iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099103

UUCD1 version

UUC-PoT-00935

Ensembl Protein ID

POPTR_0010s17540.1

UniProt Accession

A9PB64; A9PB64_POPTR

Genbank Protein ID

ABK93617.1; EEF02304.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

EF145460; CM000346

Gene Name

POPTRDRAFT_833711; POPTR_0010s17540g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s17540	POPTR_0010s17540.1	POPTR_0010s17540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-07	32.2	116	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCle+ + g  ++ +pC+H fh  C++kw       + + +CP+Cr
   Q: 116  CAICLEEWELGgvVKEMPCKHRFHGGCVEKW------LKIHGNCPVCR 157
           ******8855543667***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASETEFPAE FSSMFERLLR HRDLSLFLPF ILGFTSTNTT EQRDPDQEAP QTTDPNERII 60
LINPFTQGMV VIEGAASLES LLRDIGNKKG QPPASKASIE AMPKVEIGED NKDGECAICL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCACACTAT TCACAAAAAA ATCTAAATCT CCTCTCTCTC TCTCTCTCTC TCTCCAAATC 60
TAACTACCAG TAGCAGTTCG TCATGGCCTC TGAGACTGAA TTTCCTGCCG AGTTTTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s17540g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004858	Anolis carolinensis	42.70	9.00e-16	78.20
IUUC-Aly-006170	Arabidopsis lyrata	52.56	6.00e-58	216.00
IUUC-Ath-007018	Arabidopsis thaliana	54.08	3.00e-55	207.00
IUUC-Bdi-014161	Brachypodium distachyon	54.93	4.00e-19	87.00
IUUC-Bol-016120	Brassica oleracea	52.79	1.00e-53	201.00
IUUC-Bra-017306	Brassica rapa	44.22	3.00e-29	120.00
IUUC-Cho-024680	Choloepus hoffmanni	41.11	2.00e-14	73.90
IUUC-Ete-032338	Echinops telfairi	43.33	9.00e-16	77.80
IUUC-Eeu-034596	Erinaceus europaeus	40.66	3.00e-14	73.60
IUUC-Fca-035465	Felis catus	43.33	2.00e-15	77.40
IUUC-Ggo-044735	Gorilla gorilla	44.44	5.00e-16	79.00
IUUC-Laf-054182	Loxodonta africana	42.22	9.00e-15	74.70
IUUC-Meu-056394	Macropus eugenii	42.70	4.00e-16	79.30
IUUC-Mtr-058137	Medicago truncatula	54.55	6.00e-36	143.00
IUUC-Opr-071190	Ochotona princeps	41.86	1.00e-13	70.90
IUUC-Ocu-073783	Oryctolagus cuniculus	43.33	1.00e-15	77.00
IUUC-Oar-089497	Ovis aries	44.44	5.00e-16	79.00
IUUC-Ptr-091211	Pan troglodytes	41.86	7.00e-14	72.00
IUUC-Pab-097745	Pongo abelii	41.86	8.00e-14	71.60
IUUC-Ppe-101768	Prunus persica	58.25	2.00e-59	221.00
IUUC-Stu-112194	Solanum tuberosum	50.23	5.00e-49	186.00
IUUC-Sar-113270	Sorex araneus	41.11	3.00e-14	73.20
IUUC-Ssc-116194	Sus scrofa	44.44	4.00e-16	79.30
IUUC-Tsy-118954	Tarsius syrichta	45.45	2.00e-16	80.50
IUUC-Tca-121463	Theobroma cacao	67.74	6.00e-75	272.00
IUUC-Vpa-130373	Vicugna pacos	41.11	2.00e-14	74.30
IUUC-Vvi-131507	Vitis vinifera	67.50	5.00e-55	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence