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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105339
Ensembl Protein ID ENSRNOP00000025378.2
UniProt Accession D3ZX15; D3ZX15_RAT
Genbank Protein ID EDM00162.1
Protein Name POZ (BTB) and AT hook-containing zinc finger 1; Zinc finger protein 278, isoform CRA_c
Genbank Nucleotide ID AC094950
Gene Name Patz1; Zfp278; rCG_35839
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000018709.7 ENSRNOT00000081161.1 ENSRNOP00000073870.1
ENSRNOG00000018709.7 ENSRNOT00000082242.1 ENSRNOP00000072870.1
ENSRNOG00000018709.7 ENSRNOT00000025378.4 ENSRNOP00000025378.2
ENSRNOG00000018709.7 ENSRNOT00000089928.1 ENSRNOP00000072370.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB 1.10e-13 51.7 41 126
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/BCR/BTB_Other: BTB
   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmelees......................ksklmveikdvqpevfrallkFlYtgkl 65
           +Dv+l vg+e f+ah++vLaa+S++F++ f+ +l ++                        + + e++ ++ +vf ++l+F Yt+++
   Q: 41   CDVLLRVGDESFPAHRAVLAACSEYFESVFSAQLGDGgaadggpadvggaaaapgggagG-SRELEMHTISSKVFGDILDFAYTSRI 126
           8**********************************999********************54.8899999****************997 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MERVNDASCG PSGCYTYQVS RHSTEMLHNL NQQRKNGGRF CDVLLRVGDE SFPAHRAVLA 60
ACSEYFESVF SAQLGDGGAA DGGPADVGGA AAAPGGGAGG SRELEMHTIS SKVFGDILDF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105339|E3,BTB_Other|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGCGCCGCCT GGCGGGCGGG AGGGGAGGTG GCAGCCGCTT TTGCCGGAGG GGCGCACCTC 60
TTCGCTCGTT TACCCCCTGG AAGGTAGACC TAGAGAGGGA GGCGGGCAGG CGGAGAGGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105339|E3,BTB_Other|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR000210--BTB/POZ_dom
IPR023413--GFP-like
IPR000637--HMGI/Y_DNA-bd_CS
IPR004039--Rubredoxin-type_fold
IPR011333--SKP1/BTB/POZ
IPR029037--YfgJ-like
IPR013087--Znf_C2H2_type
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50097--BTB
PS00354--HMGI_Y
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2
Pfam

PF00651--BTB
SMART

SM00225--BTB
SM00355--ZnF_C2H2
Gene Ontology

GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0046872--F:metal ion binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077--F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008584--P:male gonad development
GO:0007283--P:spermatogenesis
GO:0030217--P:T cell differentiation
KEGG rno:305471
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001393 Ailuropoda melanoleuca 92.29 0.00e+00 1156.00
IUUC-Ame-010861 Astyanax mexicanus 54.60 0.00e+00 646.00
IUUC-Bta-012647 Bos taurus 92.43 0.00e+00 1156.00
IUUC-Cja-019987 Callithrix jacchus 91.87 0.00e+00 1124.00
IUUC-Cfa-020091 Canis familiaris 92.43 0.00e+00 1156.00
IUUC-Cpo-021731 Cavia porcellus 91.27 0.00e+00 1140.00
IUUC-Csa-023323 Chlorocebus sabaeus 99.20 0.00e+00 943.00
IUUC-Cho-024339 Choloepus hoffmanni 96.64 2.00e-104 373.00
IUUC-Dre-028776 Danio rerio 58.23 0.00e+00 672.00
IUUC-Dno-028988 Dasypus novemcinctus 91.11 0.00e+00 1053.00
IUUC-Eca-034224 Equus caballus 98.91 0.00e+00 1184.00
IUUC-Fca-035834 Felis catus 99.06 0.00e+00 1177.00
IUUC-Gmo-038564 Gadus morhua 52.16 0.00e+00 634.00
IUUC-Gga-040923 Gallus gallus 82.01 0.00e+00 1038.00
IUUC-Gac-042115 Gasterosteus aculeatus 53.38 0.00e+00 671.00
IUUC-Ggo-045483 Gorilla gorilla 92.58 0.00e+00 1163.00
IUUC-Hsa-045831 Homo sapiens 92.43 0.00e+00 1135.00
IUUC-Itr-048966 Ictidomys tridecemlineatus 92.14 0.00e+00 1153.00
IUUC-Lch-050298 Latimeria chalumnae 65.71 0.00e+00 824.00
IUUC-Laf-053714 Loxodonta africana 91.70 0.00e+00 1159.00
IUUC-Mcc-055844 Macaca mulatta 86.58 0.00e+00 971.00
IUUC-Mmr-061004 Microcebus murinus 89.29 0.00e+00 1107.00
IUUC-Mdo-061816 Monodelphis domestica 89.72 0.00e+00 993.00
IUUC-Mmu-063774 Mus musculus 92.87 0.00e+00 1159.00
IUUC-Mpu-066238 Mustela putorius furo 99.40 0.00e+00 935.00
IUUC-Mlu-068149 Myotis lucifugus 92.14 0.00e+00 1154.00
IUUC-Opr-071017 Ochotona princeps 88.10 0.00e+00 746.00
IUUC-Ont-072352 Oreochromis niloticus 58.86 0.00e+00 730.00
IUUC-Oan-073423 Ornithorhynchus anatinus 86.79 0.00e+00 1098.00
IUUC-Ocu-074291 Oryctolagus cuniculus 99.00 0.00e+00 937.00
IUUC-Oga-088646 Otolemur garnettii 92.29 0.00e+00 1152.00
IUUC-Oar-089847 Ovis aries 94.85 0.00e+00 1112.00
IUUC-Ptr-091669 Pan troglodytes 92.58 0.00e+00 1163.00
IUUC-Pfo-097307 Poecilia formosa 56.74 0.00e+00 678.00
IUUC-Pab-097693 Pongo abelii 92.29 0.00e+00 1161.00
IUUC-Pca-100274 Procavia capensis 82.83 1.00e-140 493.00
IUUC-Pva-102261 Pteropus vampyrus 92.29 0.00e+00 1156.00
IUUC-Ptt-103895 Puccinia triticina 38.10 7.00e-06 44.70
IUUC-Ssc-116429 Sus scrofa 98.28 0.00e+00 1167.00
IUUC-Tgu-116916 Taeniopygia guttata 88.72 0.00e+00 994.00
IUUC-Tru-117811 Takifugu rubripes 54.82 0.00e+00 681.00
IUUC-Tni-120697 Tetraodon nigroviridis 56.68 0.00e+00 663.00
IUUC-Ttr-128276 Tursiops truncatus 92.29 0.00e+00 1153.00
IUUC-Xtr-131778 Xenopus tropicalis 66.67 0.00e+00 814.00
Created Date 25-Jun-2017

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