iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Rno-105456

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 65

Genbank Nucleotide ID

AC136482

Gene Name

Trim65

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000024145.6	ENSRNOT00000046026.5	ENSRNOP00000047932.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	63.53	4.00e-153	539.00	IUUC-Hsa-046113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MWSCPGRPEG AAPQLPVRQK PDKGDLDPCQ GTFRGTRAQR SRCPCALPSS WTVLRPSVAS 60
VPLRGLRTQD LASAMAVQLL EEDLVTCPIC LGRYCDPVTL PCGHTFCGNC IQDSWRCCEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTGTTCCA GAAAAAACAA AACACACGGC CCTGACCAAA CACTACCAGG CTCCATGCGG 60
GACGACCCTC GCTCCCATTT TCACTGTCCG GGAAAACATG ACAGAGACCA CAACTAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR013829--Hemagglutn_stalk
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0008270--F:zinc ion binding
GO:0010508--P:positive regulation of autophagy

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002422	Ailuropoda melanoleuca	63.57	5.00e-125	441.00
IUUC-Ame-011110	Astyanax mexicanus	31.74	1.00e-54	207.00
IUUC-Bta-012830	Bos taurus	61.67	1.00e-142	499.00
IUUC-Cja-019398	Callithrix jacchus	70.63	3.00e-96	344.00
IUUC-Cfa-021033	Canis familiaris	64.85	6.00e-128	451.00
IUUC-Cpo-021359	Cavia porcellus	61.85	9.00e-149	520.00
IUUC-Csa-023706	Chlorocebus sabaeus	61.66	5.00e-156	544.00
IUUC-Dre-027965	Danio rerio	29.48	1.00e-51	197.00
IUUC-Dno-029551	Dasypus novemcinctus	51.02	6.00e-127	448.00
IUUC-Dor-030830	Dipodomys ordii	58.90	1.00e-133	469.00
IUUC-Eca-033217	Equus caballus	65.12	2.00e-111	395.00
IUUC-Fca-036403	Felis catus	61.03	1.00e-157	549.00
IUUC-Fal-037118	Ficedula albicollis	37.57	7.00e-79	288.00
IUUC-Gmo-039107	Gadus morhua	28.57	3.00e-49	189.00
IUUC-Gac-042501	Gasterosteus aculeatus	30.16	5.00e-54	205.00
IUUC-Ggo-044481	Gorilla gorilla	60.80	1.00e-150	526.00
IUUC-Hsa-046113	Homo sapiens	62.76	2.00e-159	555.00
IUUC-Itr-049000	Ictidomys tridecemlineatus	58.80	2.00e-131	462.00
IUUC-Loc-052279	Lepisosteus oculatus	29.27	5.00e-54	205.00
IUUC-Laf-054143	Loxodonta africana	61.09	2.00e-141	495.00
IUUC-Mcc-055216	Macaca mulatta	62.04	1.00e-154	540.00
IUUC-Meu-056384	Macropus eugenii	57.35	1.00e-65	243.00
IUUC-Mmr-061758	Microcebus murinus	66.07	1.00e-140	493.00
IUUC-Mdo-062422	Monodelphis domestica	39.24	4.00e-53	202.00
IUUC-Mmu-063753	Mus musculus	82.06	0.00e+00	754.00
IUUC-Mpu-065880	Mustela putorius furo	62.26	5.00e-145	507.00
IUUC-Mlu-067629	Myotis lucifugus	55.07	7.00e-68	250.00
IUUC-Nle-069604	Nomascus leucogenys	61.10	1.00e-102	366.00
IUUC-Opr-070884	Ochotona princeps	59.96	2.00e-148	519.00
IUUC-Ont-072089	Oreochromis niloticus	30.35	2.00e-46	180.00
IUUC-Oan-073697	Ornithorhynchus anatinus	53.41	6.00e-47	179.00
IUUC-Ocu-073936	Oryctolagus cuniculus	55.45	1.00e-132	466.00
IUUC-Oga-087916	Otolemur garnettii	59.61	2.00e-120	426.00
IUUC-Oar-090188	Ovis aries	59.96	3.00e-128	451.00
IUUC-Ptr-091364	Pan troglodytes	64.16	1.00e-108	386.00
IUUC-Pan-092240	Papio anubis	63.76	6.00e-165	573.00
IUUC-Psi-093439	Pelodiscus sinensis	43.98	9.00e-46	176.00
IUUC-Pfo-097460	Poecilia formosa	31.20	4.00e-56	212.00
IUUC-Pab-098661	Pongo abelii	55.47	2.00e-127	448.00
IUUC-Pva-102208	Pteropus vampyrus	62.60	3.00e-147	515.00
IUUC-Sha-107040	Sarcophilus harrisii	46.37	1.00e-106	379.00
IUUC-Sar-113700	Sorex araneus	62.70	7.00e-63	234.00
IUUC-Ssc-115895	Sus scrofa	61.48	1.00e-150	526.00
IUUC-Tru-118244	Takifugu rubripes	30.08	2.00e-50	193.00
IUUC-Tni-120643	Tetraodon nigroviridis	30.00	3.00e-50	192.00
IUUC-Tbe-127865	Tupaia belangeri	55.11	1.00e-59	223.00
IUUC-Ttr-128578	Tursiops truncatus	63.51	2.00e-139	488.00
IUUC-Xtr-131897	Xenopus tropicalis	31.56	6.00e-68	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence