iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	miRNAMap	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	41.92	6.00e-49	191.00	IUUC-Osa-086166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Mus musculus

Protein Sequence
(Fasta)

MAEQLSPGNS TRQVCTFLFK KPGRKGAAGR RKRRLCDAGS GDSCSSSDEG SSVVRPEKKQ 60
ATHNPMIQKT RGSAKQKATY GGLSSEDENE PEGLGVVYKS TRSAKPVGPE DMGATAVYEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGCGGTCCA GCAAGCGTTC CCGGACAGGA TTCTTTCTGT CGTCCTACTC CTCCTATCTG 60
ATCCGCTGCA TCAGAGACCA CCACGGAGTG TGACGACGCG AAGCGGTCCC GGACGTCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing

KEGG

mmu:69942

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000118	Aegilops tauschii	41.96	3.00e-51	195.00
IUUC-Aml-002002	Ailuropoda melanoleuca	83.05	7.00e-157	546.00
IUUC-Atr-003145	Amborella trichopoda	42.97	2.00e-52	199.00
IUUC-Apl-003440	Anas platyrhynchos	83.13	7.00e-124	436.00
IUUC-Aca-004421	Anolis carolinensis	79.73	2.00e-137	481.00
IUUC-Aly-006121	Arabidopsis lyrata	39.22	2.00e-55	209.00
IUUC-Ath-007493	Arabidopsis thaliana	44.87	5.00e-55	207.00
IUUC-Ang-009717	Aspergillus niger	38.93	3.00e-43	169.00
IUUC-Ame-011925	Astyanax mexicanus	73.55	6.00e-124	436.00
IUUC-Bdi-014084	Brachypodium distachyon	41.41	7.00e-51	194.00
IUUC-Bol-016607	Brassica oleracea	43.72	1.00e-53	203.00
IUUC-Bra-017747	Brassica rapa	38.76	2.00e-56	213.00
IUUC-Cfa-020902	Canis familiaris	85.88	2.00e-159	554.00
IUUC-Cre-022885	Chlamydomonas reinhardtii	39.39	6.00e-42	164.00
IUUC-Cho-024587	Choloepus hoffmanni	86.84	1.00e-132	465.00
IUUC-Cin-025328	Ciona intestinalis	72.32	5.00e-105	374.00
IUUC-Csv-026148	Ciona savignyi	70.59	7.00e-105	373.00
IUUC-Dre-027744	Danio rerio	69.38	8.00e-126	442.00
IUUC-Dse-031155	Dothistroma septosporum	47.55	2.00e-37	149.00
IUUC-Dme-031788	Drosophila melanogaster	61.48	8.00e-98	350.00
IUUC-Ete-033013	Echinops telfairi	88.71	1.00e-144	505.00
IUUC-Eca-033460	Equus caballus	87.46	3.00e-159	554.00
IUUC-Fca-035525	Felis catus	86.84	7.00e-164	569.00
IUUC-Fal-037206	Ficedula albicollis	82.51	4.00e-132	464.00
IUUC-Gmo-038718	Gadus morhua	67.81	2.00e-120	425.00
IUUC-Gga-041037	Gallus gallus	82.46	8.00e-136	476.00
IUUC-Gac-042103	Gasterosteus aculeatus	70.98	2.00e-123	435.00
IUUC-Hvu-047578	Hordeum vulgare	44.64	1.00e-23	101.00
IUUC-Itr-048102	Ictidomys tridecemlineatus	87.17	3.00e-166	577.00
IUUC-Lch-050488	Latimeria chalumnae	70.41	1.00e-137	482.00
IUUC-Lpe-051156	Leersia perrieri	42.11	4.00e-47	181.00
IUUC-Loc-052670	Lepisosteus oculatus	75.09	2.00e-132	464.00
IUUC-Laf-053570	Loxodonta africana	87.54	1.00e-168	585.00
IUUC-Mpo-057603	Magnaporthe poae	35.46	1.00e-39	156.00
IUUC-Mtr-058182	Medicago truncatula	48.23	4.00e-56	211.00
IUUC-Mga-059281	Meleagris gallopavo	83.71	4.00e-134	470.00
IUUC-Mac-065265	Musa acuminata	42.86	1.00e-47	183.00
IUUC-Mpu-066867	Mustela putorius furo	84.10	8.00e-157	546.00
IUUC-Mlu-067828	Myotis lucifugus	82.71	3.00e-155	541.00
IUUC-Ont-071497	Oreochromis niloticus	68.29	2.00e-127	448.00
IUUC-Oan-073182	Ornithorhynchus anatinus	77.36	1.00e-133	469.00
IUUC-Oba-075693	Oryza barthii	41.15	7.00e-47	181.00
IUUC-Obr-076128	Oryza brachyantha	41.67	2.00e-46	179.00
IUUC-Ogl-077323	Oryza glaberrima	41.15	7.00e-47	181.00
IUUC-Ogu-078766	Oryza glumaepatula	41.15	7.00e-47	181.00
IUUC-Oin-080054	Oryza indica	41.15	7.00e-47	181.00
IUUC-Ome-081331	Oryza meridionalis	39.57	1.00e-47	183.00
IUUC-Oni-082786	Oryza nivara	41.15	9.00e-47	180.00
IUUC-Opu-083855	Oryza punctata	42.28	3.00e-47	182.00
IUUC-Oru-084304	Oryza rufipogon	41.15	7.00e-47	181.00
IUUC-Osa-086166	Oryza sativa	41.15	7.00e-47	181.00
IUUC-Ola-086368	Oryzias latipes	65.75	2.00e-121	428.00
IUUC-Olu-087624	Ostreococcus lucimarinus	40.50	2.00e-46	178.00
IUUC-Psi-093790	Pelodiscus sinensis	84.70	3.00e-140	491.00
IUUC-Pma-094326	Petromyzon marinus	70.18	2.00e-121	428.00
IUUC-Pca-100687	Procavia capensis	85.88	6.00e-145	506.00
IUUC-Ppe-101155	Prunus persica	45.63	1.00e-55	209.00
IUUC-Pgr-103440	Puccinia graminis	41.41	3.00e-43	169.00
IUUC-Rno-105967	Rattus norvegicus	95.31	0.00e+00	645.00
IUUC-Sha-107587	Sarcophilus harrisii	70.66	4.00e-133	467.00
IUUC-Smo-109109	Selaginella moellendorffii	41.46	8.00e-51	194.00
IUUC-Sit-110234	Setaria italica	42.32	1.00e-48	187.00
IUUC-Sly-111790	Solanum lycopersicum	52.32	3.00e-44	171.00
IUUC-Sar-113374	Sorex araneus	84.80	2.00e-154	538.00
IUUC-Sbi-114766	Sorghum bicolor	42.45	2.00e-51	196.00
IUUC-Sre-115021	Sporisorium reilianum	38.82	1.00e-48	186.00
IUUC-Ssc-115474	Sus scrofa	88.63	4.00e-161	560.00
IUUC-Tgu-116649	Taeniopygia guttata	77.85	4.00e-140	490.00
IUUC-Tca-121278	Theobroma cacao	44.44	2.00e-44	173.00
IUUC-Tre-122006	Trichoderma reesei	32.86	5.00e-32	131.00
IUUC-Tae-122716	Triticum aestivum	41.96	5.00e-51	194.00
IUUC-Tur-126208	Triticum urartu	43.03	1.00e-50	193.00
IUUC-Tbe-127394	Tupaia belangeri	87.76	1.00e-159	555.00
IUUC-Vpa-130519	Vicugna pacos	85.71	9.00e-144	502.00
IUUC-Xtr-131923	Xenopus tropicalis	71.21	2.00e-133	468.00
IUUC-Yli-134518	Yarrowia lipolytica	49.29	2.00e-35	142.00
IUUC-Zma-135029	Zea mays	46.01	5.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence