iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ago-007731

Ensembl Protein ID

AAS53870

UniProt Accession

Q752S4; CWC24_ASHGO

Genbank Protein ID

AAS53870.1

Protein Name

Pre-mRNA-splicing factor CWC24

Genbank Nucleotide ID

AE016819

Gene Name

CWC24; AFR499C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AGOS_AFR499C	AAS53870	AAS53870

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	45.38	5.00e-28	122.00	IUUC-Hsa-047000
E3 activity/RING/RING	35.07	2.00e-23	105.00	IUUC-Osa-086166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ashbya gossypii

Functional Description
(View)

Involved in pre-mRNA splicing.

Protein Sequence
(Fasta)

MFRKRNVKGS QQKKAALRVV EDDVECLATP PVVPAKKRKI RELDDTSRSA VRASGFGRDH 60
VSAGTQEAVA RATDDAPDRR AESSGARTAV GSNVRTRVVM DYQPDVCKDY RQTGFCGYGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCAGGA AGAGGAATGT GAAGGGCAGC CAACAGAAGA AGGCTGCTCT GCGTGTGGTG 60
GAGGACGATG TTGAGTGTTT GGCCACCCCA CCTGTTGTCC CCGCGAAGAA AAGGAAGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0747--Spliceosome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50103--ZF_C3H1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4
PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing

KEGG

ago:AGOS_AFR499C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000118	Aegilops tauschii	35.17	4.00e-29	120.00
IUUC-Aml-002002	Ailuropoda melanoleuca	43.05	5.00e-32	129.00
IUUC-Atr-003145	Amborella trichopoda	32.79	3.00e-28	116.00
IUUC-Apl-003440	Anas platyrhynchos	43.09	3.00e-31	126.00
IUUC-Aca-004421	Anolis carolinensis	43.09	1.00e-31	127.00
IUUC-Aly-006121	Arabidopsis lyrata	35.42	4.00e-30	122.00
IUUC-Ath-007493	Arabidopsis thaliana	35.66	5.00e-30	122.00
IUUC-Acl-008186	Aspergillus clavatus	44.97	4.00e-38	149.00
IUUC-Afl-008484	Aspergillus flavus	40.37	2.00e-34	137.00
IUUC-Afu-008971	Aspergillus fumigatus	44.97	3.00e-39	153.00
IUUC-Ani-009499	Aspergillus nidulans	45.14	1.00e-35	140.00
IUUC-Ang-009717	Aspergillus niger	41.46	1.00e-36	144.00
IUUC-Aor-009898	Aspergillus oryzae	40.37	1.00e-34	137.00
IUUC-Ate-010508	Aspergillus terreus	38.07	1.00e-35	141.00
IUUC-Ame-011925	Astyanax mexicanus	39.86	5.00e-34	135.00
IUUC-Bgr-012259	Blumeria graminis	44.20	1.00e-36	144.00
IUUC-Bta-012958	Bos taurus	44.22	2.00e-33	134.00
IUUC-Bci-013882	Botrytis cinerea	39.56	2.00e-37	147.00
IUUC-Bdi-014084	Brachypodium distachyon	32.97	1.00e-29	121.00
IUUC-Bol-016607	Brassica oleracea	36.62	1.00e-29	122.00
IUUC-Bra-017747	Brassica rapa	36.62	4.00e-30	123.00
IUUC-Cel-018698	Caenorhabditis elegans	37.21	3.00e-29	120.00
IUUC-Cja-019434	Callithrix jacchus	41.50	9.00e-31	125.00
IUUC-Cfa-020902	Canis familiaris	42.38	2.00e-32	130.00
IUUC-Cre-022885	Chlamydomonas reinhardtii	37.42	1.00e-27	114.00
IUUC-Csa-023933	Chlorocebus sabaeus	40.67	5.00e-31	125.00
IUUC-Cho-024587	Choloepus hoffmanni	48.10	3.00e-20	89.70
IUUC-Cin-025328	Ciona intestinalis	43.08	9.00e-33	131.00
IUUC-Csv-026148	Ciona savignyi	40.74	4.00e-32	129.00
IUUC-Cgl-026700	Colletotrichum gloeosporioides	36.60	7.00e-35	138.00
IUUC-Cne-026816	Cryptococcus neoformans	52.07	4.00e-35	139.00
IUUC-Dre-027744	Danio rerio	41.22	7.00e-35	138.00
IUUC-Dse-031155	Dothistroma septosporum	50.77	6.00e-36	142.00
IUUC-Dme-031788	Drosophila melanogaster	39.71	5.00e-31	125.00
IUUC-Ete-033013	Echinops telfairi	43.70	9.00e-31	125.00
IUUC-Eca-033460	Equus caballus	42.38	1.00e-32	131.00
IUUC-Fca-035525	Felis catus	42.38	1.00e-32	131.00
IUUC-Fal-037206	Ficedula albicollis	43.51	2.00e-32	130.00
IUUC-Fox-037959	Fusarium oxysporum	37.50	3.00e-36	143.00
IUUC-Fso-038348	Fusarium solani	36.46	7.00e-35	138.00
IUUC-Gmo-038718	Gadus morhua	37.97	3.00e-33	133.00
IUUC-Ggr-040114	Gaeumannomyces graminis	45.51	9.00e-38	148.00
IUUC-Gga-041037	Gallus gallus	41.48	3.00e-32	130.00
IUUC-Gac-042103	Gasterosteus aculeatus	38.31	2.00e-33	133.00
IUUC-Gma-043581	Glycine max	37.24	2.00e-32	130.00
IUUC-Ggo-044906	Gorilla gorilla	43.05	1.00e-32	131.00
IUUC-Hsa-047000	Homo sapiens	43.05	1.00e-32	131.00
IUUC-Hvu-047578	Hordeum vulgare	26.27	1.00e-12	62.80
IUUC-Itr-048102	Ictidomys tridecemlineatus	41.06	6.00e-32	129.00
IUUC-Kpa-049320	Komagataella pastoris	36.89	1.00e-42	163.00
IUUC-Lch-050488	Latimeria chalumnae	42.11	3.00e-35	140.00
IUUC-Lpe-051156	Leersia perrieri	33.78	2.00e-25	107.00
IUUC-Loc-052670	Lepisosteus oculatus	42.75	6.00e-33	132.00
IUUC-Lma-053326	Leptosphaeria maculans	41.76	9.00e-40	155.00
IUUC-Laf-053570	Loxodonta africana	43.36	1.00e-31	127.00
IUUC-Mcc-055375	Macaca mulatta	42.86	5.00e-32	129.00
IUUC-Meu-056191	Macropus eugenii	43.07	7.00e-32	129.00
IUUC-Mor-057193	Magnaporthe oryzae	36.50	2.00e-38	150.00
IUUC-Mpo-057603	Magnaporthe poae	44.64	5.00e-38	149.00
IUUC-Mtr-058182	Medicago truncatula	36.55	3.00e-31	127.00
IUUC-Mla-058921	Melampsora laricipopulina	47.27	2.00e-27	112.00
IUUC-Mga-059281	Meleagris gallopavo	42.75	5.00e-32	129.00
IUUC-Mvi-060317	Microbotryum violaceum	42.96	1.00e-28	118.00
IUUC-Mmr-061744	Microcebus murinus	41.72	3.00e-32	130.00
IUUC-Mmu-063426	Mus musculus	43.15	2.00e-33	134.00
IUUC-Mac-065265	Musa acuminata	35.17	4.00e-26	109.00
IUUC-Mpu-066867	Mustela putorius furo	43.05	6.00e-33	132.00
IUUC-Mlu-067828	Myotis lucifugus	41.78	8.00e-32	128.00
IUUC-Nfi-068575	Neosartorya fischeri	43.62	4.00e-36	142.00
IUUC-Ncr-068828	Neurospora crassa	38.60	4.00e-33	133.00
IUUC-Nle-069137	Nomascus leucogenys	43.05	1.00e-32	131.00
IUUC-Ont-071497	Oreochromis niloticus	39.19	3.00e-33	133.00
IUUC-Oan-073182	Ornithorhynchus anatinus	45.24	2.00e-31	127.00
IUUC-Ocu-073949	Oryctolagus cuniculus	42.11	2.00e-33	133.00
IUUC-Oba-075693	Oryza barthii	33.79	7.00e-26	108.00
IUUC-Obr-076128	Oryza brachyantha	34.69	9.00e-26	108.00
IUUC-Ogl-077323	Oryza glaberrima	33.79	7.00e-26	108.00
IUUC-Ogu-078766	Oryza glumaepatula	33.79	7.00e-26	108.00
IUUC-Oin-080054	Oryza indica	33.79	7.00e-26	108.00
IUUC-Olo-080325	Oryza longistaminata	36.94	1.00e-20	91.70
IUUC-Ome-081331	Oryza meridionalis	33.79	2.00e-26	110.00
IUUC-Oni-082786	Oryza nivara	33.79	6.00e-26	108.00
IUUC-Opu-083855	Oryza punctata	33.79	6.00e-26	108.00
IUUC-Oru-084304	Oryza rufipogon	33.79	7.00e-26	108.00
IUUC-Osa-086166	Oryza sativa	33.79	5.00e-26	109.00
IUUC-Ola-086368	Oryzias latipes	42.96	8.00e-35	138.00
IUUC-Olu-087624	Ostreococcus lucimarinus	34.22	3.00e-27	112.00
IUUC-Oga-088080	Otolemur garnettii	42.38	7.00e-33	132.00
IUUC-Oar-089545	Ovis aries	44.22	2.00e-33	134.00
IUUC-Ptr-090827	Pan troglodytes	43.05	1.00e-32	131.00
IUUC-Pan-092245	Papio anubis	42.86	5.00e-32	129.00
IUUC-Psi-093790	Pelodiscus sinensis	41.48	2.00e-32	130.00
IUUC-Pma-094326	Petromyzon marinus	39.47	1.00e-32	130.00
IUUC-Pno-095057	Phaeosphaeria nodorum	39.77	3.00e-38	149.00
IUUC-Ppa-095690	Physcomitrella patens	37.41	4.00e-28	116.00
IUUC-Pfo-097026	Poecilia formosa	39.86	3.00e-33	133.00
IUUC-Pab-098689	Pongo abelii	43.05	1.00e-32	131.00
IUUC-Pca-100687	Procavia capensis	42.18	6.00e-33	132.00
IUUC-Ppe-101155	Prunus persica	37.50	9.00e-31	124.00
IUUC-Pgr-103440	Puccinia graminis	41.86	4.00e-34	136.00
IUUC-Ptt-103893	Puccinia triticina	34.43	1.00e-22	97.80
IUUC-Pte-104377	Pyrenophora teres	42.77	4.00e-37	145.00
IUUC-Pyt-104731	Pyrenophora triticirepentis	42.77	3.00e-37	146.00
IUUC-Rno-105967	Rattus norvegicus	43.70	1.00e-31	127.00
IUUC-Sce-106215	Saccharomyces cerevisiae	54.76	7.00e-48	181.00
IUUC-Sha-107587	Sarcophilus harrisii	44.44	2.00e-30	124.00
IUUC-Sja-107955	Schizosaccharomyces japonicus	37.63	2.00e-36	144.00
IUUC-Spo-108336	Schizosaccharomyces pombe	39.49	1.00e-36	145.00
IUUC-Smo-108930	Selaginella moellendorffii	40.14	2.00e-31	127.00
IUUC-Sit-110234	Setaria italica	34.03	9.00e-27	111.00
IUUC-Sly-111790	Solanum lycopersicum	37.67	7.00e-30	120.00
IUUC-Stu-111994	Solanum tuberosum	37.67	4.00e-31	126.00
IUUC-Sar-113374	Sorex araneus	40.62	5.00e-32	129.00
IUUC-Sbi-114766	Sorghum bicolor	35.86	5.00e-28	115.00
IUUC-Sre-115021	Sporisorium reilianum	42.75	4.00e-32	129.00
IUUC-Ssc-115474	Sus scrofa	43.42	1.00e-33	134.00
IUUC-Tgu-116649	Taeniopygia guttata	42.22	9.00e-33	131.00
IUUC-Tru-117701	Takifugu rubripes	39.73	6.00e-33	132.00
IUUC-Tni-120607	Tetraodon nigroviridis	40.60	2.00e-32	130.00
IUUC-Tca-121278	Theobroma cacao	35.15	4.00e-26	109.00
IUUC-Tre-122006	Trichoderma reesei	33.85	8.00e-30	122.00
IUUC-Tvi-122670	Trichoderma virens	36.13	8.00e-34	135.00
IUUC-Tae-122716	Triticum aestivum	31.75	4.00e-29	119.00
IUUC-Tur-126208	Triticum urartu	32.42	2.00e-28	117.00
IUUC-Tme-126908	Tuber melanosporum	42.07	1.00e-34	138.00
IUUC-Tbe-127394	Tupaia belangeri	42.76	4.00e-33	132.00
IUUC-Uma-129339	Ustilago maydis	44.70	6.00e-33	132.00
IUUC-Vda-129895	Verticillium dahliae	42.29	2.00e-37	147.00
IUUC-Vpa-130519	Vicugna pacos	42.96	5.00e-31	125.00
IUUC-Vvi-131382	Vitis vinifera	35.62	2.00e-26	110.00
IUUC-Xtr-131923	Xenopus tropicalis	42.25	2.00e-33	134.00
IUUC-Xma-133705	Xiphophorus maculatus	41.45	4.00e-34	136.00
IUUC-Yli-134518	Yarrowia lipolytica	44.06	9.00e-35	137.00
IUUC-Zma-135029	Zea mays	35.25	1.00e-26	111.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence