iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098343

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01332124

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000020663.2	ENSPPYT00000024101.2	ENSPPYP00000023131.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	35.5	519	557
E3 activity/RING/U-box	2.60e-11	43.5	516	574

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+  f + p+++pCgH+f+++Cl++          +++CPlC+
   Q: 519  CALCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNAKCPLCK 557
           ****999977.***************999......9*********7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrli 65
           ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++  l ++ lv  +  +++i
   Q: 516  DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAK-CPLCKDGL-SQCLVSRKYSKNVI 574
           678*********************************9.****9988.55555555555555 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MESVRTEQML SLPAEVSSDN LEPAERGASA AQVDMGPHPK VAAEGPAPLP TREPEQEQSP 60
GTSTPESKVL LTQADALASR GRIREALEVY RQLSERQQLV AEQLEQLVRC LAEKVPQGEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTAGGCGGC GCGGGGCGGC CGGCATGGAG CTCCCGGAGG CGCGGCAGGG TCAGGAGCTC 60
GGTGGCACGG CGGCGGTGGC TGCCCCGATT TCCTCCAGCT GCCACTCCTT GCTTCGTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000755	Aegilops tauschii	30.53	2.00e-11	63.50
IUUC-Aml-001774	Ailuropoda melanoleuca	71.34	0.00e+00	966.00
IUUC-Apl-003916	Anas platyrhynchos	72.53	5.00e-161	560.00
IUUC-Ame-010881	Astyanax mexicanus	48.59	5.00e-178	617.00
IUUC-Bta-012872	Bos taurus	81.16	0.00e+00	1112.00
IUUC-Cel-018356	Caenorhabditis elegans	32.53	1.00e-09	55.50
IUUC-Cja-018747	Callithrix jacchus	88.54	0.00e+00	725.00
IUUC-Cfa-020101	Canis familiaris	78.75	0.00e+00	1081.00
IUUC-Cpo-022041	Cavia porcellus	71.95	0.00e+00	976.00
IUUC-Csa-024034	Chlorocebus sabaeus	91.37	0.00e+00	1336.00
IUUC-Csv-026364	Ciona savignyi	45.54	2.00e-79	288.00
IUUC-Dno-029518	Dasypus novemcinctus	83.16	0.00e+00	1127.00
IUUC-Dor-031132	Dipodomys ordii	65.92	0.00e+00	969.00
IUUC-Dse-031331	Dothistroma septosporum	31.91	2.00e-39	156.00
IUUC-Dme-031919	Drosophila melanogaster	28.68	2.00e-66	247.00
IUUC-Eca-033382	Equus caballus	82.49	0.00e+00	1200.00
IUUC-Fca-035777	Felis catus	85.91	0.00e+00	831.00
IUUC-Fal-036730	Ficedula albicollis	65.99	0.00e+00	718.00
IUUC-Gmo-039110	Gadus morhua	68.46	4.00e-126	445.00
IUUC-Gga-041187	Gallus gallus	59.38	0.00e+00	888.00
IUUC-Gac-042201	Gasterosteus aculeatus	66.36	8.00e-135	474.00
IUUC-Ggo-045111	Gorilla gorilla	92.60	0.00e+00	1342.00
IUUC-Hsa-045695	Homo sapiens	92.48	0.00e+00	1339.00
IUUC-Lch-050429	Latimeria chalumnae	52.92	0.00e+00	764.00
IUUC-Lma-053145	Leptosphaeria maculans	31.85	4.00e-41	162.00
IUUC-Laf-053434	Loxodonta africana	79.33	0.00e+00	872.00
IUUC-Mcc-055249	Macaca mulatta	98.61	0.00e+00	979.00
IUUC-Mga-060131	Meleagris gallopavo	63.40	0.00e+00	669.00
IUUC-Mvi-060228	Microbotryum violaceum	34.38	3.00e-47	183.00
IUUC-Mmr-060749	Microcebus murinus	82.94	0.00e+00	1221.00
IUUC-Mdo-062261	Monodelphis domestica	69.41	2.00e-150	525.00
IUUC-Mmu-063219	Mus musculus	74.75	0.00e+00	1055.00
IUUC-Mpu-066222	Mustela putorius furo	70.59	0.00e+00	967.00
IUUC-Mlu-067769	Myotis lucifugus	77.83	0.00e+00	1095.00
IUUC-Nle-069738	Nomascus leucogenys	89.76	0.00e+00	1040.00
IUUC-Oan-073179	Ornithorhynchus anatinus	68.09	0.00e+00	687.00
IUUC-Ocu-074884	Oryctolagus cuniculus	79.14	0.00e+00	1078.00
IUUC-Ogl-077658	Oryza glaberrima	34.04	4.00e-12	65.90
IUUC-Ome-081482	Oryza meridionalis	34.04	6.00e-12	65.10
IUUC-Osa-085978	Oryza sativa	34.04	4.00e-12	65.90
IUUC-Ola-086534	Oryzias latipes	61.99	2.00e-133	469.00
IUUC-Oga-089109	Otolemur garnettii	79.22	0.00e+00	1110.00
IUUC-Oar-089903	Ovis aries	81.65	0.00e+00	1125.00
IUUC-Ptr-091238	Pan troglodytes	91.84	0.00e+00	1324.00
IUUC-Pan-092379	Papio anubis	97.53	0.00e+00	1472.00
IUUC-Psi-093418	Pelodiscus sinensis	73.68	2.00e-163	569.00
IUUC-Pma-094231	Petromyzon marinus	63.24	7.00e-110	389.00
IUUC-Pno-094889	Phaeosphaeria nodorum	38.68	5.00e-41	161.00
IUUC-Pfo-097284	Poecilia formosa	47.31	0.00e+00	626.00
IUUC-Pca-100905	Procavia capensis	76.06	0.00e+00	965.00
IUUC-Pva-102242	Pteropus vampyrus	75.40	0.00e+00	1053.00
IUUC-Ptt-103898	Puccinia triticina	26.59	6.00e-29	122.00
IUUC-Pte-104214	Pyrenophora teres	29.30	2.00e-39	156.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	31.34	5.00e-39	155.00
IUUC-Rno-105899	Rattus norvegicus	81.50	0.00e+00	1206.00
IUUC-Sha-107565	Sarcophilus harrisii	47.01	0.00e+00	640.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	36.89	8.00e-31	128.00
IUUC-Spo-108344	Schizosaccharomyces pombe	35.53	4.00e-25	109.00
IUUC-Sar-112999	Sorex araneus	65.27	1.00e-132	466.00
IUUC-Ssc-115705	Sus scrofa	81.67	0.00e+00	1159.00
IUUC-Tgu-116978	Taeniopygia guttata	59.85	0.00e+00	774.00
IUUC-Tsy-118988	Tarsius syrichta	84.06	0.00e+00	920.00
IUUC-Tbe-127563	Tupaia belangeri	70.94	4.00e-145	507.00
IUUC-Ttr-128875	Tursiops truncatus	80.76	0.00e+00	1060.00
IUUC-Vpa-130779	Vicugna pacos	95.12	7.00e-159	553.00
IUUC-Xtr-132508	Xenopus tropicalis	49.27	0.00e+00	710.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence