iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017088

Ensembl Protein ID

Bra037051.1-P

UniProt Accession

M4F7J0; M4F7J0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra037051	Bra037051.1	Bra037051.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-25	87.7	674	703
UBD/Beta-Prp	4.00e-48	165.1	626	762

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht+ +t+++f ++ ++l+++s D+t++vWD
   Q: 674  HTAMITDVRFsPSlPRLATSSFDKTVRVWD 703
           88889******999**************** PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvv 140
           + s+   ++++t++ fs+dgk+l++++ D+ + +w  +t k+  tl++h++++++++fsps  +l++ s d+t+rvwd +++  +   + gh+++v
   Q: 626  VNSVRASTSKITSCHFSSDGKMLASAGHDKKAVIWHTDTMKPKTTLEEHTAMITDVRFSPSLPRLATSSFDKTVRVWDADNKGYSLRNFIGHSSMV 721
           233333333356666666666666666666666666666666666666666666666666556666666666666665554333333555666666 PP
   S: 141  ncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           +++ +hp++ +l+ s+ +D+ +r W++++g++ r  +g                                            ++
   Q: 722  TSLDFHPNKdDLICSCDNDGEIRYWSINNGSCTRVYKG-------------------------------------------GST 762
           66666665555666666666666666666666555555...........................................444 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDDSLLLSHQ VLCVSVLLSQ VYSSFWLTSV TIKAPPGKYP VCNTATFALD GLFLDVVKFD 60
VMLLFGELPW LNFSDIYNAY LVVLYYSYVV SVVYIATLNI VLGCNRLDVY IYDYLVKRDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGACT CTTTACTCTT GAGTCATCAG GTTTTATGTG TTAGTGTTTT ACTATCCCAA 60
GTTTACTCTT CCTTTTGGCT TACAAGTGTG ACTATAAAAG CTCCACCAGG AAAGTATCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	56.79	0.00e+00	791.00
IUUC-Atr-002973	Amborella trichopoda	70.25	0.00e+00	790.00
IUUC-Bol-015720	Brassica oleracea	97.25	0.00e+00	1217.00
IUUC-Gmo-039646	Gadus morhua	28.52	1.00e-22	100.00
IUUC-Mac-065234	Musa acuminata	61.42	0.00e+00	890.00
IUUC-Ppe-102018	Prunus persica	74.97	0.00e+00	934.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence