iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000027378.16	ENSMUST00000028857.13	ENSMUSP00000028857.7
ENSMUSG00000027378.16	ENSMUST00000110357.1	ENSMUSP00000105986.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	miRNAMap
RAID2
Protein-protein Interaction
iRefIndex	HINT	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	4.30e-11	43.7	160	212

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 6    vqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvek 61
            ++l d+ aq++++Lt+kkGdv+++i  e++  gW+ + k++eg +Gl+P  + e 
   Q: 160  YIALGDFAAQQTGDLTFKKGDVLHII--EKKPDGWWLA-KDAEGVEGLIPRTYLEP 212
           56888*********************..88899***99.7***********99886 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MLARRPRDPL QALRRRGQEL KLQVDSLVTE SQLTGALEPS KRREIYQRCI QLKQAVDENK 60
NTLQKLNKAD EAAPVGNYEQ RKEEEHSLLE KLACQLQELA VSISRKDALK VEAHSDKEED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCCTGACA ACCGGCGCGG TCCCGCCGGC GGCGGCTAGG CCGATGCTCG CCCGGCGGCC 60
GCGGGACCCG CTGCAGGCGC TGAGGCGCCG CGGGCAGGAG CTGAAGCTGC AGGTAGGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR030642--NPHP1_SH3
IPR001452--SH3_domain

PROSITE

PS50002--SH3

Pfam

PF00018--SH3_1

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3

Gene Ontology

GO:0005911--C:cell-cell junction
GO:0031514--C:motile cilium
GO:1903348--P:positive regulation of bicellular tight junction assembly

KEGG

mmu:53885

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001244	Ailuropoda melanoleuca	71.77	0.00e+00	947.00
IUUC-Aca-004918	Anolis carolinensis	64.40	0.00e+00	780.00
IUUC-Ame-011864	Astyanax mexicanus	46.13	6.00e-130	457.00
IUUC-Bta-013182	Bos taurus	76.04	0.00e+00	941.00
IUUC-Cpo-022082	Cavia porcellus	75.87	0.00e+00	941.00
IUUC-Csa-023896	Chlorocebus sabaeus	77.71	0.00e+00	992.00
IUUC-Cin-025783	Ciona intestinalis	36.10	4.00e-114	405.00
IUUC-Csv-026201	Ciona savignyi	42.91	2.00e-116	412.00
IUUC-Dre-028081	Danio rerio	50.94	2.00e-149	522.00
IUUC-Eca-034408	Equus caballus	78.61	0.00e+00	998.00
IUUC-Fca-036474	Felis catus	73.66	0.00e+00	956.00
IUUC-Ggo-045393	Gorilla gorilla	74.64	0.00e+00	983.00
IUUC-Hsa-046780	Homo sapiens	70.11	0.00e+00	931.00
IUUC-Lch-050573	Latimeria chalumnae	63.78	2.00e-94	340.00
IUUC-Loc-052676	Lepisosteus oculatus	53.35	0.00e+00	673.00
IUUC-Laf-053900	Loxodonta africana	76.43	0.00e+00	949.00
IUUC-Mcc-054917	Macaca mulatta	74.31	0.00e+00	959.00
IUUC-Mmr-061199	Microcebus murinus	74.92	0.00e+00	870.00
IUUC-Mpu-066620	Mustela putorius furo	75.75	0.00e+00	952.00
IUUC-Mlu-067415	Myotis lucifugus	75.86	0.00e+00	926.00
IUUC-Nle-069490	Nomascus leucogenys	71.64	0.00e+00	951.00
IUUC-Ocu-073831	Oryctolagus cuniculus	76.49	0.00e+00	1004.00
IUUC-Oga-088746	Otolemur garnettii	77.75	0.00e+00	948.00
IUUC-Oar-089722	Ovis aries	71.75	0.00e+00	865.00
IUUC-Ptr-090981	Pan troglodytes	69.97	0.00e+00	936.00
IUUC-Pan-092695	Papio anubis	77.42	0.00e+00	985.00
IUUC-Psi-093354	Pelodiscus sinensis	62.28	0.00e+00	816.00
IUUC-Pab-098055	Pongo abelii	70.78	0.00e+00	940.00
IUUC-Tni-120650	Tetraodon nigroviridis	45.78	2.00e-158	553.00
IUUC-Ttr-129276	Tursiops truncatus	55.45	1.00e-110	393.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence