iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pte-104304

Ensembl Protein ID

EFQ95723

UniProt Accession

E3REX4; E3REX4_PYRTT

Genbank Protein ID

EFQ95723.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

GL532563

Gene Name

PTT_05277

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTT_05277	EFQ95723	EFQ95723

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	34.95	2.00e-42	170.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pyrenophora teres

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAATDSFLHL ARPLGPAPLG AQPSTAPLNV AIQPQAVFSI LDHSLRRPAE QERVIGTLLG 60
TRSEDGTEIE IRNCYAVPHT ETAEQVEVDM DYQKQMLALH LRANPREVLV GWYATSSDLN 120

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Nucleotide Sequence
(Fasta)

ATGGCCGCTA CCGACTCCTT CCTGCATCTC GCGCGTCCCC TTGGCCCAGC TCCCCTCGGT 60
GCTCAGCCAT CGACTGCCCC GCTGAACGTC GCCATCCAAC CCCAGGTATG CGACAACTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

pte:PTT_05277

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	33.55	6.00e-40	156.00
IUUC-Aml-001527	Ailuropoda melanoleuca	35.53	8.00e-44	169.00
IUUC-Atr-002686	Amborella trichopoda	36.77	7.00e-39	152.00
IUUC-Apl-003977	Anas platyrhynchos	34.21	1.00e-37	147.00
IUUC-Aca-004335	Anolis carolinensis	34.19	1.00e-43	168.00
IUUC-Aly-005945	Arabidopsis lyrata	36.13	4.00e-41	159.00
IUUC-Ath-007045	Arabidopsis thaliana	35.04	5.00e-40	156.00
IUUC-Acl-008365	Aspergillus clavatus	78.18	6.00e-146	508.00
IUUC-Afl-008742	Aspergillus flavus	76.70	3.00e-140	489.00
IUUC-Afu-009030	Aspergillus fumigatus	78.83	1.00e-147	513.00
IUUC-Ani-009212	Aspergillus nidulans	78.96	2.00e-148	516.00
IUUC-Ang-009712	Aspergillus niger	76.87	3.00e-143	499.00
IUUC-Aor-009885	Aspergillus oryzae	76.70	3.00e-145	506.00
IUUC-Ate-010315	Aspergillus terreus	77.52	3.00e-139	486.00
IUUC-Ame-010801	Astyanax mexicanus	44.21	4.00e-18	83.20
IUUC-Bgr-011982	Blumeria graminis	68.06	8.00e-129	451.00
IUUC-Bta-012804	Bos taurus	35.42	3.00e-44	170.00
IUUC-Bci-013891	Botrytis cinerea	73.16	6.00e-132	461.00
IUUC-Bdi-014328	Brachypodium distachyon	32.98	1.00e-36	144.00
IUUC-Bol-015446	Brassica oleracea	36.36	7.00e-43	165.00
IUUC-Bra-016862	Brassica rapa	36.36	7.00e-43	165.00
IUUC-Cel-018171	Caenorhabditis elegans	26.03	8.00e-28	115.00
IUUC-Cja-019335	Callithrix jacchus	35.53	9.00e-44	169.00
IUUC-Cfa-020138	Canis familiaris	35.53	7.00e-44	169.00
IUUC-Cpo-022109	Cavia porcellus	35.00	6.00e-38	149.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	34.95	6.00e-46	175.00
IUUC-Csa-023994	Chlorocebus sabaeus	35.53	8.00e-44	169.00
IUUC-Cho-024351	Choloepus hoffmanni	27.84	1.00e-21	95.90
IUUC-Cin-025801	Ciona intestinalis	35.97	9.00e-48	182.00
IUUC-Csv-025805	Ciona savignyi	34.53	7.00e-45	172.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	62.78	1.00e-114	404.00
IUUC-Cne-026868	Cryptococcus neoformans	33.94	2.00e-42	164.00
IUUC-Cme-027328	Cyanidioschyzon merolae	25.16	2.00e-13	68.20
IUUC-Dre-028085	Danio rerio	35.77	2.00e-46	177.00
IUUC-Dno-030099	Dasypus novemcinctus	35.53	1.00e-43	168.00
IUUC-Dor-030324	Dipodomys ordii	31.87	5.00e-33	133.00
IUUC-Dse-031314	Dothistroma septosporum	80.88	5.00e-155	538.00
IUUC-Dme-031926	Drosophila melanogaster	30.82	4.00e-38	149.00
IUUC-Ete-032569	Echinops telfairi	32.99	3.00e-38	150.00
IUUC-Eca-033502	Equus caballus	33.33	6.00e-41	159.00
IUUC-Eeu-034883	Erinaceus europaeus	27.37	4.00e-13	65.90
IUUC-Fca-035873	Felis catus	35.53	1.00e-43	168.00
IUUC-Fal-036921	Ficedula albicollis	36.03	1.00e-46	177.00
IUUC-Fox-037765	Fusarium oxysporum	62.99	1.00e-112	397.00
IUUC-Fso-038240	Fusarium solani	63.31	4.00e-114	402.00
IUUC-Gmo-038864	Gadus morhua	35.53	2.00e-45	174.00
IUUC-Ggr-039862	Gaeumannomyces graminis	59.02	4.00e-101	359.00
IUUC-Gga-040952	Gallus gallus	36.03	2.00e-46	177.00
IUUC-Gac-041677	Gasterosteus aculeatus	33.22	1.00e-45	174.00
IUUC-Gma-043061	Glycine max	36.20	1.00e-38	151.00
IUUC-Ggo-045591	Gorilla gorilla	35.53	7.00e-44	169.00
IUUC-Hsa-046860	Homo sapiens	35.53	8.00e-44	169.00
IUUC-Hvu-047410	Hordeum vulgare	29.93	6.00e-18	81.60
IUUC-Itr-048211	Ictidomys tridecemlineatus	35.53	1.00e-43	168.00
IUUC-Lch-049410	Latimeria chalumnae	33.96	3.00e-25	106.00
IUUC-Lpe-051102	Leersia perrieri	34.33	1.00e-38	151.00
IUUC-Loc-052016	Lepisosteus oculatus	31.52	3.00e-32	130.00
IUUC-Lma-053157	Leptosphaeria maculans	93.75	0.00e+00	624.00
IUUC-Laf-054568	Loxodonta africana	35.53	1.00e-43	168.00
IUUC-Mcc-054613	Macaca mulatta	35.53	7.00e-44	169.00
IUUC-Meu-056832	Macropus eugenii	30.71	1.00e-15	74.70
IUUC-Mor-057104	Magnaporthe oryzae	59.15	2.00e-106	377.00
IUUC-Mtr-058445	Medicago truncatula	36.23	2.00e-47	180.00
IUUC-Mla-059038	Melampsora laricipopulina	41.03	2.00e-55	207.00
IUUC-Mga-059548	Meleagris gallopavo	34.60	1.00e-40	157.00
IUUC-Mvi-060520	Microbotryum violaceum	35.67	2.00e-39	154.00
IUUC-Mdo-062376	Monodelphis domestica	35.40	1.00e-44	171.00
IUUC-Mmu-063254	Mus musculus	35.53	1.00e-43	168.00
IUUC-Mac-065635	Musa acuminata	35.40	3.00e-40	157.00
IUUC-Mpu-066314	Mustela putorius furo	35.53	8.00e-44	169.00
IUUC-Mlu-067512	Myotis lucifugus	35.16	7.00e-44	169.00
IUUC-Nfi-068262	Neosartorya fischeri	78.83	1.00e-147	513.00
IUUC-Ncr-068872	Neurospora crassa	61.18	8.00e-102	362.00
IUUC-Nle-070118	Nomascus leucogenys	35.53	1.00e-43	169.00
IUUC-Opr-071228	Ochotona princeps	33.61	1.00e-38	151.00
IUUC-Ont-072600	Oreochromis niloticus	35.90	9.00e-47	178.00
IUUC-Oan-073584	Ornithorhynchus anatinus	35.02	1.00e-39	154.00
IUUC-Ocu-074542	Oryctolagus cuniculus	35.53	6.00e-44	169.00
IUUC-Oba-075923	Oryza barthii	33.91	4.00e-41	159.00
IUUC-Obr-076313	Oryza brachyantha	34.80	8.00e-41	158.00
IUUC-Ogl-076932	Oryza glaberrima	33.91	4.00e-41	159.00
IUUC-Ogu-078152	Oryza glumaepatula	33.91	4.00e-41	159.00
IUUC-Oin-079528	Oryza indica	33.91	4.00e-41	159.00
IUUC-Olo-080401	Oryza longistaminata	33.91	4.00e-41	159.00
IUUC-Ome-081553	Oryza meridionalis	33.91	3.00e-41	160.00
IUUC-Oni-082090	Oryza nivara	33.91	1.00e-41	161.00
IUUC-Opu-083583	Oryza punctata	34.46	4.00e-39	153.00
IUUC-Oru-084492	Oryza rufipogon	33.91	4.00e-41	159.00
IUUC-Osa-085383	Oryza sativa	33.91	4.00e-41	159.00
IUUC-Ola-086835	Oryzias latipes	36.26	6.00e-47	179.00
IUUC-Olu-087716	Ostreococcus lucimarinus	27.84	3.00e-23	100.00
IUUC-Oga-088886	Otolemur garnettii	35.53	4.00e-44	170.00
IUUC-Oar-090079	Ovis aries	35.42	2.00e-44	170.00
IUUC-Ptr-091457	Pan troglodytes	35.53	8.00e-44	169.00
IUUC-Pan-092317	Papio anubis	32.11	3.00e-22	96.30
IUUC-Psi-093129	Pelodiscus sinensis	34.34	4.00e-41	159.00
IUUC-Pma-094488	Petromyzon marinus	35.02	5.00e-50	189.00
IUUC-Pno-095049	Phaeosphaeria nodorum	95.86	0.00e+00	625.00
IUUC-Ppa-095341	Physcomitrella patens	37.73	1.00e-51	194.00
IUUC-Pfo-096286	Poecilia formosa	35.09	1.00e-45	174.00
IUUC-Pab-097765	Pongo abelii	35.53	8.00e-44	169.00
IUUC-Pop-099131	Populus trichocarpa	36.14	2.00e-44	170.00
IUUC-Pca-100524	Procavia capensis	27.73	4.00e-21	93.20
IUUC-Ppe-101934	Prunus persica	37.96	2.00e-49	187.00
IUUC-Pva-102577	Pteropus vampyrus	35.16	2.00e-43	168.00
IUUC-Pgr-103521	Puccinia graminis	35.74	5.00e-50	189.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	99.36	0.00e+00	641.00
IUUC-Rno-105717	Rattus norvegicus	35.53	8.00e-44	169.00
IUUC-Sha-107190	Sarcophilus harrisii	35.85	5.00e-44	169.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	52.67	1.00e-89	321.00
IUUC-Spo-108355	Schizosaccharomyces pombe	51.97	7.00e-91	325.00
IUUC-Smo-109374	Selaginella moellendorffii	38.23	1.00e-52	197.00
IUUC-Sit-110119	Setaria italica	33.58	1.00e-39	154.00
IUUC-Sly-111570	Solanum lycopersicum	31.50	1.00e-34	138.00
IUUC-Stu-112308	Solanum tuberosum	33.07	7.00e-41	159.00
IUUC-Sar-113515	Sorex araneus	33.33	3.00e-06	43.10
IUUC-Sbi-114605	Sorghum bicolor	33.94	3.00e-40	157.00
IUUC-Sre-114906	Sporisorium reilianum	46.18	1.00e-64	237.00
IUUC-Tgu-117087	Taeniopygia guttata	35.00	5.00e-40	155.00
IUUC-Tru-117700	Takifugu rubripes	34.25	5.00e-46	176.00
IUUC-Tni-120470	Tetraodon nigroviridis	35.53	7.00e-47	178.00
IUUC-Tca-121109	Theobroma cacao	36.97	9.00e-40	155.00
IUUC-Tre-122095	Trichoderma reesei	62.99	5.00e-112	395.00
IUUC-Tvi-122580	Trichoderma virens	62.99	6.00e-112	395.00
IUUC-Tae-125129	Triticum aestivum	35.74	4.00e-43	166.00
IUUC-Tur-126658	Triticum urartu	31.15	4.00e-35	140.00
IUUC-Tme-127043	Tuber melanosporum	68.95	6.00e-126	441.00
IUUC-Tbe-127927	Tupaia belangeri	35.53	1.00e-43	168.00
IUUC-Ttr-129231	Tursiops truncatus	35.53	9.00e-44	169.00
IUUC-Uma-129578	Ustilago maydis	46.88	4.00e-65	239.00
IUUC-Vda-129730	Verticillium dahliae	59.75	2.00e-115	407.00
IUUC-Vvi-130968	Vitis vinifera	35.34	4.00e-44	169.00
IUUC-Xtr-132203	Xenopus tropicalis	37.13	3.00e-47	179.00
IUUC-Xma-133972	Xiphophorus maculatus	35.53	5.00e-45	172.00
IUUC-Yli-134553	Yarrowia lipolytica	47.69	9.00e-73	265.00
IUUC-Zma-134941	Zea mays	33.21	7.00e-35	139.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence