iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115907

Ensembl Protein ID

ENSSSCP00000016632.2

UniProt Accession

F1S0D8; F1S0D8_PIG

Genbank Protein ID

ENSSSCP00000016632

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU856241

Gene Name

UBXN4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000015690.2	ENSSSCT00000017090.2	ENSSSCP00000016632.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	9.50e-19	68.0	290	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 2    tteqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsllv 79
           +++ a++q+RlpdG+ ++++Fps+++le+ +qf ++  ++   +F+L + fPrr++++e++++ l +++L+ps+s+++
   Q: 290  RSSVARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVVL 367
           5679***********************************************************************986 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

GDDEQSTQMA ASWEDDKVTE ASSNNFVAIK IDTKSEACLQ FSQIYPVVCV PSSFFIGDSG 60
IPLEVIAGSV SADELVSRIH KVQQMHTLKG ETSVANGSQS ESSVSTPSNS SEHNNTSENC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGAATCA TTAGATACTG GTTCTATGTT TTAAGAATGC TTAATGTTTT ACAGGTGATG 60
ATGAGCAGTC TACACAGATG GCTGCAAGTT GGGAAGATGA CAAGGTGACA GAAGCATCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR012336--Thioredoxin-like_fold
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS50033--UBX

Pfam

PF00789--UBX

SMART

SM00166--UBX

Gene Ontology

GO:0005829--C:cytosol
GO:0005783--C:endoplasmic reticulum
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000602	Aegilops tauschii	24.77	2.00e-08	53.50
IUUC-Aml-001998	Ailuropoda melanoleuca	97.76	7.00e-93	332.00
IUUC-Apl-003590	Anas platyrhynchos	77.90	1.00e-96	346.00
IUUC-Aca-005239	Anolis carolinensis	67.75	1.00e-146	512.00
IUUC-Ath-007102	Arabidopsis thaliana	32.53	6.00e-07	48.90
IUUC-Ago-007968	Ashbya gossypii	27.06	1.00e-03	37.00
IUUC-Ame-010667	Astyanax mexicanus	48.62	2.00e-101	362.00
IUUC-Bta-012601	Bos taurus	93.36	0.00e+00	686.00
IUUC-Bdi-015056	Brachypodium distachyon	22.73	1.00e-06	48.10
IUUC-Cel-018205	Caenorhabditis elegans	26.28	2.00e-13	70.10
IUUC-Cja-018874	Callithrix jacchus	86.57	0.00e+00	685.00
IUUC-Cfa-021091	Canis familiaris	93.14	0.00e+00	671.00
IUUC-Cpo-021590	Cavia porcellus	80.17	2.00e-180	624.00
IUUC-Csa-023978	Chlorocebus sabaeus	89.63	0.00e+00	647.00
IUUC-Cho-024553	Choloepus hoffmanni	78.75	1.00e-144	506.00
IUUC-Cin-025438	Ciona intestinalis	33.87	6.00e-21	94.00
IUUC-Csv-025905	Ciona savignyi	33.51	6.00e-18	83.60
IUUC-Cgl-026427	Colletotrichum gloeosporioides	27.17	1.00e-05	44.30
IUUC-Dre-027410	Danio rerio	56.98	2.00e-19	87.00
IUUC-Dno-029341	Dasypus novemcinctus	83.09	0.00e+00	630.00
IUUC-Dor-030260	Dipodomys ordii	66.76	6.00e-90	323.00
IUUC-Dme-031927	Drosophila melanogaster	40.48	1.00e-11	64.70
IUUC-Ete-032704	Echinops telfairi	68.83	1.00e-84	306.00
IUUC-Eca-033338	Equus caballus	93.15	0.00e+00	667.00
IUUC-Eeu-034735	Erinaceus europaeus	76.35	3.00e-153	534.00
IUUC-Fca-035445	Felis catus	85.45	0.00e+00	647.00
IUUC-Fal-037033	Ficedula albicollis	71.46	2.00e-143	501.00
IUUC-Fox-037707	Fusarium oxysporum	29.05	4.00e-10	58.90
IUUC-Fso-038439	Fusarium solani	29.30	2.00e-06	46.60
IUUC-Gmo-038720	Gadus morhua	60.57	6.00e-67	248.00
IUUC-Gga-040965	Gallus gallus	71.22	5.00e-145	507.00
IUUC-Gac-041907	Gasterosteus aculeatus	59.51	3.00e-61	228.00
IUUC-Ggo-044983	Gorilla gorilla	76.34	1.00e-144	506.00
IUUC-Hsa-047003	Homo sapiens	90.66	0.00e+00	656.00
IUUC-Hvu-047128	Hordeum vulgare	22.57	5.00e-09	55.50
IUUC-Itr-047924	Ictidomys tridecemlineatus	93.62	2.00e-116	411.00
IUUC-Lch-049859	Latimeria chalumnae	60.68	4.00e-127	447.00
IUUC-Lpe-050823	Leersia perrieri	24.34	1.00e-10	61.20
IUUC-Loc-052883	Lepisosteus oculatus	68.05	1.00e-75	276.00
IUUC-Laf-053624	Loxodonta africana	90.46	3.00e-180	624.00
IUUC-Mcc-055456	Macaca mulatta	89.63	0.00e+00	647.00
IUUC-Meu-056658	Macropus eugenii	67.01	5.00e-139	487.00
IUUC-Mga-059234	Meleagris gallopavo	70.78	5.00e-141	493.00
IUUC-Mmr-060821	Microcebus murinus	91.51	0.00e+00	690.00
IUUC-Mdo-062524	Monodelphis domestica	81.89	0.00e+00	626.00
IUUC-Mmu-064283	Mus musculus	85.48	0.00e+00	626.00
IUUC-Mpu-066521	Mustela putorius furo	92.10	0.00e+00	659.00
IUUC-Mlu-067190	Myotis lucifugus	89.60	0.00e+00	636.00
IUUC-Nle-069046	Nomascus leucogenys	89.63	6.00e-179	620.00
IUUC-Opr-071030	Ochotona princeps	76.44	4.00e-58	218.00
IUUC-Ont-072301	Oreochromis niloticus	65.37	1.00e-75	276.00
IUUC-Oan-073577	Ornithorhynchus anatinus	65.66	4.00e-131	461.00
IUUC-Ocu-074086	Oryctolagus cuniculus	91.68	0.00e+00	665.00
IUUC-Oba-075038	Oryza barthii	26.67	5.00e-10	58.90
IUUC-Obr-076558	Oryza brachyantha	25.76	2.00e-11	63.90
IUUC-Ogl-077635	Oryza glaberrima	26.67	5.00e-10	58.90
IUUC-Ogu-078069	Oryza glumaepatula	26.67	2.00e-09	57.00
IUUC-Oin-079112	Oryza indica	26.67	5.00e-10	58.90
IUUC-Olo-080902	Oryza longistaminata	26.67	5.00e-10	58.90
IUUC-Ome-081339	Oryza meridionalis	26.22	8.00e-10	58.20
IUUC-Oni-083032	Oryza nivara	26.67	5.00e-10	58.90
IUUC-Opu-083735	Oryza punctata	23.66	4.00e-07	49.70
IUUC-Oru-084847	Oryza rufipogon	26.22	4.00e-10	58.90
IUUC-Osa-085514	Oryza sativa	26.22	4.00e-10	59.30
IUUC-Ola-087011	Oryzias latipes	63.56	4.00e-41	160.00
IUUC-Oga-089165	Otolemur garnettii	78.51	0.00e+00	639.00
IUUC-Oar-089397	Ovis aries	84.65	0.00e+00	654.00
IUUC-Ptr-091568	Pan troglodytes	87.34	0.00e+00	696.00
IUUC-Pan-092296	Papio anubis	86.86	0.00e+00	678.00
IUUC-Psi-093004	Pelodiscus sinensis	70.41	1.00e-151	529.00
IUUC-Pma-094440	Petromyzon marinus	47.61	4.00e-73	268.00
IUUC-Pno-094996	Phaeosphaeria nodorum	30.00	2.00e-03	36.60
IUUC-Pfo-097131	Poecilia formosa	52.76	5.00e-114	404.00
IUUC-Pab-098365	Pongo abelii	77.55	2.00e-156	545.00
IUUC-Pca-100585	Procavia capensis	92.08	4.00e-105	374.00
IUUC-Pva-102447	Pteropus vampyrus	90.93	5.00e-152	530.00
IUUC-Rno-105184	Rattus norvegicus	86.93	0.00e+00	628.00
IUUC-Sha-107366	Sarcophilus harrisii	80.41	0.00e+00	632.00
IUUC-Sar-113335	Sorex araneus	67.57	5.00e-136	477.00
IUUC-Tgu-116959	Taeniopygia guttata	71.87	2.00e-141	495.00
IUUC-Tru-117812	Takifugu rubripes	58.87	2.00e-71	262.00
IUUC-Tsy-118965	Tarsius syrichta	91.85	3.00e-125	441.00
IUUC-Tni-120776	Tetraodon nigroviridis	56.02	2.00e-69	256.00
IUUC-Tca-121557	Theobroma cacao	27.11	7.00e-05	42.00
IUUC-Tre-122127	Trichoderma reesei	29.37	1.00e-07	51.20
IUUC-Tae-124359	Triticum aestivum	24.43	4.00e-09	56.20
IUUC-Tur-126844	Triticum urartu	24.76	5.00e-08	52.00
IUUC-Tme-127065	Tuber melanosporum	28.67	2.00e-07	49.30
IUUC-Tbe-128049	Tupaia belangeri	93.41	1.00e-36	147.00
IUUC-Ttr-128913	Tursiops truncatus	93.36	0.00e+00	662.00
IUUC-Vpa-130251	Vicugna pacos	92.65	2.00e-164	571.00
IUUC-Vvi-131692	Vitis vinifera	32.26	1.00e-04	41.20
IUUC-Xtr-131944	Xenopus tropicalis	63.29	5.00e-117	414.00
IUUC-Xma-134134	Xiphophorus maculatus	53.59	2.00e-113	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence