iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022529

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02007400

Gene Name

TBL3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000005998.3	ENSCPOT00000006061.2	ENSCPOP00000005415.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-52	173.0	522	561
UBD/Beta-Prp	1.00e-95	320.4	415	645

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  + +c++f +    l+++s Dgtik+W+l +  +lk+
   Q: 522  GHRRGLWCVQFsPMdQVLATASADGTIKLWSLQDLSCLKT 561
           8999*******977789****************9999985 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls...............tgkcvhtlkghedsvlslsfspsgdklvsGshd 115
           +++++ sgh+  v ++++s+ ++ +lvtgs+D t+k+w+l                  +   t + he+++ s+++sp+++ l++Gs+d
   Q: 415  SCVAQGSGHTHSVGTIYCSRLKEsFLVTGSQDCTVKLWPLPeallsksttpdsdpiLLQAQTTQRCHEKDINSVAISPNDKLLATGSQD 503
           567788999999888888887667**************55445555556555433344444555589********************** PP
   S: 116  rtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtv 204
           rt+++w l++ q +  ++sgh++  +cv+++p +++l+++s+D+t++lW+l+  ++l+t++g h+ sv +++f s g++l+s + dg +
   Q: 504  RTAKLWTLPQCQLVG-VFSGHRRGLWCVQFSPMDQVLATASADGTIKLWSLQDLSCLKTFEG-HDASVLKVAFVSRGTQLLSSGSDGLL 590
           **************9.********************************************99.************************** PP
   S: 205  klwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllk 258
           klw ++++ecvrtl +h+d v+ ++  + d++ ++g+sD  + +W d++  +   
   Q: 591  KLWTIKNNECVRTLDAHEDKVWGLHCNQLDDHALTGASDSRVILWkDVTEAEQAE 645
           *********************************************8777665554 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

GNNMAETVAG VGRFKANYAV ERKIEPFYKG GKVQLDQTGH HLFCICGNRV NVLDVASGSV 60
LQSLEQEDQE DITAFDLSPD NEVLVTASRA LLLAQWVWRE GSVTRLWKAI HTAPVATMAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAACAATA TGGCTGAAAC AGTTGCCGGA GTGGGCCGCT TTAAAGCTAA GTAAGCTTGG 60
GGCTGCGGGG ACCACCTGGT GAGGGCCACG GATTTGCTGC TGGAGTAACA AGCCCCTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	35.21	6.00e-143	501.00
IUUC-Aml-002376	Ailuropoda melanoleuca	88.42	0.00e+00	1388.00
IUUC-Atr-002486	Amborella trichopoda	38.05	4.00e-160	558.00
IUUC-Apl-003519	Anas platyrhynchos	61.29	0.00e+00	902.00
IUUC-Aca-004363	Anolis carolinensis	55.56	2.00e-147	514.00
IUUC-Aly-006152	Arabidopsis lyrata	34.97	6.00e-149	521.00
IUUC-Ath-006966	Arabidopsis thaliana	35.29	1.00e-146	513.00
IUUC-Ago-007746	Ashbya gossypii	30.73	2.00e-105	376.00
IUUC-Acl-008009	Aspergillus clavatus	29.63	6.00e-105	375.00
IUUC-Afl-008681	Aspergillus flavus	28.92	6.00e-95	342.00
IUUC-Afu-008798	Aspergillus fumigatus	29.46	3.00e-93	336.00
IUUC-Ani-009278	Aspergillus nidulans	28.33	1.00e-96	348.00
IUUC-Ang-009640	Aspergillus niger	29.58	3.00e-101	363.00
IUUC-Aor-010160	Aspergillus oryzae	28.92	7.00e-95	342.00
IUUC-Ate-010320	Aspergillus terreus	28.83	3.00e-103	370.00
IUUC-Ame-010930	Astyanax mexicanus	59.31	9.00e-74	269.00
IUUC-Bgr-012054	Blumeria graminis	28.46	7.00e-102	365.00
IUUC-Bta-012611	Bos taurus	88.47	0.00e+00	1381.00
IUUC-Bci-013797	Botrytis cinerea	31.60	7.00e-113	401.00
IUUC-Bdi-014384	Brachypodium distachyon	37.79	4.00e-160	558.00
IUUC-Bol-015097	Brassica oleracea	36.07	2.00e-147	516.00
IUUC-Bra-017798	Brassica rapa	36.20	7.00e-149	521.00
IUUC-Cel-018664	Caenorhabditis elegans	32.09	4.00e-122	432.00
IUUC-Cja-019092	Callithrix jacchus	90.34	0.00e+00	1451.00
IUUC-Cfa-021040	Canis familiaris	87.63	0.00e+00	1383.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	58.78	6.00e-46	175.00
IUUC-Csa-024205	Chlorocebus sabaeus	90.59	0.00e+00	1454.00
IUUC-Cin-025560	Ciona intestinalis	45.06	0.00e+00	723.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	31.08	2.00e-112	400.00
IUUC-Cne-027082	Cryptococcus neoformans	30.04	3.00e-112	399.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.16	5.00e-30	126.00
IUUC-Dre-028138	Danio rerio	52.88	0.00e+00	875.00
IUUC-Dno-029914	Dasypus novemcinctus	65.30	0.00e+00	816.00
IUUC-Dor-030685	Dipodomys ordii	78.67	0.00e+00	940.00
IUUC-Dse-031429	Dothistroma septosporum	30.05	7.00e-100	358.00
IUUC-Dme-031995	Drosophila melanogaster	32.31	5.00e-119	421.00
IUUC-Ete-033086	Echinops telfairi	89.29	0.00e+00	778.00
IUUC-Eca-034354	Equus caballus	91.92	0.00e+00	1415.00
IUUC-Eeu-034832	Erinaceus europaeus	84.60	0.00e+00	789.00
IUUC-Fca-036136	Felis catus	83.69	0.00e+00	1319.00
IUUC-Fal-036859	Ficedula albicollis	65.20	0.00e+00	1042.00
IUUC-Fox-037863	Fusarium oxysporum	31.59	3.00e-101	362.00
IUUC-Fso-038389	Fusarium solani	30.56	6.00e-111	395.00
IUUC-Gmo-038711	Gadus morhua	57.68	0.00e+00	905.00
IUUC-Ggr-039820	Gaeumannomyces graminis	29.08	8.00e-103	368.00
IUUC-Gga-040263	Gallus gallus	65.17	0.00e+00	1078.00
IUUC-Gac-041291	Gasterosteus aculeatus	60.72	0.00e+00	1026.00
IUUC-Gma-044026	Glycine max	38.43	3.00e-163	568.00
IUUC-Ggo-044693	Gorilla gorilla	90.10	0.00e+00	1423.00
IUUC-Hsa-046048	Homo sapiens	90.23	0.00e+00	1426.00
IUUC-Hvu-047608	Hordeum vulgare	37.33	3.00e-159	555.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	90.60	0.00e+00	1468.00
IUUC-Kpa-049209	Komagataella pastoris	32.20	1.00e-116	414.00
IUUC-Lch-050085	Latimeria chalumnae	62.39	0.00e+00	989.00
IUUC-Lpe-050945	Leersia perrieri	37.78	2.00e-157	549.00
IUUC-Loc-052679	Lepisosteus oculatus	64.32	0.00e+00	1075.00
IUUC-Laf-053685	Loxodonta africana	86.95	0.00e+00	1328.00
IUUC-Mcc-055861	Macaca mulatta	90.72	0.00e+00	1426.00
IUUC-Meu-056820	Macropus eugenii	71.06	0.00e+00	970.00
IUUC-Mor-057234	Magnaporthe oryzae	29.06	3.00e-102	366.00
IUUC-Mpo-057456	Magnaporthe poae	30.35	1.00e-83	303.00
IUUC-Mtr-058122	Medicago truncatula	39.17	7.00e-166	577.00
IUUC-Mla-058980	Melampsora laricipopulina	28.34	7.00e-96	345.00
IUUC-Mga-060080	Meleagris gallopavo	64.05	0.00e+00	1065.00
IUUC-Mvi-060338	Microbotryum violaceum	35.57	5.00e-142	498.00
IUUC-Mmr-060762	Microcebus murinus	90.97	0.00e+00	1409.00
IUUC-Mdo-061975	Monodelphis domestica	74.16	0.00e+00	1172.00
IUUC-Mmu-064038	Mus musculus	89.89	0.00e+00	1413.00
IUUC-Mac-065189	Musa acuminata	36.06	2.00e-156	546.00
IUUC-Mpu-066526	Mustela putorius furo	88.59	0.00e+00	1383.00
IUUC-Mlu-067716	Myotis lucifugus	89.18	0.00e+00	1476.00
IUUC-Nfi-068474	Neosartorya fischeri	29.75	1.00e-96	348.00
IUUC-Ncr-068826	Neurospora crassa	27.98	6.00e-95	342.00
IUUC-Nle-069832	Nomascus leucogenys	90.97	0.00e+00	1461.00
IUUC-Opr-071183	Ochotona princeps	80.80	0.00e+00	1285.00
IUUC-Ont-072371	Oreochromis niloticus	62.02	0.00e+00	1021.00
IUUC-Oan-073491	Ornithorhynchus anatinus	65.91	0.00e+00	939.00
IUUC-Oba-075963	Oryza barthii	37.03	9.00e-159	554.00
IUUC-Obr-076173	Oryza brachyantha	38.09	3.00e-157	549.00
IUUC-Ogl-077692	Oryza glaberrima	36.78	9.00e-159	554.00
IUUC-Ogu-078965	Oryza glumaepatula	37.03	9.00e-159	554.00
IUUC-Oin-079708	Oryza indica	37.03	4.00e-159	555.00
IUUC-Olo-080679	Oryza longistaminata	36.45	3.00e-155	542.00
IUUC-Oni-082960	Oryza nivara	36.91	1.00e-158	553.00
IUUC-Opu-083282	Oryza punctata	36.67	1.00e-151	530.00
IUUC-Oru-085224	Oryza rufipogon	37.03	5.00e-159	555.00
IUUC-Osa-085320	Oryza sativa	37.03	5.00e-159	555.00
IUUC-Ola-086370	Oryzias latipes	47.42	3.00e-131	462.00
IUUC-Olu-087814	Ostreococcus lucimarinus	32.28	5.00e-99	355.00
IUUC-Oga-088458	Otolemur garnettii	88.71	0.00e+00	1478.00
IUUC-Oar-090032	Ovis aries	80.03	0.00e+00	978.00
IUUC-Ptr-090749	Pan troglodytes	89.72	0.00e+00	1408.00
IUUC-Pan-091691	Papio anubis	87.56	0.00e+00	1362.00
IUUC-Psi-093200	Pelodiscus sinensis	65.07	0.00e+00	1069.00
IUUC-Pma-094165	Petromyzon marinus	51.70	0.00e+00	644.00
IUUC-Pno-095048	Phaeosphaeria nodorum	31.97	9.00e-89	321.00
IUUC-Ppa-095336	Physcomitrella patens	40.59	5.00e-161	561.00
IUUC-Pfo-096132	Poecilia formosa	61.20	0.00e+00	984.00
IUUC-Pab-097855	Pongo abelii	89.34	0.00e+00	1439.00
IUUC-Pop-099434	Populus trichocarpa	36.48	2.00e-151	530.00
IUUC-Pca-100232	Procavia capensis	83.89	2.00e-166	579.00
IUUC-Ppe-101665	Prunus persica	36.33	4.00e-156	545.00
IUUC-Pva-102178	Pteropus vampyrus	89.31	0.00e+00	1425.00
IUUC-Pgr-103288	Puccinia graminis	31.44	1.00e-83	304.00
IUUC-Ptt-103808	Puccinia triticina	32.23	4.00e-86	312.00
IUUC-Pte-104205	Pyrenophora teres	30.34	2.00e-102	367.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	29.44	2.00e-93	337.00
IUUC-Rno-105617	Rattus norvegicus	89.48	0.00e+00	1401.00
IUUC-Sce-106281	Saccharomyces cerevisiae	31.00	5.00e-110	392.00
IUUC-Sha-107378	Sarcophilus harrisii	74.81	0.00e+00	1161.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.05	2.00e-123	436.00
IUUC-Spo-108361	Schizosaccharomyces pombe	32.83	1.00e-117	417.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	31.63	4.00e-116	412.00
IUUC-Smo-109632	Selaginella moellendorffii	38.96	2.00e-158	553.00
IUUC-Sit-110258	Setaria italica	37.32	3.00e-162	565.00
IUUC-Sly-111521	Solanum lycopersicum	36.69	8.00e-154	537.00
IUUC-Stu-112718	Solanum tuberosum	44.29	4.00e-33	133.00
IUUC-Sar-113586	Sorex araneus	77.40	1.00e-64	240.00
IUUC-Sbi-114768	Sorghum bicolor	38.29	1.00e-166	580.00
IUUC-Sre-115159	Sporisorium reilianum	34.93	8.00e-98	352.00
IUUC-Ssc-116342	Sus scrofa	67.47	0.00e+00	927.00
IUUC-Tgu-117320	Taeniopygia guttata	63.73	0.00e+00	1003.00
IUUC-Tru-118024	Takifugu rubripes	60.77	0.00e+00	985.00
IUUC-Tni-119971	Tetraodon nigroviridis	61.01	0.00e+00	986.00
IUUC-Tca-121248	Theobroma cacao	36.82	4.00e-157	548.00
IUUC-Tre-122079	Trichoderma reesei	30.68	2.00e-102	366.00
IUUC-Tvi-122554	Trichoderma virens	30.51	5.00e-102	365.00
IUUC-Tae-123552	Triticum aestivum	37.65	1.00e-161	563.00
IUUC-Tur-126436	Triticum urartu	35.95	2.00e-129	456.00
IUUC-Tme-126942	Tuber melanosporum	31.61	8.00e-109	388.00
IUUC-Tbe-128000	Tupaia belangeri	88.82	6.00e-85	308.00
IUUC-Ttr-128964	Tursiops truncatus	88.21	0.00e+00	1402.00
IUUC-Uma-129473	Ustilago maydis	33.41	2.00e-107	383.00
IUUC-Vda-129749	Verticillium dahliae	30.95	2.00e-98	353.00
IUUC-Vvi-131511	Vitis vinifera	37.70	7.00e-157	547.00
IUUC-Xtr-132816	Xenopus tropicalis	56.30	0.00e+00	897.00
IUUC-Xma-133672	Xiphophorus maculatus	61.45	0.00e+00	1019.00
IUUC-Yli-134602	Yarrowia lipolytica	35.23	4.00e-138	485.00
IUUC-Zma-135976	Zea mays	36.37	2.00e-155	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence