iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-062742

Ensembl Protein ID

ENSMODP00000014438.2

UniProt Accession

F6QX91; F6QX91_MONDO

Protein Name

Uncharacterized protein

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000011539.3	ENSMODT00000014704.2	ENSMODP00000014438.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.20e-20	71.7	178	216
ULD/UDP/UBQ/UBQ_PIM	6.90e-26	90.2	15	92

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLld 40
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl 
   Q: 178  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLM 216
           7899*********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f++++++ +tv+ lKeki++e+g   +p++ qkLIyaGkiL+Dd ++++++i+++++v+++v+k+k
   Q: 15   VTVTLKTLQQQTFKIRMEPGETVKVLKEKIEAEKGrdaFPVSGQKLIYAGKILSDDVPIRDYKIDEKNFVVVMVTKAK 92
           68*************************************************************************987 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

RTEAAAARLG PAMAVTVTLK TLQQQTFKIR MEPGETVKVL KEKIEAEKGR DAFPVSGQKL 60
IYAGKILSDD VPIRDYKIDE KNFVVVMVTK AKAGPATSVP PEPSAPASAN TLEPSTPTPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGACGGAAG CCGCCGCCGC CCGCTTGGGC CCAGCCATGG CCGTCACCGT CACCTTGAAG 60
ACGCTGCAGC AACAAACGTT TAAGATCCGC ATGGAGCCAG GGGAGACGGT GAGGCCGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.24	3.00e-35	142.00
IUUC-Aml-001515	Ailuropoda melanoleuca	77.69	2.00e-130	458.00
IUUC-Atr-003116	Amborella trichopoda	41.56	5.00e-34	138.00
IUUC-Aca-004704	Anolis carolinensis	74.67	8.00e-108	383.00
IUUC-Aly-006159	Arabidopsis lyrata	35.55	3.00e-54	205.00
IUUC-Ath-006674	Arabidopsis thaliana	43.33	9.00e-42	164.00
IUUC-Acl-008212	Aspergillus clavatus	35.41	4.00e-27	115.00
IUUC-Afl-008605	Aspergillus flavus	36.08	1.00e-28	120.00
IUUC-Afu-008877	Aspergillus fumigatus	34.40	3.00e-25	109.00
IUUC-Ani-009460	Aspergillus nidulans	38.93	7.00e-31	127.00
IUUC-Aor-010032	Aspergillus oryzae	36.08	2.00e-28	120.00
IUUC-Ate-010458	Aspergillus terreus	39.84	4.00e-31	129.00
IUUC-Ame-011342	Astyanax mexicanus	65.14	8.00e-62	230.00
IUUC-Bgr-012056	Blumeria graminis	33.49	4.00e-37	148.00
IUUC-Bta-012377	Bos taurus	82.79	9.00e-137	479.00
IUUC-Bci-013933	Botrytis cinerea	50.00	3.00e-20	92.80
IUUC-Bdi-014253	Brachypodium distachyon	38.24	4.00e-36	145.00
IUUC-Bol-015272	Brassica oleracea	34.62	2.00e-53	202.00
IUUC-Bra-016970	Brassica rapa	35.48	1.00e-53	203.00
IUUC-Cel-018364	Caenorhabditis elegans	37.68	1.00e-21	97.10
IUUC-Cja-018946	Callithrix jacchus	82.26	6.00e-129	453.00
IUUC-Cfa-020577	Canis familiaris	83.61	6.00e-143	500.00
IUUC-Cpo-021850	Cavia porcellus	80.90	6.00e-150	523.00
IUUC-Csa-023183	Chlorocebus sabaeus	83.11	2.00e-137	481.00
IUUC-Cin-025741	Ciona intestinalis	45.27	5.00e-40	157.00
IUUC-Cme-027260	Cyanidioschyzon merolae	26.56	4.00e-25	108.00
IUUC-Dre-028209	Danio rerio	70.41	6.00e-72	264.00
IUUC-Dno-030017	Dasypus novemcinctus	80.11	4.00e-119	421.00
IUUC-Dor-030358	Dipodomys ordii	74.93	3.00e-111	395.00
IUUC-Dse-031336	Dothistroma septosporum	51.18	1.00e-18	87.40
IUUC-Dme-032027	Drosophila melanogaster	37.67	3.00e-61	229.00
IUUC-Eca-033599	Equus caballus	80.17	1.00e-121	429.00
IUUC-Fca-036051	Felis catus	83.06	1.00e-141	495.00
IUUC-Fox-037960	Fusarium oxysporum	50.76	1.00e-18	87.40
IUUC-Fso-038107	Fusarium solani	51.54	2.00e-18	86.30
IUUC-Gmo-038528	Gadus morhua	69.27	7.00e-73	267.00
IUUC-Ggr-040116	Gaeumannomyces graminis	52.27	9.00e-19	87.80
IUUC-Gac-042298	Gasterosteus aculeatus	61.58	3.00e-93	335.00
IUUC-Gma-044245	Glycine max	35.79	1.00e-54	207.00
IUUC-Ggo-045084	Gorilla gorilla	83.33	4.00e-140	491.00
IUUC-Hsa-046614	Homo sapiens	83.38	3.00e-138	484.00
IUUC-Hvu-047832	Hordeum vulgare	37.82	2.00e-35	143.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	81.72	4.00e-146	510.00
IUUC-Lch-050563	Latimeria chalumnae	61.19	5.00e-104	370.00
IUUC-Lpe-051087	Leersia perrieri	37.50	4.00e-36	145.00
IUUC-Loc-051758	Lepisosteus oculatus	63.75	3.00e-91	328.00
IUUC-Laf-054589	Loxodonta africana	82.29	1.00e-130	459.00
IUUC-Mcc-055860	Macaca mulatta	83.11	2.00e-137	481.00
IUUC-Meu-056459	Macropus eugenii	95.75	7.00e-145	506.00
IUUC-Mor-057287	Magnaporthe oryzae	48.36	4.00e-16	79.00
IUUC-Mpo-057609	Magnaporthe poae	51.18	5.00e-17	81.60
IUUC-Mtr-058239	Medicago truncatula	32.55	7.00e-50	191.00
IUUC-Mla-058961	Melampsora laricipopulina	44.36	2.00e-24	107.00
IUUC-Mvi-060220	Microbotryum violaceum	42.11	2.00e-21	97.10
IUUC-Mmr-060819	Microcebus murinus	83.88	4.00e-143	500.00
IUUC-Mmu-063929	Mus musculus	83.11	2.00e-140	491.00
IUUC-Mac-065180	Musa acuminata	41.08	1.00e-39	157.00
IUUC-Mpu-066684	Mustela putorius furo	83.11	3.00e-142	498.00
IUUC-Mlu-067787	Myotis lucifugus	79.47	9.00e-131	459.00
IUUC-Nfi-068390	Neosartorya fischeri	34.40	3.00e-25	108.00
IUUC-Nle-069846	Nomascus leucogenys	73.50	2.00e-119	422.00
IUUC-Ont-072271	Oreochromis niloticus	57.32	4.00e-90	325.00
IUUC-Oan-073572	Ornithorhynchus anatinus	79.51	2.00e-135	474.00
IUUC-Oba-075392	Oryza barthii	36.69	1.00e-34	140.00
IUUC-Obr-076909	Oryza brachyantha	37.55	2.00e-38	152.00
IUUC-Ogu-078896	Oryza glumaepatula	35.52	2.00e-32	133.00
IUUC-Olo-080929	Oryza longistaminata	36.69	7.00e-35	141.00
IUUC-Ome-081866	Oryza meridionalis	36.69	9.00e-35	140.00
IUUC-Oni-083092	Oryza nivara	36.69	9.00e-35	140.00
IUUC-Opu-083963	Oryza punctata	40.09	1.00e-38	153.00
IUUC-Oru-084816	Oryza rufipogon	36.69	9.00e-35	140.00
IUUC-Ola-086474	Oryzias latipes	59.53	2.00e-67	249.00
IUUC-Olu-087843	Ostreococcus lucimarinus	38.36	5.00e-39	154.00
IUUC-Oga-089075	Otolemur garnettii	83.56	9.00e-134	469.00
IUUC-Oar-090387	Ovis aries	81.50	5.00e-134	470.00
IUUC-Ptr-090912	Pan troglodytes	80.11	4.00e-128	450.00
IUUC-Pan-092140	Papio anubis	81.79	2.00e-139	488.00
IUUC-Psi-093347	Pelodiscus sinensis	73.52	2.00e-75	275.00
IUUC-Ppa-095654	Physcomitrella patens	41.63	1.00e-39	157.00
IUUC-Pfo-096607	Poecilia formosa	62.43	7.00e-96	343.00
IUUC-Pab-097738	Pongo abelii	79.84	1.00e-127	449.00
IUUC-Pop-099642	Populus trichocarpa	36.32	2.00e-54	206.00
IUUC-Pca-100348	Procavia capensis	78.26	7.00e-132	463.00
IUUC-Ppe-101830	Prunus persica	37.86	1.00e-37	150.00
IUUC-Pva-102412	Pteropus vampyrus	82.29	1.00e-139	489.00
IUUC-Pgr-103618	Puccinia graminis	35.52	1.00e-23	103.00
IUUC-Ptt-103717	Puccinia triticina	49.24	5.00e-29	122.00
IUUC-Pte-104303	Pyrenophora teres	51.94	7.00e-21	94.70
IUUC-Pyt-104580	Pyrenophora triticirepentis	51.94	9.00e-21	94.40
IUUC-Rno-105569	Rattus norvegicus	82.51	3.00e-139	487.00
IUUC-Sce-106214	Saccharomyces cerevisiae	38.57	3.00e-16	79.30
IUUC-Sha-106918	Sarcophilus harrisii	95.32	4.00e-143	500.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	39.27	1.00e-37	150.00
IUUC-Spo-108298	Schizosaccharomyces pombe	39.51	9.00e-40	157.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	45.45	3.00e-18	85.90
IUUC-Smo-109518	Selaginella moellendorffii	38.40	3.00e-32	132.00
IUUC-Sit-109813	Setaria italica	40.77	6.00e-39	154.00
IUUC-Sly-111899	Solanum lycopersicum	35.48	2.00e-56	213.00
IUUC-Stu-112054	Solanum tuberosum	42.86	7.00e-42	164.00
IUUC-Sbi-114459	Sorghum bicolor	39.24	1.00e-38	153.00
IUUC-Ssc-115460	Sus scrofa	81.99	1.00e-137	482.00
IUUC-Tgu-116508	Taeniopygia guttata	87.50	4.00e-29	118.00
IUUC-Tsy-119385	Tarsius syrichta	95.12	2.00e-41	161.00
IUUC-Tni-120493	Tetraodon nigroviridis	72.09	4.00e-80	291.00
IUUC-Tca-121594	Theobroma cacao	35.22	4.00e-50	191.00
IUUC-Tre-121911	Trichoderma reesei	40.89	1.00e-28	120.00
IUUC-Tvi-122617	Trichoderma virens	39.75	2.00e-28	120.00
IUUC-Tae-125354	Triticum aestivum	37.82	1.00e-35	144.00
IUUC-Tur-126610	Triticum urartu	38.24	1.00e-35	144.00
IUUC-Tme-127092	Tuber melanosporum	35.35	2.00e-24	106.00
IUUC-Tbe-127603	Tupaia belangeri	83.21	3.00e-57	215.00
IUUC-Ttr-129232	Tursiops truncatus	93.49	2.00e-96	345.00
IUUC-Vda-129946	Verticillium dahliae	48.48	5.00e-19	89.00
IUUC-Vvi-131039	Vitis vinifera	41.08	9.00e-44	171.00
IUUC-Xma-133647	Xiphophorus maculatus	75.81	7.00e-72	264.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence