iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000003645.3	ENSCJAT00000007025.2	ENSCJAP00000006654.2
ENSCJAG00000003645.3	ENSCJAT00000007022.2	ENSCJAP00000006651.2
ENSCJAG00000003645.3	ENSCJAT00000058515.2	ENSCJAP00000042606.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.60e-09	37.8	78	166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlkvnpsd.tVaeLKeki.....ekk.lgip.peqqrLiyk..GkiL...eddktLady.glkdgstihllekks 74
           v+++v++++++ e+++k ++++ +V+++K+++     e++ l+++ +++++ + k  G i+   +++++L+++ +++d++++++l++++
   Q: 78   VFCVVEHYENAiEYDCK-EEHAeFVLVRKDMLfnqliEMAlLSLGySHSSAAQAKeiGLIQvgkWNPVPLSYVtDAPDATVADMLQDVY 165
           689**************.77777*******99999998888**************777777***************************9 PP
   S: 75   g 75
           +
   Q: 166  H 166
           8 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

LSMDHLNEAT QGKEHSEMSN NVSDPKGPPA KIARLEQNGS PLGRGRLGST GAKMQGVPLK 60
HSGHLMKTNL RKGTMLPVFC VVEHYENAIE YDCKEEHAEF VLVRKDMLFN QLIEMALLSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTTGTGAC GCACCCTCAG AACTGCAGTA ATGGTCCAGC TGCTTCAGAG GCAACTGGTA 60
ACCACCTCAT TTGGGGATGT TTCTGCCTTG CTAGCAGTGC CAGCGAGAAC TTCATCATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0371--Homeobox
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR003350--CUT_dom
IPR032355--CUTL
IPR009057--Homeobox-like
IPR001356--Homeobox_dom
IPR010982--Lambda_DNA-bd_dom
IPR032392--ULD

PROSITE

PS51042--CUT
PS50071--HOMEOBOX_2

Pfam

PF02376--CUT
PF16557--CUTL
PF00046--Homeobox
PF16534--ULD

SMART

SM01109--CUT
SM00389--HOX

Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0016363--C:nuclear matrix
GO:0016605--C:PML body
GO:0003682--F:chromatin binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227--F:transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0050798--P:activated T cell proliferation
GO:0043367--P:CD4-positive, alpha-beta T cell differentiation
GO:0043374--P:CD8-positive, alpha-beta T cell differentiation
GO:0006338--P:chromatin remodeling
GO:0008544--P:epidermis development
GO:0016571--P:histone methylation
GO:0060004--P:reflex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001269	Ailuropoda melanoleuca	98.25	0.00e+00	1275.00
IUUC-Apl-003442	Anas platyrhynchos	97.16	0.00e+00	1199.00
IUUC-Aca-004969	Anolis carolinensis	88.25	0.00e+00	1395.00
IUUC-Ame-010811	Astyanax mexicanus	67.76	0.00e+00	1073.00
IUUC-Bta-012461	Bos taurus	98.31	0.00e+00	1199.00
IUUC-Cfa-020082	Canis familiaris	98.09	0.00e+00	1272.00
IUUC-Cpo-021601	Cavia porcellus	98.65	0.00e+00	1212.00
IUUC-Csa-023306	Chlorocebus sabaeus	98.99	0.00e+00	1217.00
IUUC-Cho-025063	Choloepus hoffmanni	91.89	0.00e+00	975.00
IUUC-Dre-028396	Danio rerio	71.76	0.00e+00	887.00
IUUC-Dno-029755	Dasypus novemcinctus	87.14	0.00e+00	1330.00
IUUC-Dor-030766	Dipodomys ordii	96.48	0.00e+00	1206.00
IUUC-Dse-031419	Dothistroma septosporum	29.82	1.40e+00	28.90
IUUC-Ete-032547	Echinops telfairi	89.80	2.00e-132	466.00
IUUC-Eca-033394	Equus caballus	93.14	0.00e+00	1432.00
IUUC-Eeu-034706	Erinaceus europaeus	92.30	0.00e+00	1317.00
IUUC-Fca-036482	Felis catus	93.74	0.00e+00	1133.00
IUUC-Fal-037384	Ficedula albicollis	97.64	0.00e+00	1198.00
IUUC-Fso-038109	Fusarium solani	37.29	3.90e-02	33.90
IUUC-Gmo-038956	Gadus morhua	74.84	0.00e+00	675.00
IUUC-Gga-040653	Gallus gallus	89.85	0.00e+00	1422.00
IUUC-Gac-041928	Gasterosteus aculeatus	67.41	0.00e+00	795.00
IUUC-Ggo-044842	Gorilla gorilla	97.88	0.00e+00	1535.00
IUUC-Hsa-046800	Homo sapiens	97.37	0.00e+00	1525.00
IUUC-Lch-050515	Latimeria chalumnae	83.54	0.00e+00	1311.00
IUUC-Loc-052600	Lepisosteus oculatus	74.91	0.00e+00	1207.00
IUUC-Laf-054011	Loxodonta africana	96.62	0.00e+00	1482.00
IUUC-Mga-059444	Meleagris gallopavo	89.74	0.00e+00	1400.00
IUUC-Mmr-061285	Microcebus murinus	97.24	0.00e+00	1483.00
IUUC-Mdo-062444	Monodelphis domestica	94.24	0.00e+00	1493.00
IUUC-Mmu-063758	Mus musculus	98.49	0.00e+00	1216.00
IUUC-Mpu-066758	Mustela putorius furo	95.36	0.00e+00	1469.00
IUUC-Mlu-067012	Myotis lucifugus	98.48	0.00e+00	1213.00
IUUC-Nle-069511	Nomascus leucogenys	97.62	0.00e+00	1486.00
IUUC-Opr-070880	Ochotona princeps	79.50	0.00e+00	1163.00
IUUC-Ont-072450	Oreochromis niloticus	72.99	0.00e+00	900.00
IUUC-Oan-073212	Ornithorhynchus anatinus	94.23	5.00e-84	302.00
IUUC-Ocu-074585	Oryctolagus cuniculus	97.12	0.00e+00	1501.00
IUUC-Oba-075370	Oryza barthii	36.96	1.00e-03	36.60
IUUC-Olo-080429	Oryza longistaminata	32.61	1.40e-02	34.30
IUUC-Ome-081450	Oryza meridionalis	34.78	7.00e-03	35.00
IUUC-Oni-082089	Oryza nivara	24.66	2.70e-02	32.30
IUUC-Ola-087463	Oryzias latipes	63.87	0.00e+00	685.00
IUUC-Oga-089020	Otolemur garnettii	96.87	0.00e+00	1478.00
IUUC-Oar-090026	Ovis aries	86.64	0.00e+00	1365.00
IUUC-Ptr-090639	Pan troglodytes	98.99	0.00e+00	1216.00
IUUC-Pan-092418	Papio anubis	98.74	0.00e+00	1129.00
IUUC-Psi-093141	Pelodiscus sinensis	96.46	0.00e+00	1010.00
IUUC-Ppa-095438	Physcomitrella patens	26.88	2.70e-02	33.10
IUUC-Pfo-096325	Poecilia formosa	79.37	0.00e+00	892.00
IUUC-Pab-098180	Pongo abelii	98.99	0.00e+00	1216.00
IUUC-Pca-100487	Procavia capensis	94.78	0.00e+00	1449.00
IUUC-Pva-102302	Pteropus vampyrus	90.32	0.00e+00	1164.00
IUUC-Rno-105734	Rattus norvegicus	98.31	0.00e+00	1211.00
IUUC-Sha-106963	Sarcophilus harrisii	93.98	0.00e+00	1491.00
IUUC-Sar-113384	Sorex araneus	98.50	0.00e+00	1216.00
IUUC-Ssc-115971	Sus scrofa	98.81	0.00e+00	1214.00
IUUC-Tgu-117121	Taeniopygia guttata	93.50	0.00e+00	1496.00
IUUC-Tru-118767	Takifugu rubripes	63.80	0.00e+00	696.00
IUUC-Tni-120223	Tetraodon nigroviridis	75.00	0.00e+00	873.00
IUUC-Ttr-128230	Tursiops truncatus	94.12	0.00e+00	1468.00
IUUC-Vpa-130676	Vicugna pacos	90.19	0.00e+00	958.00
IUUC-Xtr-132122	Xenopus tropicalis	87.37	0.00e+00	1054.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence