 6172.00
IUUC-Mlu-067959 Myotis lucifugus 67.53 0.00e+00 4416.00
IUUC-Nle-069617 Nomascus leucogenys 72.60 0.00e+00 5268.00
IUUC-Opr-071117 Ochotona princeps 71.44 0.00e+00 2259.00
IUUC-Ont-072667 Oreochromis niloticus 45.15 0.00e+00 4288.00
IUUC-Ocu-074421 Oryctolagus cuniculus 66.97 0.00e+00 1626.00
IUUC-Ola-086411 Oryzias latipes 49.14 0.00e+00 3926.00
IUUC-Oga-088090 Otolemur garnettii 70.75 0.00e+00 4692.00
IUUC-Oar-089763 Ovis aries 64.22 0.00e+00 6595.00
IUUC-Pan-091737 Papio anubis 65.52 0.00e+00 6757.00
IUUC-Psi-093008 Pelodiscus sinensis 57.62 0.00e+00 4984.00
IUUC-Pma-094477 Petromyzon marinus 51.18 0.00e+00 1469.00
IUUC-Pfo-096327 Poecilia formosa 53.00 0.00e+00 3596.00
IUUC-Pab-098316 Pongo abelii 69.11 0.00e+00 3895.00
IUUC-Pca-101059 Procavia capensis 74.78 0.00e+00 2133.00
IUUC-Pva-102703 Pteropus vampyrus 67.64 0.00e+00 3502.00
IUUC-Sha-106990 Sarcophilus harrisii 67.12 0.00e+00 4465.00
IUUC-Spo-108077 Schizosaccharomyces pombe 39.13 1.00e-05 43.90
IUUC-Tgu-116501 Taeniopygia guttata 57.83 0.00e+00 811.00
IUUC-Tru-118139 Takifugu rubripes 34.21 0.00e+00 1080.00
IUUC-Tsy-118810 Tarsius syrichta 72.82 0.00e+00 2253.00
IUUC-Tni-119963 Tetraodon nigroviridis 48.70 0.00e+00 3897.00
IUUC-Tbe-127986 Tupaia belangeri 70.22 0.00e+00 1093.00
IUUC-Xma-134301 Xiphophorus maculatus 47.10 0.00e+00 4232.00
Created Date 25-Jun-2017

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