iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-022150

Ensembl Protein ID

ENSCPOP00000002058.2

UniProt Accession

H0UY57; H0UY57_CAVPO

Genbank Protein ID

ENSCPOP00000002058

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02007357

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000002267.3	ENSCPOT00000002299.2	ENSCPOP00000002058.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	99.67	2.00e-176	615.00	IUUC-Hsa-046680
UBD/Other/Other	99.67	2.00e-176	615.00	IUUC-Hsa-046680
UBD/Other/Other	37.35	4.00e-52	199.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cavia porcellus

Protein Sequence
(Fasta)

FSFNMFDHPI PRVFQNRFST QYRCFSVSML AGPNDRSDVE KGGKIIMPPS ALDQLSRLNI 60
TYPMLFKLTN KNSDRMTHCG VLEFVADEGI CYLPHWMMQN LLLEEGGLVQ VESVNLQVAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTCTTTCA ACATGTTCGA CCACCCAATT CCCCGGGTCT TCCAGAACCG CTTCTCCACA 60
CAATACCGCT GCTTCTCTGT GTCCATGCTC GCAGGGCCTA ATGACAGGTC AGATGTGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	51.80	2.00e-66	245.00
IUUC-Aml-001398	Ailuropoda melanoleuca	99.67	8.00e-178	615.00
IUUC-Atr-002449	Amborella trichopoda	48.84	6.00e-56	210.00
IUUC-Apl-004065	Anas platyrhynchos	92.75	2.00e-142	498.00
IUUC-Aca-004973	Anolis carolinensis	92.81	2.00e-171	594.00
IUUC-Aly-005501	Arabidopsis lyrata	51.71	6.00e-67	247.00
IUUC-Ath-007324	Arabidopsis thaliana	52.61	1.00e-67	249.00
IUUC-Ago-007918	Ashbya gossypii	38.20	3.00e-54	205.00
IUUC-Acl-008362	Aspergillus clavatus	42.64	7.00e-67	247.00
IUUC-Afl-008690	Aspergillus flavus	53.95	8.00e-64	237.00
IUUC-Afu-008787	Aspergillus fumigatus	43.54	9.00e-66	243.00
IUUC-Ani-009385	Aspergillus nidulans	56.57	4.00e-57	215.00
IUUC-Ang-009709	Aspergillus niger	56.22	4.00e-64	238.00
IUUC-Aor-010240	Aspergillus oryzae	53.95	8.00e-64	237.00
IUUC-Ate-010551	Aspergillus terreus	53.33	1.00e-64	240.00
IUUC-Ame-011417	Astyanax mexicanus	88.93	1.00e-158	552.00
IUUC-Bgr-011986	Blumeria graminis	56.25	6.00e-62	230.00
IUUC-Bta-012559	Bos taurus	96.90	6.00e-127	446.00
IUUC-Bci-013767	Botrytis cinerea	56.08	4.00e-58	218.00
IUUC-Bdi-014336	Brachypodium distachyon	52.00	3.00e-65	241.00
IUUC-Bol-015824	Brassica oleracea	44.41	2.00e-66	246.00
IUUC-Bra-016732	Brassica rapa	44.09	2.00e-66	245.00
IUUC-Cel-018590	Caenorhabditis elegans	40.47	1.00e-49	189.00
IUUC-Cja-019487	Callithrix jacchus	99.02	4.00e-177	613.00
IUUC-Cfa-020497	Canis familiaris	99.35	4.00e-177	613.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	50.66	2.00e-58	218.00
IUUC-Csa-023602	Chlorocebus sabaeus	99.67	1.00e-177	615.00
IUUC-Cin-025594	Ciona intestinalis	57.38	9.00e-93	333.00
IUUC-Csv-026040	Ciona savignyi	54.95	2.00e-94	338.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	48.15	5.00e-52	197.00
IUUC-Cne-026990	Cryptococcus neoformans	42.49	2.00e-39	156.00
IUUC-Cme-027323	Cyanidioschyzon merolae	33.22	2.00e-42	166.00
IUUC-Dre-027987	Danio rerio	86.64	3.00e-153	533.00
IUUC-Dor-030294	Dipodomys ordii	97.39	2.00e-173	601.00
IUUC-Dse-031411	Dothistroma septosporum	38.24	5.00e-57	214.00
IUUC-Dme-031798	Drosophila melanogaster	55.56	1.00e-92	332.00
IUUC-Ete-032432	Echinops telfairi	97.71	2.00e-174	604.00
IUUC-Eca-034427	Equus caballus	99.67	1.00e-177	615.00
IUUC-Eeu-034917	Erinaceus europaeus	70.59	8.00e-111	392.00
IUUC-Fca-035380	Felis catus	99.35	4.00e-177	613.00
IUUC-Fal-037659	Ficedula albicollis	94.04	4.00e-168	583.00
IUUC-Fox-038062	Fusarium oxysporum	44.90	4.00e-21	94.00
IUUC-Fso-038111	Fusarium solani	35.96	4.00e-53	202.00
IUUC-Gmo-039298	Gadus morhua	86.73	9.00e-147	512.00
IUUC-Ggr-039771	Gaeumannomyces graminis	51.03	3.00e-56	212.00
IUUC-Gga-040313	Gallus gallus	94.77	2.00e-171	594.00
IUUC-Gac-042009	Gasterosteus aculeatus	85.76	6.00e-147	513.00
IUUC-Gma-043844	Glycine max	52.28	2.00e-67	249.00
IUUC-Ggo-044639	Gorilla gorilla	89.18	1.00e-172	598.00
IUUC-Hsa-046680	Homo sapiens	99.67	1.00e-177	615.00
IUUC-Hvu-047614	Hordeum vulgare	51.80	2.00e-66	245.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	99.67	8.00e-178	615.00
IUUC-Kpa-049136	Komagataella pastoris	36.89	9.00e-56	210.00
IUUC-Lch-050607	Latimeria chalumnae	88.41	1.00e-155	541.00
IUUC-Lpe-050726	Leersia perrieri	50.23	2.00e-61	229.00
IUUC-Loc-051848	Lepisosteus oculatus	89.29	1.00e-160	558.00
IUUC-Lma-053187	Leptosphaeria maculans	41.34	1.00e-64	239.00
IUUC-Laf-053569	Loxodonta africana	97.73	3.00e-174	603.00
IUUC-Mcc-055275	Macaca mulatta	99.35	6.00e-177	612.00
IUUC-Mor-056967	Magnaporthe oryzae	50.00	8.00e-57	214.00
IUUC-Mpo-057399	Magnaporthe poae	51.55	1.00e-56	213.00
IUUC-Mtr-058353	Medicago truncatula	51.30	2.00e-65	242.00
IUUC-Mla-058830	Melampsora laricipopulina	44.56	1.00e-42	167.00
IUUC-Mga-059803	Meleagris gallopavo	93.89	7.00e-144	502.00
IUUC-Mvi-060456	Microbotryum violaceum	46.81	2.00e-45	176.00
IUUC-Mmr-060573	Microcebus murinus	99.35	3.00e-177	613.00
IUUC-Mdo-062831	Monodelphis domestica	96.73	5.00e-174	602.00
IUUC-Mmu-064302	Mus musculus	98.37	1.00e-175	608.00
IUUC-Mac-064745	Musa acuminata	51.72	1.00e-65	243.00
IUUC-Mpu-065922	Mustela putorius furo	99.35	2.00e-177	614.00
IUUC-Mlu-068236	Myotis lucifugus	98.38	5.00e-176	609.00
IUUC-Nfi-068417	Neosartorya fischeri	43.54	9.00e-66	243.00
IUUC-Ncr-068747	Neurospora crassa	40.75	5.00e-54	204.00
IUUC-Nle-069948	Nomascus leucogenys	88.92	7.00e-173	599.00
IUUC-Opr-070919	Ochotona princeps	84.00	5.00e-140	489.00
IUUC-Ont-071467	Oreochromis niloticus	86.41	1.00e-152	532.00
IUUC-Oan-073436	Ornithorhynchus anatinus	76.36	2.00e-69	254.00
IUUC-Ocu-074427	Oryctolagus cuniculus	97.71	1.00e-167	581.00
IUUC-Oba-075440	Oryza barthii	51.27	3.00e-66	244.00
IUUC-Obr-076275	Oryza brachyantha	51.15	7.00e-60	223.00
IUUC-Ogl-077237	Oryza glaberrima	51.27	4.00e-66	244.00
IUUC-Ogu-078934	Oryza glumaepatula	51.05	3.00e-66	245.00
IUUC-Oin-079475	Oryza indica	51.90	8.00e-67	246.00
IUUC-Olo-080285	Oryza longistaminata	59.64	7.00e-57	213.00
IUUC-Ome-081887	Oryza meridionalis	51.05	4.00e-66	244.00
IUUC-Oni-082064	Oryza nivara	51.69	1.00e-66	246.00
IUUC-Opu-083610	Oryza punctata	50.85	5.00e-66	244.00
IUUC-Oru-084911	Oryza rufipogon	44.13	9.00e-67	246.00
IUUC-Osa-085366	Oryza sativa	51.27	3.00e-66	244.00
IUUC-Ola-086846	Oryzias latipes	76.08	3.00e-138	484.00
IUUC-Olu-087879	Ostreococcus lucimarinus	45.49	6.00e-57	214.00
IUUC-Oga-089017	Otolemur garnettii	98.06	9.00e-175	605.00
IUUC-Oar-089970	Ovis aries	94.12	5.00e-167	580.00
IUUC-Ptr-091147	Pan troglodytes	90.26	8.00e-162	562.00
IUUC-Pan-091757	Papio anubis	91.88	1.00e-158	552.00
IUUC-Psi-093931	Pelodiscus sinensis	95.10	7.00e-172	595.00
IUUC-Pno-094775	Phaeosphaeria nodorum	48.17	1.00e-58	220.00
IUUC-Ppa-095156	Physcomitrella patens	51.79	1.00e-63	236.00
IUUC-Pfo-097295	Poecilia formosa	85.48	2.00e-151	528.00
IUUC-Pab-098537	Pongo abelii	99.67	1.00e-177	615.00
IUUC-Pop-099436	Populus trichocarpa	49.60	3.00e-67	248.00
IUUC-Pca-100631	Procavia capensis	86.34	9.00e-165	572.00
IUUC-Ppe-101259	Prunus persica	50.86	2.00e-66	246.00
IUUC-Pva-102679	Pteropus vampyrus	90.61	2.00e-158	551.00
IUUC-Pgr-103475	Puccinia graminis	45.59	6.00e-45	174.00
IUUC-Ptt-104012	Puccinia triticina	38.73	2.00e-32	132.00
IUUC-Pte-104071	Pyrenophora teres	50.95	3.00e-61	228.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	50.95	3.00e-61	228.00
IUUC-Rno-104858	Rattus norvegicus	98.37	1.00e-175	608.00
IUUC-Sce-106174	Saccharomyces cerevisiae	39.02	1.00e-54	206.00
IUUC-Sha-107075	Sarcophilus harrisii	96.73	2.00e-174	604.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	43.67	5.00e-60	224.00
IUUC-Spo-108259	Schizosaccharomyces pombe	45.92	4.00e-52	198.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	39.35	2.00e-51	196.00
IUUC-Smo-109290	Selaginella moellendorffii	53.28	5.00e-66	244.00
IUUC-Sit-109992	Setaria italica	51.06	1.00e-65	243.00
IUUC-Sly-110858	Solanum lycopersicum	51.57	3.00e-63	234.00
IUUC-Stu-112028	Solanum tuberosum	55.80	1.00e-58	219.00
IUUC-Sar-113061	Sorex araneus	99.02	2.00e-176	610.00
IUUC-Sbi-114882	Sorghum bicolor	44.27	7.00e-66	243.00
IUUC-Sre-115104	Sporisorium reilianum	47.12	2.00e-44	173.00
IUUC-Ssc-115403	Sus scrofa	98.69	2.00e-176	610.00
IUUC-Tgu-117013	Taeniopygia guttata	94.44	4.00e-171	593.00
IUUC-Tru-118307	Takifugu rubripes	86.69	2.00e-148	518.00
IUUC-Tsy-119309	Tarsius syrichta	88.73	2.00e-68	252.00
IUUC-Tni-120209	Tetraodon nigroviridis	86.04	5.00e-146	509.00
IUUC-Tca-121421	Theobroma cacao	51.30	3.00e-67	248.00
IUUC-Tre-122235	Trichoderma reesei	45.88	1.00e-51	197.00
IUUC-Tvi-122421	Trichoderma virens	45.81	2.00e-52	199.00
IUUC-Tae-124587	Triticum aestivum	51.80	1.00e-66	246.00
IUUC-Tur-126353	Triticum urartu	37.50	4.00e-25	109.00
IUUC-Tme-126918	Tuber melanosporum	53.65	5.00e-59	221.00
IUUC-Ttr-129286	Tursiops truncatus	88.99	1.00e-160	558.00
IUUC-Uma-129404	Ustilago maydis	48.17	1.00e-45	177.00
IUUC-Vda-129746	Verticillium dahliae	48.47	3.00e-53	202.00
IUUC-Vpa-130648	Vicugna pacos	100.00	2.00e-24	106.00
IUUC-Vvi-131301	Vitis vinifera	52.17	2.00e-66	245.00
IUUC-Xtr-132583	Xenopus tropicalis	90.85	3.00e-163	567.00
IUUC-Xma-133129	Xiphophorus maculatus	85.81	2.00e-151	528.00
IUUC-Yli-134515	Yarrowia lipolytica	46.43	4.00e-51	195.00
IUUC-Zma-135266	Zea mays	43.53	1.00e-65	243.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence