iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013562

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02046856

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000031810.3	ENSBTAT00000045099.1	ENSBTAP00000042513.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-39	132.7	116	152
UBD/Beta-Prp	1.20e-55	188.9	240	410

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH+  v++++f  +dt ++sGs+D+t+k+WD  +g  
   Q: 116  GHEHIVSSCNFcvDDTKVLSGSYDCTVKLWDAMDGSI 152
           8***********777****************887765 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls......tgk 85
            +k+hh   +t+ +f pd++ +a+ s d++ik+wdvt++++l ++ + h+++++ ++f  +g +l t+s D+t+k+w++        g 
   Q: 240  RIKDHHMMSLTACCFDPDSQRVASVSFDRSIKIWDVTSQTTLLTItKAHNNAISNCCFTFSGHFLCTSSWDKTLKIWNVHtgefrnRGA 328
           5899*************************************99999*******************************999888888999 PP
   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt 168
           cv  ++ghe  v s++f +++++lvsG+ d+t+ +wd+e+g+     l+gh+++v+ v+++ +++ + s+s+DrtvrlW+++ 
   Q: 329  CVTLMQGHEGCVSSCRFARDTSFLVSGGFDKTVAIWDVEEGYRKL-SLKGHNDWVMDVSISNNKKWILSASKDRTVRLWNIEE 410
           *********************************************.**********************************943 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MASQSSGTPS SSKKSSEDGK ETPQKSNLPL SLLHIRDVTH RRPSNLPWVD VVRACGRFRL 60
SLLQARRSRL LPSLNPLAVG DESPPPDTLW MPWMTQKALW GDQEPLSKIP FKIMRGHEHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCGTGGCC AGGCCGGGCT CCGAGATGGC CTCCCAGTCC TCGGGTACCC CCAGCTCCTC 60
AAAAAAATCC AGCGAGGATG GGAAAGAGAC GCCCCAGAAA AGTAACTTGC CGCTCTCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018391--PQQ_beta_propeller_repeat
IPR002372--PQQ_repeat
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13360--PQQ_2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00564--PQQ
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	80.18	5.00e-155	540.00
IUUC-Apl-003571	Anas platyrhynchos	56.39	1.00e-123	436.00
IUUC-Aca-005232	Anolis carolinensis	50.00	2.00e-78	285.00
IUUC-Ame-011833	Astyanax mexicanus	48.97	4.00e-54	203.00
IUUC-Cja-019202	Callithrix jacchus	71.59	0.00e+00	641.00
IUUC-Cfa-021095	Canis familiaris	71.88	0.00e+00	640.00
IUUC-Cpo-022170	Cavia porcellus	71.10	1.00e-179	622.00
IUUC-Csa-024218	Chlorocebus sabaeus	73.74	0.00e+00	660.00
IUUC-Cho-024561	Choloepus hoffmanni	74.56	5.00e-128	450.00
IUUC-Dno-029722	Dasypus novemcinctus	74.10	2.00e-155	541.00
IUUC-Dor-030464	Dipodomys ordii	66.77	2.00e-128	451.00
IUUC-Ete-032931	Echinops telfairi	59.17	3.00e-110	391.00
IUUC-Eca-034428	Equus caballus	84.83	0.00e+00	632.00
IUUC-Eeu-034568	Erinaceus europaeus	60.29	1.00e-120	425.00
IUUC-Fca-035707	Felis catus	69.40	2.00e-180	625.00
IUUC-Gmo-039646	Gadus morhua	43.73	1.00e-71	262.00
IUUC-Gga-040710	Gallus gallus	55.43	9.00e-115	406.00
IUUC-Ggo-044611	Gorilla gorilla	45.67	2.00e-95	342.00
IUUC-Hsa-046138	Homo sapiens	71.85	0.00e+00	645.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	66.59	4.00e-166	577.00
IUUC-Lch-050329	Latimeria chalumnae	51.28	1.00e-110	392.00
IUUC-Loc-052876	Lepisosteus oculatus	40.97	2.00e-31	128.00
IUUC-Laf-053777	Loxodonta africana	72.91	0.00e+00	654.00
IUUC-Mcc-055771	Macaca mulatta	73.08	0.00e+00	652.00
IUUC-Meu-056584	Macropus eugenii	47.28	3.00e-83	301.00
IUUC-Mga-059818	Meleagris gallopavo	53.63	6.00e-120	423.00
IUUC-Mmr-060639	Microcebus murinus	74.14	1.00e-157	548.00
IUUC-Mdo-062321	Monodelphis domestica	55.36	2.00e-135	475.00
IUUC-Mpu-066849	Mustela putorius furo	72.85	0.00e+00	629.00
IUUC-Mlu-067238	Myotis lucifugus	69.08	5.00e-170	590.00
IUUC-Ont-071230	Oreochromis niloticus	42.90	1.00e-80	293.00
IUUC-Oan-072698	Ornithorhynchus anatinus	62.50	2.00e-138	485.00
IUUC-Ocu-074219	Oryctolagus cuniculus	75.13	3.00e-171	594.00
IUUC-Oga-087913	Otolemur garnettii	66.90	5.00e-175	607.00
IUUC-Oar-089977	Ovis aries	94.44	0.00e+00	854.00
IUUC-Ptr-090876	Pan troglodytes	74.00	0.00e+00	650.00
IUUC-Pan-091936	Papio anubis	77.95	4.00e-114	404.00
IUUC-Psi-093015	Pelodiscus sinensis	52.40	1.00e-74	272.00
IUUC-Pma-094552	Petromyzon marinus	33.90	8.00e-32	129.00
IUUC-Pfo-096240	Poecilia formosa	42.59	6.00e-76	279.00
IUUC-Pab-097983	Pongo abelii	66.59	2.00e-164	571.00
IUUC-Pca-100752	Procavia capensis	59.09	3.00e-139	488.00
IUUC-Pva-102199	Pteropus vampyrus	69.09	7.00e-171	593.00
IUUC-Rno-106062	Rattus norvegicus	66.26	7.00e-168	583.00
IUUC-Sar-113167	Sorex araneus	53.96	1.00e-37	149.00
IUUC-Ssc-116089	Sus scrofa	78.12	0.00e+00	672.00
IUUC-Tur-126500	Triticum urartu	28.99	1.00e-22	100.00
IUUC-Tbe-127860	Tupaia belangeri	63.89	8.00e-163	566.00
IUUC-Ttr-129152	Tursiops truncatus	79.08	0.00e+00	650.00
IUUC-Vpa-130745	Vicugna pacos	69.25	0.00e+00	635.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence