iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115263

Ensembl Protein ID

ENSSSCP00000008501.2

UniProt Accession

F1RHL8; F1RHL8_PIG

Genbank Protein ID

ENSSSCP00000008501

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP103025

Gene Name

SNRNP25

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000007962.2	ENSSSCT00000008725.2	ENSSSCP00000008501.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	6.70e-06	26.2	32	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKeki..............ekk.lgippeqqrLiykGkiL.eddktLadyglkdgst 66
           ++v+v  +dg ++++ v   +tV++LK+ i              ++  +++ ++  +L+ +G+ L ed k+L dyg+++++ 
   Q: 32   MTVRVCKTDGEVMPVVVVQNATVLDLKKAIqryvqlrqereggvQHIsWSYVWRTYHLMAAGEKLtEDRKKLRDYGIRNRDE 113
           578888899************************999999999986666999988889999999999***********99886 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MVVQDPLLCD LPIQVTLEEV NSQIALEYGQ AMTVRVCKTD GEVMPVVVVQ NATVLDLKKA 60
IQRYVQLRQE REGGVQHISW SYVWRTYHLM AAGEKLTEDR KKLRDYGIRN RDEVSFIKKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NTACGAANGA GGACGGGGAG TTTTCAGAGG GTCTGGCCAT 60
GGTGGTGCAG GACCCGCTGC TCTGCGACCT TCCGATCCAG GTGCGCATGG GTCGGGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom

KEGG

ssc:100517703

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-013418	Bos taurus	96.75	1.00e-67	247.00
IUUC-Bci-013773	Botrytis cinerea	41.94	3.00e-02	32.00
IUUC-Cja-019542	Callithrix jacchus	95.12	1.00e-66	244.00
IUUC-Cpo-021791	Cavia porcellus	96.75	2.00e-67	247.00
IUUC-Cin-025440	Ciona intestinalis	60.66	1.00e-40	158.00
IUUC-Dre-028229	Danio rerio	78.86	4.00e-58	216.00
IUUC-Eca-033616	Equus caballus	96.75	1.00e-67	248.00
IUUC-Gac-041795	Gasterosteus aculeatus	77.05	2.00e-55	207.00
IUUC-Ggo-045439	Gorilla gorilla	95.12	1.00e-66	244.00
IUUC-Hsa-045948	Homo sapiens	95.12	1.00e-66	244.00
IUUC-Itr-048331	Ictidomys tridecemlineatus	95.93	3.00e-67	246.00
IUUC-Lch-050068	Latimeria chalumnae	79.67	4.00e-57	213.00
IUUC-Mcc-054809	Macaca mulatta	94.31	2.00e-66	243.00
IUUC-Mmu-063172	Mus musculus	96.75	2.00e-67	246.00
IUUC-Mac-065187	Musa acuminata	35.16	6.00e-09	53.90
IUUC-Ocu-074308	Oryctolagus cuniculus	94.31	3.00e-66	243.00
IUUC-Oga-089042	Otolemur garnettii	96.75	2.00e-67	247.00
IUUC-Oar-089400	Ovis aries	95.93	4.00e-67	245.00
IUUC-Ptr-091264	Pan troglodytes	95.12	1.00e-66	244.00
IUUC-Pan-092931	Papio anubis	94.31	2.00e-66	243.00
IUUC-Pfo-097322	Poecilia formosa	77.87	3.00e-55	207.00
IUUC-Pab-098273	Pongo abelii	95.12	1.00e-66	244.00
IUUC-Rno-105525	Rattus norvegicus	96.75	2.00e-67	246.00
IUUC-Ssl-108605	Sclerotinia sclerotiorum	45.16	5.00e-03	34.70
IUUC-Sly-110960	Solanum lycopersicum	33.33	2.00e-10	58.50
IUUC-Stu-112094	Solanum tuberosum	30.34	4.00e-08	51.60
IUUC-Tru-117994	Takifugu rubripes	77.05	6.00e-54	202.00
IUUC-Tni-120742	Tetraodon nigroviridis	78.69	8.00e-56	208.00
IUUC-Xtr-132218	Xenopus tropicalis	80.49	4.00e-59	219.00
IUUC-Xma-133570	Xiphophorus maculatus	77.05	9.00e-55	205.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence