iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104610

Ensembl Protein ID

EDU41329

UniProt Accession

B2VT55; B2VT55_PYRTR

Genbank Protein ID

EDU41329.1

Protein Name

Small nucleolar ribonucleoprotein complex subunit (SOF1)

Genbank Nucleotide ID

DS231615

Gene Name

PTRG_01891

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_01891	EDU41329	EDU41329

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-36	120.7	328	354
UBD/Beta-Prp	2.70e-40	137.7	157	360

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWD 29
           +v+++a+ +d ++++sGsdDg++++W+
   Q: 328  RVFSVAWsPDnKYVLSGSDDGNVRLWR 354
           6*******998***************9 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkl..lrsl..sgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdk 108
           t+v  +++ + +a+gs  + i ++d+++ +   ++sl   +  +++t+vkf++ +  il+++++Dr++ ++d +t++++h     ++ + +l+++p + + 
   Q: 157  TSVSHHRSLPTFAAGS--SVISIYDTSRTSGapVSSLvwPSAIDTITDVKFNQVETsILASCATDRAVILYDARTNSPLHRTV-LNFAANCLAWNPmEAYN 254
           5566666777788886..99*****99977678888866677789*******99878**********************9998.9***********777** PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
           ++++s+d    ++d+++     ++l+gh ++v++++++p+g  l++Gs+Dr +rlW  + g   +    +  ++v s++++++ k+++sgs+dg v+lw  
   Q: 255  FAVASEDHNGYIFDMRNMNRALQVLKGHVAAVMSIEFSPTGEELITGSYDRSIRLWERQKGHSRDVYHTKRMQRVFSVAWSPDNKYVLSGSDDGNVRLWRA 355
           *****************999999***********************************99999999977799****************************9 PP
   S: 210  qtgec 214
           +++e 
   Q: 356  RASER 360
           95543 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MKIKALSRST ASTQAPGSSI AKVTRNLDPN LHPFERAREY TRALNATKVE RMFAQPFLGD 60
FEPGHVDGVY SFAKDPNSLE CFASGSGDGV VKVWDLTSRE EKWQAQAHEN LVKGMCWTQD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGATCA AGGCCCTCAG CCGCTCGACG GCCTCTACGC AGGCGCCTGG CTCCAGTATC 60
GCGAAAGTCA CGAGAAACCT AGACCCGAAC CTCCACCCCT TCGAACGAGC GCGAGAATAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0072686--C:mitotic spindle
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0019013--C:viral nucleocapsid
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	42.44	1.00e-102	364.00
IUUC-Atr-002799	Amborella trichopoda	44.05	4.00e-104	369.00
IUUC-Apl-003675	Anas platyrhynchos	45.81	5.00e-106	375.00
IUUC-Aca-004792	Anolis carolinensis	43.62	7.00e-110	389.00
IUUC-Aly-005998	Arabidopsis lyrata	43.71	6.00e-102	362.00
IUUC-Ath-007526	Arabidopsis thaliana	42.83	7.00e-100	355.00
IUUC-Ago-007774	Ashbya gossypii	49.68	2.00e-131	461.00
IUUC-Acl-008024	Aspergillus clavatus	68.83	0.00e+00	667.00
IUUC-Afu-008930	Aspergillus fumigatus	63.01	0.00e+00	632.00
IUUC-Ani-009370	Aspergillus nidulans	67.34	0.00e+00	654.00
IUUC-Ang-009827	Aspergillus niger	66.44	0.00e+00	649.00
IUUC-Aor-010060	Aspergillus oryzae	65.85	0.00e+00	634.00
IUUC-Ate-010434	Aspergillus terreus	66.67	4.00e-155	538.00
IUUC-Ame-011967	Astyanax mexicanus	45.14	5.00e-112	395.00
IUUC-Bgr-011989	Blumeria graminis	66.14	0.00e+00	635.00
IUUC-Bta-013291	Bos taurus	33.41	6.00e-65	239.00
IUUC-Bci-013868	Botrytis cinerea	69.96	0.00e+00	664.00
IUUC-Bdi-014343	Brachypodium distachyon	43.26	9.00e-98	348.00
IUUC-Bol-015740	Brassica oleracea	41.41	7.00e-93	332.00
IUUC-Bra-016689	Brassica rapa	40.84	2.00e-93	334.00
IUUC-Cel-018536	Caenorhabditis elegans	39.12	8.00e-82	295.00
IUUC-Cja-018779	Callithrix jacchus	42.22	2.00e-104	370.00
IUUC-Cfa-020105	Canis familiaris	42.89	1.00e-105	374.00
IUUC-Cpo-021538	Cavia porcellus	43.78	1.00e-104	371.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	52.50	4.00e-45	171.00
IUUC-Csa-023492	Chlorocebus sabaeus	42.67	4.00e-105	373.00
IUUC-Cho-024497	Choloepus hoffmanni	38.00	2.00e-59	221.00
IUUC-Cin-025524	Ciona intestinalis	43.24	2.00e-103	367.00
IUUC-Csv-026197	Ciona savignyi	41.56	1.00e-101	361.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	61.69	3.00e-168	582.00
IUUC-Cne-026840	Cryptococcus neoformans	44.71	1.00e-71	263.00
IUUC-Cme-027111	Cyanidioschyzon merolae	35.31	1.00e-74	271.00
IUUC-Dre-027471	Danio rerio	43.68	1.00e-108	385.00
IUUC-Dno-029790	Dasypus novemcinctus	45.14	1.00e-89	321.00
IUUC-Dor-030971	Dipodomys ordii	34.96	5.00e-71	260.00
IUUC-Dse-031563	Dothistroma septosporum	64.43	5.00e-180	622.00
IUUC-Dme-032161	Drosophila melanogaster	42.73	5.00e-102	362.00
IUUC-Ete-033127	Echinops telfairi	40.58	5.00e-93	333.00
IUUC-Eca-033531	Equus caballus	43.59	9.00e-103	365.00
IUUC-Eeu-034663	Erinaceus europaeus	36.73	5.00e-82	296.00
IUUC-Fca-036258	Felis catus	42.89	8.00e-106	375.00
IUUC-Fal-037456	Ficedula albicollis	44.99	1.00e-107	381.00
IUUC-Fox-038025	Fusarium oxysporum	66.37	0.00e+00	642.00
IUUC-Fso-038344	Fusarium solani	66.59	8.00e-172	594.00
IUUC-Gmo-039643	Gadus morhua	43.36	9.00e-106	375.00
IUUC-Ggr-039816	Gaeumannomyces graminis	65.92	8.00e-172	594.00
IUUC-Gga-040143	Gallus gallus	44.47	1.00e-107	381.00
IUUC-Gac-041665	Gasterosteus aculeatus	44.34	5.00e-109	385.00
IUUC-Gma-043073	Glycine max	40.84	3.00e-98	350.00
IUUC-Ggo-045058	Gorilla gorilla	42.22	5.00e-104	369.00
IUUC-Hsa-046843	Homo sapiens	42.22	1.00e-103	369.00
IUUC-Hvu-047654	Hordeum vulgare	43.12	2.00e-58	217.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	42.67	5.00e-106	375.00
IUUC-Kpa-049232	Komagataella pastoris	50.66	9.00e-137	478.00
IUUC-Lch-050542	Latimeria chalumnae	45.79	1.00e-108	385.00
IUUC-Lpe-051622	Leersia perrieri	42.60	1.00e-99	354.00
IUUC-Loc-052674	Lepisosteus oculatus	43.79	1.00e-109	388.00
IUUC-Lma-053108	Leptosphaeria maculans	88.57	0.00e+00	860.00
IUUC-Laf-053385	Loxodonta africana	43.78	4.00e-105	373.00
IUUC-Mcc-055151	Macaca mulatta	42.44	1.00e-104	371.00
IUUC-Meu-056230	Macropus eugenii	43.52	3.00e-46	177.00
IUUC-Mor-057013	Magnaporthe oryzae	66.59	3.00e-172	595.00
IUUC-Mpo-057530	Magnaporthe poae	66.59	5.00e-173	598.00
IUUC-Mtr-058187	Medicago truncatula	42.83	1.00e-100	358.00
IUUC-Mla-058964	Melampsora laricipopulina	38.16	7.00e-92	329.00
IUUC-Mga-059712	Meleagris gallopavo	45.73	1.00e-107	381.00
IUUC-Mvi-060370	Microbotryum violaceum	40.31	3.00e-68	250.00
IUUC-Mmr-061340	Microcebus murinus	40.88	9.00e-100	355.00
IUUC-Mdo-062978	Monodelphis domestica	45.45	4.00e-111	393.00
IUUC-Mmu-063439	Mus musculus	44.44	3.00e-108	383.00
IUUC-Mac-065129	Musa acuminata	41.79	5.00e-105	372.00
IUUC-Mpu-066548	Mustela putorius furo	39.44	4.00e-79	286.00
IUUC-Mlu-067660	Myotis lucifugus	42.22	4.00e-104	369.00
IUUC-Nfi-068455	Neosartorya fischeri	66.37	0.00e+00	647.00
IUUC-Ncr-068848	Neurospora crassa	62.78	8.00e-167	578.00
IUUC-Nle-069923	Nomascus leucogenys	42.00	9.00e-104	369.00
IUUC-Opr-070279	Ochotona princeps	34.88	7.00e-28	116.00
IUUC-Ont-072234	Oreochromis niloticus	43.93	3.00e-111	393.00
IUUC-Oan-073713	Ornithorhynchus anatinus	41.87	2.00e-38	150.00
IUUC-Ocu-073782	Oryctolagus cuniculus	44.03	3.00e-108	383.00
IUUC-Oba-075161	Oryza barthii	42.83	4.00e-100	356.00
IUUC-Obr-076868	Oryza brachyantha	42.83	4.00e-100	356.00
IUUC-Ogl-077062	Oryza glaberrima	42.83	4.00e-100	356.00
IUUC-Ogu-078308	Oryza glumaepatula	42.83	4.00e-100	356.00
IUUC-Oin-079378	Oryza indica	42.83	4.00e-100	356.00
IUUC-Olo-080638	Oryza longistaminata	41.28	8.00e-92	328.00
IUUC-Oni-082368	Oryza nivara	42.83	4.00e-100	356.00
IUUC-Opu-083628	Oryza punctata	42.83	4.00e-100	356.00
IUUC-Oru-085226	Oryza rufipogon	42.60	1.00e-99	355.00
IUUC-Osa-085368	Oryza sativa	36.47	6.00e-44	169.00
IUUC-Ola-086836	Oryzias latipes	44.27	8.00e-111	392.00
IUUC-Olu-087755	Ostreococcus lucimarinus	39.59	2.00e-91	327.00
IUUC-Oga-088170	Otolemur garnettii	43.11	2.00e-107	380.00
IUUC-Oar-089388	Ovis aries	43.33	6.00e-107	379.00
IUUC-Ptr-090494	Pan troglodytes	42.22	7.00e-104	369.00
IUUC-Pan-091697	Papio anubis	42.67	8.00e-105	372.00
IUUC-Psi-093916	Pelodiscus sinensis	43.18	5.00e-104	369.00
IUUC-Pno-095004	Phaeosphaeria nodorum	81.61	0.00e+00	789.00
IUUC-Ppa-095514	Physcomitrella patens	43.05	7.00e-110	389.00
IUUC-Pfo-097432	Poecilia formosa	45.54	3.00e-110	390.00
IUUC-Pab-098423	Pongo abelii	42.44	7.00e-105	372.00
IUUC-Pop-099649	Populus trichocarpa	41.72	2.00e-105	374.00
IUUC-Pca-100365	Procavia capensis	41.98	9.00e-99	352.00
IUUC-Ppe-101350	Prunus persica	42.42	2.00e-104	370.00
IUUC-Pva-102845	Pteropus vampyrus	42.76	2.00e-104	370.00
IUUC-Pgr-103469	Puccinia graminis	37.65	7.00e-64	236.00
IUUC-Ptt-103980	Puccinia triticina	37.43	1.00e-64	238.00
IUUC-Pte-104111	Pyrenophora teres	98.88	0.00e+00	881.00
IUUC-Rno-105082	Rattus norvegicus	43.75	3.00e-108	383.00
IUUC-Sce-106340	Saccharomyces cerevisiae	48.72	6.00e-130	455.00
IUUC-Sha-106584	Sarcophilus harrisii	44.12	4.00e-110	389.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	51.12	1.00e-125	441.00
IUUC-Spo-108046	Schizosaccharomyces pombe	51.47	8.00e-132	461.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	70.18	0.00e+00	665.00
IUUC-Smo-109548	Selaginella moellendorffii	43.93	2.00e-109	387.00
IUUC-Sit-110242	Setaria italica	42.16	4.00e-98	349.00
IUUC-Sly-111762	Solanum lycopersicum	42.83	6.00e-99	352.00
IUUC-Stu-112156	Solanum tuberosum	42.60	2.00e-99	354.00
IUUC-Sbi-114739	Sorghum bicolor	41.94	9.00e-99	352.00
IUUC-Sre-114951	Sporisorium reilianum	42.38	4.00e-111	393.00
IUUC-Ssc-115510	Sus scrofa	42.89	1.00e-105	375.00
IUUC-Tgu-117234	Taeniopygia guttata	46.48	1.00e-106	378.00
IUUC-Tru-117986	Takifugu rubripes	43.76	2.00e-108	384.00
IUUC-Tsy-119252	Tarsius syrichta	42.96	6.00e-98	349.00
IUUC-Tni-119785	Tetraodon nigroviridis	45.10	5.00e-103	366.00
IUUC-Tca-121222	Theobroma cacao	43.05	3.00e-101	360.00
IUUC-Tre-122243	Trichoderma reesei	65.02	2.00e-180	622.00
IUUC-Tvi-122293	Trichoderma virens	65.25	0.00e+00	627.00
IUUC-Tae-125191	Triticum aestivum	41.28	1.00e-94	338.00
IUUC-Tur-126098	Triticum urartu	39.91	2.00e-86	311.00
IUUC-Tme-127200	Tuber melanosporum	58.80	2.00e-158	550.00
IUUC-Tbe-127568	Tupaia belangeri	37.66	1.00e-45	176.00
IUUC-Ttr-129185	Tursiops truncatus	38.22	8.00e-88	315.00
IUUC-Uma-129353	Ustilago maydis	42.80	1.00e-111	394.00
IUUC-Vda-129768	Verticillium dahliae	63.47	4.00e-177	612.00
IUUC-Vpa-130572	Vicugna pacos	42.89	2.00e-106	378.00
IUUC-Vvi-131555	Vitis vinifera	42.38	4.00e-101	359.00
IUUC-Xtr-132263	Xenopus tropicalis	45.38	5.00e-92	329.00
IUUC-Xma-133925	Xiphophorus maculatus	44.62	3.00e-108	383.00
IUUC-Yli-134384	Yarrowia lipolytica	50.12	1.00e-128	451.00
IUUC-Zma-135616	Zea mays	41.72	1.00e-96	344.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence