iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLM
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	77.73	6.00e-171	597.00	IUUC-Hsa-046896

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MRLPCEVEVR SCHLPTLGLK SRGKGVRAVV SLCQAPSKNE LQPGARTETS GCACLLVSTM 60
KDRQGTRYRL RENIEQLFTK FVDEGKATVR LKEPPVDICL SKANPGNLKT FLSAMRLAHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGCCTGAAG GACCTGAAGG CAAGCTAGCT GCAAGATGAG GCTTCCCTGC GAGGTTGAGG 60
TCCGTAGCTG TCACTTGCCA ACCTTGGGAC TCAAGAGCCG AGGAAAGGGC GTGCGAGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR003591--Leu-rich_rpt_typical-subtyp

PROSITE

PS51450--LRR

Pfam

PF13855--LRR_8

SMART

SM00369--LRR_TYP

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005886--C:plasma membrane
GO:0007165--P:signal transduction

KEGG

rno:685860

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001780	Ailuropoda melanoleuca	75.71	0.00e+00	658.00
IUUC-Apl-003947	Anas platyrhynchos	70.49	3.00e-93	334.00
IUUC-Aca-004845	Anolis carolinensis	65.72	3.00e-139	488.00
IUUC-Ame-011571	Astyanax mexicanus	59.62	4.00e-128	451.00
IUUC-Bta-013510	Bos taurus	76.89	0.00e+00	650.00
IUUC-Cel-018313	Caenorhabditis elegans	27.08	9.00e-16	78.20
IUUC-Cja-019616	Callithrix jacchus	76.30	0.00e+00	639.00
IUUC-Cfa-020085	Canis familiaris	75.71	0.00e+00	644.00
IUUC-Cpo-022006	Cavia porcellus	75.47	4.00e-172	597.00
IUUC-Cre-022825	Chlamydomonas reinhardtii	37.27	3.00e-08	53.10
IUUC-Csa-023376	Chlorocebus sabaeus	77.25	0.00e+00	656.00
IUUC-Cho-024851	Choloepus hoffmanni	76.54	6.00e-171	593.00
IUUC-Csv-025951	Ciona savignyi	38.82	3.00e-78	285.00
IUUC-Dre-028231	Danio rerio	51.21	4.00e-47	181.00
IUUC-Dno-029840	Dasypus novemcinctus	75.53	0.00e+00	642.00
IUUC-Dor-030722	Dipodomys ordii	76.54	0.00e+00	647.00
IUUC-Dme-031624	Drosophila melanogaster	30.81	4.00e-33	135.00
IUUC-Ete-032265	Echinops telfairi	77.07	0.00e+00	644.00
IUUC-Eca-034050	Equus caballus	80.51	3.00e-166	577.00
IUUC-Eeu-034807	Erinaceus europaeus	70.48	2.00e-160	558.00
IUUC-Fca-035883	Felis catus	75.53	0.00e+00	637.00
IUUC-Fal-037470	Ficedula albicollis	63.46	1.00e-111	396.00
IUUC-Gmo-039145	Gadus morhua	56.73	1.00e-132	466.00
IUUC-Gga-040580	Gallus gallus	68.53	4.00e-145	507.00
IUUC-Gac-041408	Gasterosteus aculeatus	55.05	2.00e-126	445.00
IUUC-Ggo-044999	Gorilla gorilla	77.73	0.00e+00	654.00
IUUC-Hsa-046896	Homo sapiens	77.73	0.00e+00	653.00
IUUC-Itr-048389	Ictidomys tridecemlineatus	76.71	0.00e+00	666.00
IUUC-Lch-049921	Latimeria chalumnae	66.35	1.00e-146	512.00
IUUC-Loc-052946	Lepisosteus oculatus	58.65	3.00e-126	444.00
IUUC-Laf-053665	Loxodonta africana	77.36	0.00e+00	650.00
IUUC-Mcc-055451	Macaca mulatta	77.25	0.00e+00	656.00
IUUC-Meu-056760	Macropus eugenii	68.98	1.00e-84	306.00
IUUC-Mga-059693	Meleagris gallopavo	69.21	2.00e-111	395.00
IUUC-Mmr-061640	Microcebus murinus	77.49	0.00e+00	648.00
IUUC-Mdo-062013	Monodelphis domestica	69.71	3.00e-147	514.00
IUUC-Mmu-064208	Mus musculus	91.92	0.00e+00	744.00
IUUC-Mpu-066695	Mustela putorius furo	74.49	7.00e-148	516.00
IUUC-Mlu-067598	Myotis lucifugus	75.53	4.00e-180	623.00
IUUC-Nle-069282	Nomascus leucogenys	78.67	0.00e+00	630.00
IUUC-Opr-070622	Ochotona princeps	71.80	1.00e-166	579.00
IUUC-Ont-072349	Oreochromis niloticus	56.73	5.00e-129	454.00
IUUC-Oan-073270	Ornithorhynchus anatinus	73.56	7.00e-127	446.00
IUUC-Ocu-074328	Oryctolagus cuniculus	78.25	0.00e+00	665.00
IUUC-Obr-076454	Oryza brachyantha	38.35	1.00e-15	77.80
IUUC-Ogl-077480	Oryza glaberrima	36.84	7.00e-15	74.70
IUUC-Oin-079319	Oryza indica	36.84	8.00e-15	75.10
IUUC-Olo-080636	Oryza longistaminata	33.03	6.50e-01	29.60
IUUC-Ome-081910	Oryza meridionalis	32.34	2.00e-12	67.80
IUUC-Ola-087391	Oryzias latipes	55.79	6.00e-133	467.00
IUUC-Oga-088088	Otolemur garnettii	76.26	0.00e+00	630.00
IUUC-Oar-089741	Ovis aries	76.62	6.00e-178	616.00
IUUC-Ptr-091019	Pan troglodytes	77.73	0.00e+00	655.00
IUUC-Pan-092495	Papio anubis	77.49	0.00e+00	658.00
IUUC-Psi-092946	Pelodiscus sinensis	72.22	4.00e-96	344.00
IUUC-Pma-094443	Petromyzon marinus	43.94	2.00e-78	286.00
IUUC-Pfo-096494	Poecilia formosa	55.53	3.00e-127	447.00
IUUC-Pab-097847	Pongo abelii	76.54	0.00e+00	644.00
IUUC-Pva-103223	Pteropus vampyrus	76.07	1.00e-176	612.00
IUUC-Sha-106939	Sarcophilus harrisii	72.13	2.00e-135	475.00
IUUC-Sly-111052	Solanum lycopersicum	34.62	2.00e-15	77.00
IUUC-Stu-112067	Solanum tuberosum	34.64	8.00e-16	78.20
IUUC-Sar-113321	Sorex araneus	69.19	1.00e-157	549.00
IUUC-Ssc-116378	Sus scrofa	80.14	1.00e-120	426.00
IUUC-Tgu-117441	Taeniopygia guttata	63.24	1.00e-102	366.00
IUUC-Tru-118303	Takifugu rubripes	56.77	2.00e-123	435.00
IUUC-Tsy-119397	Tarsius syrichta	74.89	2.00e-94	339.00
IUUC-Tni-120292	Tetraodon nigroviridis	56.06	1.00e-129	456.00
IUUC-Tbe-128087	Tupaia belangeri	73.24	3.00e-137	481.00
IUUC-Ttr-128489	Tursiops truncatus	76.48	0.00e+00	644.00
IUUC-Vpa-130640	Vicugna pacos	67.06	3.00e-153	534.00
IUUC-Xtr-132352	Xenopus tropicalis	60.10	2.00e-136	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence