iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-133971

Ensembl Protein ID

ENSXMAP00000015817.1

UniProt Accession

M4AMX2; M4AMX2_XIPMA

Genbank Protein ID

ENSXMAP00000015817

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01035492

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000015785.1	ENSXMAT00000015840.1	ENSXMAP00000015817.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.50e-13	48.1	407	456
E3 activity/RING/RING	6.00e-12	45.9	111	151

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
           p ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++++l+e 
   Q: 407  PTDLECSLCMRLFYEPVTTPCGHTFCLQCLERCLDHNPK-CPLCKEELSEY 456
           67899*********************************9.********654 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iCl+ +++ p++lpCgH+f+++Cl++     +++ +   C  C
   Q: 111  CGICLSFLFE-PVTLPCGHCFCKKCLERE---RKEKERPVVCKEC 151
           9*********.9**************665...2234444456666 PP

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

MLHLAAEAFR ANNFELAADI YECQLACALD PGSRLELMVK RADALAFGGK VAEAFEVYRQ 60
ASEIDKLKPA HLSNLVGYLS DSIRRQDRGG SLGSRWRTGS GSGSGFEDFS CGICLSFLFE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTGAACAA GTCAAATTTA CTTTAGCCAT GCAATATTCT TATGTGTGAA TGGCTCAGTC 60
AAAGTCCAGA CAAATCTAAC TAAAACTCTG TGGGAAGGCT TGAAAATTTC ACCTACCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR003613--Ubox_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001774	Ailuropoda melanoleuca	69.67	4.00e-129	455.00
IUUC-Ame-010881	Astyanax mexicanus	57.73	0.00e+00	762.00
IUUC-Bta-012872	Bos taurus	48.88	7.00e-175	607.00
IUUC-Cpo-022041	Cavia porcellus	46.63	5.00e-158	551.00
IUUC-Csa-024034	Chlorocebus sabaeus	48.33	1.00e-168	586.00
IUUC-Cin-025668	Ciona intestinalis	32.28	1.00e-94	340.00
IUUC-Cne-026875	Cryptococcus neoformans	29.07	1.00e-08	55.50
IUUC-Dno-029518	Dasypus novemcinctus	47.63	4.00e-153	535.00
IUUC-Dor-031132	Dipodomys ordii	49.19	3.00e-168	585.00
IUUC-Eca-033382	Equus caballus	49.86	3.00e-176	612.00
IUUC-Fca-035777	Felis catus	53.04	1.00e-135	476.00
IUUC-Gmo-039110	Gadus morhua	61.53	0.00e+00	844.00
IUUC-Gga-041187	Gallus gallus	51.48	0.00e+00	726.00
IUUC-Gac-042201	Gasterosteus aculeatus	71.45	0.00e+00	991.00
IUUC-Ggo-045111	Gorilla gorilla	48.59	3.00e-169	588.00
IUUC-Hsa-045695	Homo sapiens	48.59	9.00e-169	587.00
IUUC-Lch-050429	Latimeria chalumnae	52.87	0.00e+00	749.00
IUUC-Loc-051823	Lepisosteus oculatus	61.68	0.00e+00	835.00
IUUC-Mcc-055249	Macaca mulatta	53.11	1.00e-131	463.00
IUUC-Mga-060131	Meleagris gallopavo	57.03	2.00e-165	575.00
IUUC-Mmr-060749	Microcebus murinus	49.71	6.00e-177	614.00
IUUC-Mdo-062261	Monodelphis domestica	66.56	8.00e-130	457.00
IUUC-Mmu-063219	Mus musculus	70.57	3.00e-123	436.00
IUUC-Mpu-066222	Mustela putorius furo	45.07	7.00e-156	544.00
IUUC-Mlu-067769	Myotis lucifugus	49.15	2.00e-173	602.00
IUUC-Nle-069738	Nomascus leucogenys	54.95	9.00e-159	553.00
IUUC-Ont-072029	Oreochromis niloticus	71.72	0.00e+00	956.00
IUUC-Ocu-074884	Oryctolagus cuniculus	47.21	1.00e-164	573.00
IUUC-Ola-086698	Oryzias latipes	76.67	0.00e+00	1034.00
IUUC-Oga-089109	Otolemur garnettii	48.02	3.00e-173	602.00
IUUC-Oar-089903	Ovis aries	49.51	2.00e-175	609.00
IUUC-Ptr-091238	Pan troglodytes	48.58	2.00e-167	582.00
IUUC-Pan-092379	Papio anubis	48.27	2.00e-173	603.00
IUUC-Pfo-097284	Poecilia formosa	96.31	0.00e+00	1323.00
IUUC-Pab-098343	Pongo abelii	48.18	6.00e-174	604.00
IUUC-Pca-100905	Procavia capensis	48.07	9.00e-141	493.00
IUUC-Pva-102242	Pteropus vampyrus	46.43	1.00e-150	526.00
IUUC-Rno-105899	Rattus norvegicus	48.72	2.00e-177	616.00
IUUC-Sha-107565	Sarcophilus harrisii	47.55	2.00e-166	579.00
IUUC-Spo-108344	Schizosaccharomyces pombe	28.66	1.00e-24	107.00
IUUC-Ssc-115705	Sus scrofa	50.58	5.00e-177	614.00
IUUC-Tgu-116978	Taeniopygia guttata	57.26	0.00e+00	691.00
IUUC-Tsy-118988	Tarsius syrichta	53.92	1.00e-152	533.00
IUUC-Ttr-128875	Tursiops truncatus	69.51	5.00e-125	441.00
IUUC-Vpa-130779	Vicugna pacos	69.58	4.00e-117	414.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence