iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000015621.7	ENSRNOT00000066974.2	ENSRNOP00000060879.1
ENSRNOG00000015621.7	ENSRNOT00000088458.1	ENSRNOP00000071250.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.70e-09	37.4	709	753

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek.CrewfHpaClklsveeelpnsekwiCpkCr 52
           +vC vC+++g+   slv Ce  C++ fHp+Cl+l+    +p+   ++C++C+
   Q: 709  TVCQVCENTGD---SLVACEGeCCRHFHPECLGLA---AVPEGR-FTCEECE 753
           79*********...5********************...999996.******7 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MDFSFSFMQG IMGNTIQQPP QLIDSANIRQ EDAFDNNSDI VEDGGPTPFE ATLQQGFQCP 60
PATEDLPPLT NGYPPSISLY ETQTKYPPYS QYPNGSANGF GAVRNFSPTD YYHSEIPNTR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTCGCTGT GGCCCGCGGC CCGGGATGCA GTCGCGCTGA CGTCCTCCTG GTTACCCACA 60
AGCCTCTGTA CCCCAGTGCG GGCAGGAAGA GGGCAACCGG GTCCAGTGCC TGCCCGGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0949--S-adenosyl-L-methionine
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR006560--AWS_dom
IPR003616--Post-SET_dom
IPR000313--PWWP_dom
IPR001214--SET_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51215--AWS
PS50868--POST_SET
PS50812--PWWP
PS50280--SET
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00855--PWWP
PF00856--SET

SMART

SM00570--AWS
SM00249--PHD
SM00508--PostSET
SM00293--PWWP
SM00317--SET

Gene Ontology

GO:0005634--C:nucleus
GO:0018024--F:histone-lysine N-methyltransferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001809	Ailuropoda melanoleuca	88.56	0.00e+00	1641.00
IUUC-Apl-004027	Anas platyrhynchos	74.26	0.00e+00	1991.00
IUUC-Aca-005380	Anolis carolinensis	78.00	0.00e+00	2123.00
IUUC-Ame-011234	Astyanax mexicanus	58.87	0.00e+00	1433.00
IUUC-Bta-013575	Bos taurus	86.86	0.00e+00	2458.00
IUUC-Bdi-014781	Brachypodium distachyon	32.93	8.00e-14	72.40
IUUC-Cja-020013	Callithrix jacchus	89.55	0.00e+00	2579.00
IUUC-Cfa-021060	Canis familiaris	88.93	0.00e+00	2494.00
IUUC-Cpo-021834	Cavia porcellus	87.40	0.00e+00	2443.00
IUUC-Csa-023370	Chlorocebus sabaeus	89.27	0.00e+00	2573.00
IUUC-Cho-025058	Choloepus hoffmanni	78.12	0.00e+00	998.00
IUUC-Dre-027664	Danio rerio	58.93	0.00e+00	1461.00
IUUC-Dno-029302	Dasypus novemcinctus	87.42	0.00e+00	2452.00
IUUC-Eca-033626	Equus caballus	86.61	0.00e+00	2457.00
IUUC-Fca-035556	Felis catus	88.52	0.00e+00	2523.00
IUUC-Fal-037101	Ficedula albicollis	78.61	0.00e+00	2137.00
IUUC-Gmo-038901	Gadus morhua	55.66	0.00e+00	1521.00
IUUC-Gga-040366	Gallus gallus	79.09	0.00e+00	2114.00
IUUC-Gac-042047	Gasterosteus aculeatus	60.35	0.00e+00	1367.00
IUUC-Ggo-044695	Gorilla gorilla	86.54	0.00e+00	2439.00
IUUC-Hsa-046080	Homo sapiens	90.03	0.00e+00	2574.00
IUUC-Itr-048622	Ictidomys tridecemlineatus	88.72	0.00e+00	2518.00
IUUC-Lch-050544	Latimeria chalumnae	68.46	0.00e+00	1621.00
IUUC-Loc-052656	Lepisosteus oculatus	63.13	0.00e+00	1595.00
IUUC-Laf-054112	Loxodonta africana	87.86	0.00e+00	2485.00
IUUC-Mcc-054956	Macaca mulatta	89.76	0.00e+00	2576.00
IUUC-Meu-056051	Macropus eugenii	80.35	0.00e+00	2096.00
IUUC-Mga-060139	Meleagris gallopavo	81.31	0.00e+00	2185.00
IUUC-Mmr-060789	Microcebus murinus	88.30	0.00e+00	2538.00
IUUC-Mdo-062908	Monodelphis domestica	84.13	0.00e+00	2368.00
IUUC-Mmu-063165	Mus musculus	91.29	0.00e+00	2501.00
IUUC-Mpu-066002	Mustela putorius furo	89.27	0.00e+00	2519.00
IUUC-Nle-069417	Nomascus leucogenys	88.51	0.00e+00	2392.00
IUUC-Ont-071900	Oreochromis niloticus	57.70	0.00e+00	1598.00
IUUC-Oan-072857	Ornithorhynchus anatinus	85.14	0.00e+00	2377.00
IUUC-Ocu-073809	Oryctolagus cuniculus	88.54	0.00e+00	2503.00
IUUC-Ola-087085	Oryzias latipes	58.29	0.00e+00	1580.00
IUUC-Oga-088289	Otolemur garnettii	88.72	0.00e+00	2488.00
IUUC-Oar-089398	Ovis aries	87.90	0.00e+00	2471.00
IUUC-Ptr-090510	Pan troglodytes	89.82	0.00e+00	2568.00
IUUC-Pan-092291	Papio anubis	89.27	0.00e+00	2573.00
IUUC-Psi-093547	Pelodiscus sinensis	81.67	0.00e+00	2246.00
IUUC-Pma-094747	Petromyzon marinus	55.85	0.00e+00	935.00
IUUC-Pfo-096669	Poecilia formosa	57.89	0.00e+00	1582.00
IUUC-Pab-097727	Pongo abelii	89.00	0.00e+00	2548.00
IUUC-Pca-100474	Procavia capensis	81.25	0.00e+00	2191.00
IUUC-Pva-102539	Pteropus vampyrus	87.17	0.00e+00	2213.00
IUUC-Sha-107287	Sarcophilus harrisii	85.56	0.00e+00	2361.00
IUUC-Sar-113547	Sorex araneus	83.77	0.00e+00	2375.00
IUUC-Ssc-116208	Sus scrofa	88.65	0.00e+00	2551.00
IUUC-Tgu-117006	Taeniopygia guttata	81.00	0.00e+00	2232.00
IUUC-Tru-118375	Takifugu rubripes	61.82	0.00e+00	1437.00
IUUC-Tsy-119323	Tarsius syrichta	88.72	0.00e+00	2523.00
IUUC-Tni-120509	Tetraodon nigroviridis	58.46	0.00e+00	1608.00
IUUC-Ttr-128240	Tursiops truncatus	85.19	0.00e+00	2418.00
IUUC-Vpa-130666	Vicugna pacos	88.10	0.00e+00	2462.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence